Pdom056104.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_947397865.1
- Location
- OX377620.1:9086183-9090470[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-115 3.5e-110 369.8 27.3 1 299 11 310 11 311 0.92 2 2 0.035 2.2e+03 -0.6 3.9 220 244 339 363 314 385 0.46
Sequence Information
- Coding Sequence
- ATGTTAGCGATGTCCCCTGCCAGTCACTCAGCTGAAGCAAGATTAGCCGCCCGGAGGCAGGCCAGAGCAGAAGCTCGTGAGATACGGATGCGAGAGTTGGAGCGGCAACAACAGCAACAAGAGCTAAATGCCGATCGAGTATTCGATATGCATACAACGGCGTCGGGCATAGATCCGCTTTCGCGAACACGGCTGGGAATGGGCAGTGCATCACCGGCAATTAGTGGCTTATTAAACTCTACACGAGGCGGTAACTCAATGTCTTCAAGACGCAGCAGCGAAGATTCTCTGGAAGAGGAAGGACGCAGCTTGAGAGATATACGTCATGAATTGAAGGATGTGGAGGAGCGATTTCGCAAGGCCATGATAGCTAATGCTCAGTTGGACAATGAGCGTGCCTCACAGACTTATCAAATACAATTGCTAAAAGATAAACTGGAAGATATGGAGGAATCTTATGCTCAGTTGCAGCGTGAGTTTAAAGAAAAGTCGCGCGATTGCAATGCTCTGAAGCGCTCGTTGGACAAACTGAGCGAAGAGTTGAAACTCGTACAAGGTCAACTAAATGAGCGAGACACACTTATTGCCGAACAAGGATTGGTTATTGTGGCCGTCGAAAACGAAGATGGTACAGATGCCAAGCGTGCTCTAGTCAGCGTAGAAAATTCACAATTATTAGGATCGGTTCAGGGTTCTCTAGATGTTCGACTTAAGAAATTCACCGAAGAGAAACAACAATTACAATCAGAAGTCCAACAGTTGCAAGAACAATTGGAGACATACAAAAGTCAAGGCAAAGGAAGAGGACGAGGAAATTCGTTGAATGGCCCTCTGGGTTCAGACGATGATGACTACGAAGCACAGAGAGAAGCCAATAAAATTATATCGGATTATAAGTATAAATTACAAAAAGCTGAACAAGAAATTGCTAGTCTACAGTCAAGTTTAGCTCGTTCCGAAACCCAAGTAATACGTTACAAAAGCACTGCCGAGGCCGCTGAAAAAGCAGAAGCTGAGCTTAAAATCGAAAGGAGAAAACTTCAAAGAGAGAATCGCGAGGCCATGGAAAAACTTGAGGAGCTAGAAACGTCGAACAATCATTTAATCAAACGCCTGGATAAGCTAAAGAATGCCAAGAGTGCTCTTCTGAAGGAACTTTGA
- Protein Sequence
- MLAMSPASHSAEARLAARRQARAEAREIRMRELERQQQQQELNADRVFDMHTTASGIDPLSRTRLGMGSASPAISGLLNSTRGGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEDMEESYAQLQREFKEKSRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAVENEDGTDAKRALVSVENSQLLGSVQGSLDVRLKKFTEEKQQLQSEVQQLQEQLETYKSQGKGRGRGNSLNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00331516;
- 90% Identity
- iTF_00331516;
- 80% Identity
- -