Pful015877.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- Zfy1
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000091.1:1299096-1302695[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.04 3.5 9.0 7.1 1 23 148 171 148 171 0.95 2 18 0.00038 0.033 15.3 1.5 1 23 180 203 180 203 0.96 3 18 0.013 1.2 10.5 0.4 2 23 216 238 216 238 0.97 4 18 0.00092 0.082 14.1 1.1 1 23 247 270 247 270 0.97 5 18 0.0093 0.82 10.9 5.7 1 23 282 305 282 305 0.96 6 18 0.00013 0.012 16.8 0.7 2 23 337 359 336 359 0.97 7 18 0.0013 0.11 13.6 1.2 2 23 369 391 368 391 0.96 8 18 0.078 6.9 8.0 1.6 2 19 397 414 396 417 0.91 9 18 0.0007 0.062 14.5 0.5 2 21 422 441 421 444 0.94 10 18 0.061 5.4 8.4 1.8 3 23 454 475 453 475 0.96 11 18 0.0048 0.43 11.8 2.5 1 23 480 503 480 503 0.93 12 18 0.00024 0.021 15.9 1.4 2 23 515 537 514 537 0.96 13 18 0.0036 0.32 12.2 0.6 1 23 561 584 561 584 0.94 14 18 1 91 4.5 0.5 2 23 591 612 590 612 0.91 15 18 0.017 1.5 10.1 2.5 2 23 618 639 617 639 0.98 16 18 1.8 1.6e+02 3.8 0.5 2 23 646 669 645 669 0.90 17 18 0.029 2.5 9.4 0.1 1 23 705 727 705 727 0.96 18 18 0.68 60 5.1 2.9 1 23 733 756 733 756 0.96
Sequence Information
- Coding Sequence
- ATGGCAGATAATGAAATAAAAGTAGATGTTAAACTTGAAAGAAAAGATCCTACCTCATTTTTACCTGAAGAGGCGATGACTTATGAAATTAAAAAGAAAAGAAAGAAAAAGAAAAAAGATATTGAGGATCCATTCAAGGATATTGAAGGTGAATCGGATAAGAAACCAGCAGTAACAGAAACAATACCGCCAGCTTTTGACCCTGAAGTTAATATTAAAGTTGAAAAAATTGAAGTTGAATTAGATTTCCATGATTTTATCGATAATGGAGGCCACATGCTAGAGGCGCCGGACAGCGAAGACAGCCAGGAGCCAGCTGTAAAAATTGAAAATCAAAACCATGAAGCCGTCTTACTTACTTTCGAGAGCGTCATTAATCCGAAAAAAATATTACCACCAAAGGAAGCAACATTTCCTATAGACATGGTACCTAAGCCAGAACACTTTTGCAAGATATGTCATCTGGTCTTTCAATCGACAAAAACACTAAGAATGCACCAGAAAAGAAAACACAAAATATTCAGAAAATCATTCAAACATATTTGTGATTACTGCAGCATGTCGTATGAAACGAAAAATAGTTTAGTTGCCCACATTAAACGTAAACATGGTCCAGATTCATTGCCGGATGATAAAGAAGAAAGAACGTGTGAAATATGTGCATTAGTGTTTAAAGGCATGGCCAGGTTAAGGATGCACATGAGACGGAAACATGGATCGTTCCAAGACTCCTTTAAGCATGAATGCGATGAGTGTGGTCTGACTTATGATAAATATAGAAGCCTATTAGTTCATATACAACGTAAACATTCAAACCAAACTAAGAAAGAGATTAGTCAATGGTACAACTGCATGTTTTGTCATAAGATGTTCACTAAAAGAGAAACTTACTCGAGACATGTACAAAGAAACCATAAAATTTCTGACGAAAACATAAAGCAAGAGAATATGGCAGACAACTTTGAAGGTGAACTCGAAAATTGTAAAAATGCGCAAACTGGTGAAATCACTTGCAAGGAATGCCCTTTAGTCTTTTCTTCGATTAATTTCCTAAAACTTCATATGCGAAGAAAACATAATGCGTTAAAAGAGGACTTCAGATTGAAATGTAGGATCTGCAATTTGTCTTATGATAAGATCGAAAGTCTTAAACGCCACGTGAGAAGGAAACACGATAAGGGATCACTACATTGCGATGTGTGCAACAAACAATTTGATTCCAGAGAAATGTTTTCGAATCACTCCCATATGAAAGTTATTAAAGAGTGCACAATTTGTGGACTCATCTTTGCCTCTCAAGGAGGTTTAGCGAAACATTTGAGGTGTACCCACAAAATAGATACACCAAAAACAGTCTTTTGTAACTTGTGCAACGAAGGGTTTCATGACAAACGGCAGTTGAAACCGCATCTCATGAAAGTGCATTTAAAAGTTTCATACACGTGTATATACTGCAAAAAAGTTTTTAAGGCGAAGGAGAGTTATCGGCGGCATATTCTGTTCAAACATCCTTCTCCGAACCATCTTAACACTCAGCTGCAGAAATGTGAGCAATGTACTGAGATGTTTAAGGATGAATTTGAACTTTGCAAACATATAAACATAGCCCACAGACATACGGGTGAGAGTATACCAGATGGCGTTCAAATAAAAAAAGAAGATGAAGATGTTAAGAATAACTTCCAGTGTACCAAGTGTCCTGAGACATATTTGACTTGGGATGAATTAAAACTACACTATGAACAATATCATTACAATATGGAACAAAATCAATGTCAGATTTGTGGAGAAATAATGCAAGGGCATGAACTGCAAAAGCATATAAAAGCACTACATACAAATAATGAGAAGCAATGTAAATATTGTAATTTTAAAACAAATATTAAAATAAGTTTAACGCAGCACATGCTGAGACACAAAAATGCAGCAACGATACGTTGCGAGTACCCAGGCTGTCGGTATAAGACGTTTTATGAAGGTGCTATGGAGAAGCATAAGCGAAAGCACCTTGATCAAGGAGTCAAACTCCAATGTACACAATGTCCTTTCCAAACTATGAATAAATATATTTTAAAATATCACGAAGAAGCACATGAAACTGGTAAGAAGAGGTATGCGTGTGACCAGTGTGATTATGCTACAATTCTGCCGGCAAATTTAGTGCAACATAAGTATAAACATTCTACAGAGAAACGGTTCAAATGTGATGTATGCTCTTTTGCCACTAAGTACAATACGTCCTTAAGGTTTCATGTTAAGAAAAAGCACTGTGATCTCCCGACACTCAGCTAA
- Protein Sequence
- MADNEIKVDVKLERKDPTSFLPEEAMTYEIKKKRKKKKKDIEDPFKDIEGESDKKPAVTETIPPAFDPEVNIKVEKIEVELDFHDFIDNGGHMLEAPDSEDSQEPAVKIENQNHEAVLLTFESVINPKKILPPKEATFPIDMVPKPEHFCKICHLVFQSTKTLRMHQKRKHKIFRKSFKHICDYCSMSYETKNSLVAHIKRKHGPDSLPDDKEERTCEICALVFKGMARLRMHMRRKHGSFQDSFKHECDECGLTYDKYRSLLVHIQRKHSNQTKKEISQWYNCMFCHKMFTKRETYSRHVQRNHKISDENIKQENMADNFEGELENCKNAQTGEITCKECPLVFSSINFLKLHMRRKHNALKEDFRLKCRICNLSYDKIESLKRHVRRKHDKGSLHCDVCNKQFDSREMFSNHSHMKVIKECTICGLIFASQGGLAKHLRCTHKIDTPKTVFCNLCNEGFHDKRQLKPHLMKVHLKVSYTCIYCKKVFKAKESYRRHILFKHPSPNHLNTQLQKCEQCTEMFKDEFELCKHINIAHRHTGESIPDGVQIKKEDEDVKNNFQCTKCPETYLTWDELKLHYEQYHYNMEQNQCQICGEIMQGHELQKHIKALHTNNEKQCKYCNFKTNIKISLTQHMLRHKNAATIRCEYPGCRYKTFYEGAMEKHKRKHLDQGVKLQCTQCPFQTMNKYILKYHEEAHETGKKRYACDQCDYATILPANLVQHKYKHSTEKRFKCDVCSFATKYNTSLRFHVKKKHCDLPTLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00405296;
- 90% Identity
- iTF_01360976;
- 80% Identity
- -