Hscr030134.1
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- Zfy1
- Assembly
- GCA_949316085.1
- Location
- OX438992.1:2599721-2603926[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.042 4.5 9.0 7.1 1 23 149 172 149 172 0.95 2 17 0.0004 0.043 15.3 1.5 1 23 181 204 181 204 0.96 3 17 0.014 1.5 10.5 0.4 2 23 217 239 217 239 0.97 4 17 0.00037 0.039 15.4 1.4 1 23 248 271 248 271 0.97 5 17 0.0032 0.34 12.5 3.2 1 23 283 306 283 306 0.96 6 17 0.00014 0.015 16.8 0.7 2 23 338 360 337 360 0.97 7 17 0.0014 0.14 13.6 1.2 2 23 370 392 369 392 0.96 8 17 0.13 14 7.4 1.7 3 20 398 415 396 417 0.90 9 17 0.00074 0.078 14.5 0.5 2 21 422 441 421 444 0.94 10 17 0.064 6.8 8.4 1.8 3 23 454 475 453 475 0.96 11 17 0.00031 0.033 15.7 3.0 1 23 480 503 480 503 0.94 12 17 0.00026 0.028 15.9 3.1 2 23 515 537 514 537 0.96 13 17 0.065 6.9 8.4 2.8 1 23 561 584 561 585 0.94 14 17 0.29 31 6.3 0.1 2 23 591 612 590 612 0.93 15 17 0.039 4.2 9.1 2.4 2 23 618 639 617 639 0.98 16 17 0.015 1.6 10.3 0.2 1 23 705 727 705 727 0.97 17 17 0.31 33 6.2 2.8 1 23 733 756 733 756 0.97
Sequence Information
- Coding Sequence
- ATGGCAGATAATGGAATTAAAGTAGAAGTAAAAGTTGAAAGAAAAGATCCTACCTCATTTTTGCCTGAAGAGCCGATGtcttatgaaattaaaaagaaaaaaaagaaaaagaaaaaaaaagatattgaagATCCATTTAAGgatattgatgatgaaatgGACATGAAACCTACAATAACAGAAATAATACCGCCAGCTTTTGACCCAgaagttaatattaaagttgaaAAAATTGAAGTTGAATTAGATTTTCatgattttacaGATAACACAGGTCTCATGTTAGAGGGCCCGGACAGTGAGGACAGCCAGGAGCCAGCTGTAAAGATTGAGAACCAAAACCACGAAGCCGTCTTGCTTACTTTTGAAAGCGTAGTcaatccaaaaaaaatattaccttccAAAGAAATAGGCCTTCCTATCGATATCGTACCAAAAGCTGAACACTTTTGTAAAATATGCCATTTGGTCTTTCAATCAACAAAAACATTAAGAATGCATCAGAAGAGGAAACACAAAGTGTTTAGAAAGTCGTTTAAACATATTTGCGATTACTGCAGTATGTCCTATGAAACGAAAAACAGTTTAGTTGCCCATATAAAACGTAAACATGGACCAGATTCGTTGCCAGATGATAAAGAAGAAAGAACATGCGAGATATGCGCATTAGTGTTTAAAGGCATGGCCAGGTTACGTATGCATATGAGACGGAAACATGGATCGTTCCAGGATTCCTTCAAACATGTATGTAAGGACTGCGGTCTGACTTATGATAAATATAGAAGTTTAATAGTTCATATACAACGTAAACATTCAAATCAAACAAAACCTGAGATTAGTCAGTGGTACAACTGCATGTTTTGTCAGAAGATGTTCACTAAAAGAGAAACTTACGCAAGACATGTACAGAGAAAGCATAGAATTGCTGACGATAATATTAAGCAAGAAAATATTGGAGAAAACTTAGAAGGTGATCtcgaaagttataaaaatgagCAAACAGGTGAAATCACTTGCAAGGAATGTCCTCTAGTCTTTTCTTCAATTAATTTCCTAAAACTTCATATGCGAAGAAAACATAATGCTTTGAAAGAAGACTTCAGATTGAAATGTAGGATCTGTAATTTATCTTACGATAAGATCGAAAGTCTTAAACGCCATGTGAGACGGAAACACGATAAAGGCTCGCATTGCGAAGTGTGCAATAAACAATTTGATTCCagagaaatgtatttaaatcactCCCACACAAAAGTTATCAAAGAGTGCACAATTTGTGGACTCATATTTGCTTCTCAAGGTGGTTTAGCAAAGCACTTACGGTGTACACATAAAATAGACACACCAAAAACAGTCTTCTGTAACTTGTGCAATGAAGGGTTTCATGACAAACGGCAATTGAAACCGCATCTCATGAAAGTGCATTTAAAAGTTtcttatacatgtatgtactgcaaaaaagtttttaaagcaAAGGAAAGTTATCGGCGGCATATTCTGTTTAAGCATCCTGCTCCAAACTATGTTCACACGCAGCTGCAGAAATGTGAACACTGTACCGAGATGTTTAAAGATGAATTTGAACTTtgcaaacatataaatattgccCACAGACATACAGATGAGTGTATTACAGATGGCGTACACATAAAAAAGGAAGATGACGATATCAAGAACAATTTCCAGTGCACCAAGTGTCCTGAGATATATTTAACTTGGGACGAACTAAAACTACACTACGAACAATGTCACCACAATGTGGAACAAACTCAGTGTCAAATCTGTGGAGAAATACTGCAAGGAAATGAACTGGAAAAGCACATAAAAgcattacatacaaataatgagaagaaatgtaaatattgtgaatttaaaacaaatattaaaataagtttaacgCAGCATATGCTGAGACACAAAAATGCAGCTACGATATGTTGCGAGTACCCGGGTTGTCGGTATAAGACATTTTATGAAGGTGCTATGGACAAACATAGACGAAAGCACCTTGATCAAGGAGTCAAACTCCAATGTACGCAATGTCCCTTCCAAACTAtgaataagtatattttaaaatatcacgaAGAAGCACACGAAACCGGTAAGAAGAGGTATTCGTGTGACCAGTGTGATTATGCGACAATTCTTCCAGCAAATTTAGTGCAACACAAGTATAAACATTCTACAGAGAAACGGTTCAAATGCGACGTGTGCTCTTTTGCAACTAAGTACAATACGTCATTAAGATTTcatgtaagaaaaaaacactGTGATCTCCCGACATTCagctaa
- Protein Sequence
- MADNGIKVEVKVERKDPTSFLPEEPMSYEIKKKKKKKKKKDIEDPFKDIDDEMDMKPTITEIIPPAFDPEVNIKVEKIEVELDFHDFTDNTGLMLEGPDSEDSQEPAVKIENQNHEAVLLTFESVVNPKKILPSKEIGLPIDIVPKAEHFCKICHLVFQSTKTLRMHQKRKHKVFRKSFKHICDYCSMSYETKNSLVAHIKRKHGPDSLPDDKEERTCEICALVFKGMARLRMHMRRKHGSFQDSFKHVCKDCGLTYDKYRSLIVHIQRKHSNQTKPEISQWYNCMFCQKMFTKRETYARHVQRKHRIADDNIKQENIGENLEGDLESYKNEQTGEITCKECPLVFSSINFLKLHMRRKHNALKEDFRLKCRICNLSYDKIESLKRHVRRKHDKGSHCEVCNKQFDSREMYLNHSHTKVIKECTICGLIFASQGGLAKHLRCTHKIDTPKTVFCNLCNEGFHDKRQLKPHLMKVHLKVSYTCMYCKKVFKAKESYRRHILFKHPAPNYVHTQLQKCEHCTEMFKDEFELCKHINIAHRHTDECITDGVHIKKEDDDIKNNFQCTKCPEIYLTWDELKLHYEQCHHNVEQTQCQICGEILQGNELEKHIKALHTNNEKKCKYCEFKTNIKISLTQHMLRHKNAATICCEYPGCRYKTFYEGAMDKHRRKHLDQGVKLQCTQCPFQTMNKYILKYHEEAHETGKKRYSCDQCDYATILPANLVQHKYKHSTEKRFKCDVCSFATKYNTSLRFHVRKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00405296;
- 90% Identity
- iTF_00707232;
- 80% Identity
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