Gfus007963.1
Basic Information
- Insect
- Glossina fuscipes
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- Scaffold481:16608-26543[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-111 3.3e-107 358.4 26.7 1 299 29 321 29 322 0.92 2 2 0.039 7.8e+02 -0.7 4.0 219 245 349 375 324 396 0.47
Sequence Information
- Coding Sequence
- ATGGATACTTCAAATGTAGGACGGCGACGAGTTAATTCTCGTATAAATGCTGAAGATCAGGCGTTAGATCAAATTGCCAAAGAGGCGGAGGCCCGTTTGGCAGCACGAAGGCAGGCGAGAGCTGAGGCACGCGAAATACGTATGCGTGAGCTAGAGAGGCAACAAAAGGAACAAGAGCAGAATGCGGATCGTGTGTTTGATATGCATAATTCCTCGGGAATTGATACAATATCGCGTAATAGAATTAGTTTAGGATGTTCGCTCATCAGTGGTTTGCTTAACACAGCCCGTGGTAACTCAATGTCTTCTAGGCGCAGTAGCGAAGATTCATTAGAAGAAGAAGGGCGAAGCTTAAGAGATATACGTTACGAACTAAGGGGAGTGGAGGAGAGGTTTCGTAAAGCTATGGTAGCCAATGCTCAACTGGATAATGAACGTACCTCACACACATACCAAATTCAATTGTTGAAAGACAAATTGGAAGAAATGGAGGAATCATATGCTCAATTGCAACGTGAATTTAGGGAAAAATCCCGAGACTGCAACGTGCTAAAGCGCACTATAGATAAATTAAGCGAAGATCTAAAATTGGTGCAAGGTCAGTTATGTGAGCGAGACACTTTAATTGCGGAGCAAGGCTTGGTTGTAGTTGCTATTGAAAACGAAGACGGCACCGATGCCAGGAGAGCACTAGTCAGTGTTGAAAATGCAGAATTGTTAGGTTCTGTACAAGGTTCATTAGATGTTCGGCTaaaaaaaTTTAACGAAGAGAAGCAGCTGCTTCAGGCTGATTTGCAACTTCTCCAAGAAAAATTAGAGACGTTCAAAAGCTCGGGAAGAGGACGCGTTAATACAACTAATGGCCCATTTAGTTCTGAAGACGATTATGAAGCTCAAAGGGAGACTAATAAAATCATATCTGATTACAAGTATAAATTACAAAAGGCCGAACAAGAAATTGCTAACCTGCAAGCTAGCTTAGCTCGATCAGAAAGCCAAGTTATTCGCTATAAGAGCACCGCAGAAGCTGCTgaaaaagcagaggctgaattaaaaatagaaagaaggaaactgcaaagagagAATCGTGAAGCTATGGAAAAGTTGGAAGAATTGGAAACATCAAATAATCACTTATTGAAACGATTGGATAAATTAAAAAATGCGAAAAGCGCTCTCCTAAAAGATCTTTGA
- Protein Sequence
- MDTSNVGRRRVNSRINAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNSSGIDTISRNRISLGCSLISGLLNTARGNSMSSRRSSEDSLEEEGRSLRDIRYELRGVEERFRKAMVANAQLDNERTSHTYQIQLLKDKLEEMEESYAQLQREFREKSRDCNVLKRTIDKLSEDLKLVQGQLCERDTLIAEQGLVVVAIENEDGTDARRALVSVENAELLGSVQGSLDVRLKKFNEEKQLLQADLQLLQEKLETFKSSGRGRVNTTNGPFSSEDDYEAQRETNKIISDYKYKLQKAEQEIANLQASLARSESQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00331516;
- 90% Identity
- iTF_00749698;
- 80% Identity
- iTF_00750466;