Cruf005814.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysomya rufifacies
Gene Symbol
lrrfip2
Assembly
GCA_014858695.1
Location
JACGTJ010001952.1:4456-9006[-]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.4e-118 9.6e-114 379.7 26.4 1 299 30 326 30 327 0.94
2 2 0.034 6e+02 -0.5 3.7 220 245 355 380 330 401 0.47

Sequence Information

Coding Sequence
ATGGATACTACAAGTGCCGTAGGACGGCGTCGTGTTAATTCGCGTGTTAATGCCGAAGATCAAGCTTTGGATCAAATAGCAAAAGAGGCTGAGGCTAGATTAGCTGCTAGAAGGCATGCCAGAGCAGAAGCTCGAGAAATACGCATGAGGGAGTTGGAACGTCAGCAGAAGGAACAAGAATCTAATGCAGATCGTGTCTTTGATATGCATTCAAATGTTACAGGCATAACACCACTGTCACATATGCGTTTAGGTTTAGGTAGTTCACCGGTAACGGGTTTACTTAATTCAACACGTGGAAATTCTATGTCATCAAGACGTAGTAGTGAAGATTCTCTGGAAGAAGAAGGTCGCAGTTTAAGGGATATACGTCATGAGTTAAAGGATGTAGAAGAACGATTTCGTAAGGCTATGATAGCAAACGCTCAGTTAGATAATGATCGTGCCTCACAAACCTATCAAATACAGTTGCTTAAAGATAAACTGGAAGATATGGAAGAATCATATTCACAATTACAGCGCGAATGCAAAGAGAAGACACGCGATTGTAATGCCTTAAAACGATCATTGGATAAATTAAGCGAAGAATTAAAACTGGTACAGGGTCAGCTAAATGAGCGTGACACACTGATAGCAGAACAGGGTTTAGTTATTGTGGCAATTGAAAATGAAGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTTCGACTTAAGAAATTTAGCGAAGAAAAACAACAATTACAAAACGAAGTCCAGCAATTGCAGGAACAATTAGATACGTATAAAAGTCAGGGTAAAGGACGAGGTAAAGGCAATTCATCAAATGGTCCTATAGGTTCAGATGATGATGATTATGAAGCTCAAAGAGAAGCTAATAAAATCATCTCGGATTATAAGTATAAATTACAAAAAGCTGAACAGGAAATTGCTAGTCTACAATCGAGTTTAGCCCGTTCGGAAACACAAGTTATACGTTATAAAAGTACCGCAGAAGCAGCTGAAAAAGCTGAGGCCGAATTGAAAATAGAAAGAAGGAAACTGCAAAGAGAGAATCGCGAGGCCATGGAAAAGCTTGAAGAGTTAGAAACCTCCAATAATCATTTGCTAAAACGTTTGGACAAATTAAAGAATGCCAAAAGTGCTTTGCTTAAAGATCTCTGA
Protein Sequence
MDTTSAVGRRRVNSRVNAEDQALDQIAKEAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSNVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQNEVQQLQEQLDTYKSQGKGRGKGNSSNGPIGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL