Tsol019844.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947397855.1
- Location
- OX377612.1:73504766-73510574[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-117 1.9e-112 375.7 25.9 1 299 30 326 30 327 0.93 2 2 0.025 5.3e+02 -0.1 4.2 209 247 345 382 329 401 0.62
Sequence Information
- Coding Sequence
- ATGGATTCTATTAGTGCCGTAGGTCGGCGTAGAGGAAATTCGCGTGTTAATGCTGAGGATCAAGCTTTGGATCAAATAGCGAAAGAGGCTGAGGCTAGATTGGCAGCAAGAAGGCATGCCCGAGCGGAAGCTAGGGAAATACGGATGAGAGAATTGGAACGCCAGCAAAAGGAACAAGAATCAAATGCAGATCGAGTTTTCGATATGCATTCAACGGTAACTGGAATAACACCACTGTCACATATGCGGTTGGGCTTGGGAAATTCACCAGTAACTGGTTTACTAAACTCAACGAGAGGCAACTCCATGTCTTCCAGACGGAGCAGTGAAGATTCTCTTGAAGAGGAGGGCCGTAGTTTAAGGGATATACGTCATGAATTAAAAGATGTAGAAGAACGGTTTCGCAAAGCTATGATAGCGAATGCTCAGCTGGATAATGATCGTGCCTCACAAACTTATCAAATACAGTTGCTAAAGGACAAACTGGAAGATATGGAAGAGTCGTATTCACAATTGCAGCGTGAGTGTAAAGAAAAGACGCGCGATTGTAATGCCTTGAAACGATCGCTGGATAAATTAAGCGAAGAGCTTAAACTGGTACAGGGTCAGCTAAATGAACGTGATACACTGATAACAGAACAAGGCTTAGTTATTGTTTCAATTGAAAATGAAGATGGCACTGATGCCAAACGTGCTCTAGTCAGCGTTGAAAATGCACAGTTATTAGGTTCGGTACAAGGATCATTAGATGTTCGACTTAAAAAGTTCAACGAAGAAAAACATCAATTGCAGTCCGAAGTCCAACAGTTGCAGGATCAACTAGAGACGTATAAAAGTCAAGGCAAAGGGCGAGGTAAAGGCAATGCTTCAAATGGTCCTTTAGGTTCAGATGATGATGATTATGAAGCTCAAAGAGAAGCTAATAAAATCATATCGGATTATAAATATAAATTACAAAAAGCTGAACAGGAAATTGCTAGTCTACAGTCAAGCTTAGCACGTTCTGAAACACAAGTTATACGATATAAAAGTACAGCAGAAGCTGCTGAAAAAGCTGAAGCCGAACTTAAAATTGAAAGAAGGAAACTGCAAAGAGAGAATCGCGAGGCAATGGAAAAGATAGAAGAGTTAGAAACATCAAACAATCACCTACTTAAACGTTTGGACAAATTAAAGAATGCTAAAAGTGCTTTGCTAAAGGATCTCTGA
- Protein Sequence
- MDSISAVGRRRGNSRVNAEDQALDQIAKEAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGNSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLITEQGLVIVSIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFNEEKHQLQSEVQQLQDQLETYKSQGKGRGKGNASNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKIEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00331516;
- 90% Identity
- iTF_00331516;
- 80% Identity
- -