Cbil011568.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- -
- Assembly
- GCA_958496255.1
- Location
- OY292460.1:15169905-15180584[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.3e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 13 3.4 2.3e+02 3.2 0.0 1 23 1108 1130 1108 1130 0.94 3 13 1.1e-05 0.00076 20.5 0.7 2 23 1133 1154 1132 1154 0.96 4 13 0.0006 0.041 15.0 2.7 1 23 1160 1182 1160 1182 0.99 5 13 0.013 0.89 10.8 4.9 1 23 1188 1210 1188 1211 0.96 6 13 1.1 74 4.8 0.9 5 23 1224 1242 1222 1242 0.97 7 13 0.024 1.6 10.0 1.1 3 23 1249 1270 1248 1270 0.96 8 13 0.012 0.79 11.0 0.2 2 23 1287 1307 1286 1307 0.97 9 13 0.00012 0.0081 17.2 0.8 1 20 1313 1332 1313 1335 0.92 10 13 0.0091 0.62 11.3 2.1 1 23 1343 1365 1343 1365 0.99 11 13 0.0069 0.47 11.7 7.2 1 23 1371 1393 1371 1393 0.98 12 13 9.5e-06 0.00065 20.7 1.1 1 23 1399 1423 1399 1423 0.97 13 13 0.00062 0.042 15.0 5.5 1 23 1429 1451 1429 1452 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGCTCGTGCAGTGCCCCGTGTGCACGCTATTCCTGCACAATGGCATGTCGCTCGAGTCTCATCTCGACACGCATCCCAAGGACCAGGTCATCAAGGCTCTCTGCAGCATCACCAAAACTAATGCCAGCTGTGTCAGCAGCAGGACGCCTACTCCTGCCAACTCCGAGAGGTCCTACAGGAGCAGGTCTAGAACACCTATCACCGAGGACAGTGGGACTAATCCATGGACTGGATCGAAGGAACATGAGCGTTACTGGGCTAGGACACCCAGTGCCTCCAGCAGGACTCCCAGCGGGACTTCCAGCCGAGGGGTCAGCTGCACACCCAGCCGGACCCCCAGCAGAACTCCAAGTAGAACTCCCAGTAGAACTCCCAGTAGAACTGCTCGTTCTCACTCATCTGCAAACCTCTCGAGAAACTGCACTCCGGATATGAGATTGGTGGATAATTTGGCATTTGAAACTACAACAGTTAGTAGTTCATCACTAAACTCGCAATCTCGCCTTTCTAACTCACCGTCGGTTATTAAATTGGATAAATCTCACCGAACATACCAGCCGCCTCCGCCAGATTATGATCAGCAGTACATGGATTACCCTGATCAGCAGGAGGACCGCGAGATCAAGTATTCAAGAACTGCTGAGTACAATGCCCTCGATGTTAATGCAATGTATTCTTACAATGTGCCAATGCTCGGAACCAGTAGAATTCAAACAGTTCCTCCTCCTGTGGTGCCACGAAAAAGAACTGAACAGATCAAGACAAATAGTGGGATGAAGCCAACCAACCTACTCAACCTTgtgaaaaataatattggtgGAATGCAGTGTGTTCCTTATATGGCAAATCAGACCGCACCTTATCCAATGGTGCCAAGTGCGCCTACATTTGTTCAGAAAAATGTCCAAAACAGTATGGTACTGACCAGTGGTCTACCAAATGCCCGAGTTCAAATCGAGTCCAAAAGTGGAACTCCATTAGTCCAAAACCATTTCAACCTGCCTTCAGGTACTTTCACACCGGGAACTACTGTAGTTACTCAGAACTCTCAATACTTTTATCAGGAAATGGTGCAAAATATTGATCCTAAAGCATTTGTGCCTACAATGGCGCCTGTTTTTACAGGCCATGAGAATATCACTAATGTTGCTCAAACAAGCTCAGAATGCACAAGAATGTATCAGAATGTGATGCTTGTAGATCAGTTTGGTAATACTTCCTGTATGTATGCTCCTCAGTCGATGATTCCAAAAGCATCCGGTGCACCTCCACTGTTTACTGAGAGCATACCTCGGTCAGTAAATGCATTTGTGCAGAAACAAGGTCCAATTAAGAAGGACCCAGGCAAGACCCTTATCATAGAAGTGGGACCCATTCTGCCCCCACAGAGAGTGAGCTCCAGAGCCTCCACAAGTACTGTAGTACAGCAGCCTAGAGCTTCTGTCCCTAATGTTCCTATTATATCTACCCCTAAACCCGAGGCTCCCAGTATTTCTATAACTGAAAAGATTGACAGAAGTGAAGGTCCGTGCACAACTAGAGGCCTAAAGATACTTAGCAATATCAAGGTGGAAGTTCCAGTGCAGCACACCAAAAGCATGATCAACACTGTTATGGATCTGACAGGGTCTAACGACGCGGTGTATCCTGAACGGAGCAGGTCTCCCGAAAAGATCTTACCGGACTTCGAAGTTGGTAAAGAAAGGGTGTTGGAAGACTTTGCACAGCCCTCGACCGCTGGCGGCGATGGCTCCCACTCGTTTGAACTGAAGAAGTTTTCAAGCGCTACCTCAAACAAAGACTTGAATAGTAAAActagtgtagataataaagtAGAAAGCGACTTCGGCGATAGCTGTCCTGTCCCGGATCTGATATGTAACGAGAAGCCATCAATCTCTCCGTGCAGTGAGCTCTCGGAGAACGGAGACAACTCAGTGGATCGCTCACTGGTCTCCCCCAAGCCTCACTCCAGCGGCGTCATCGTCCGGAAGGAAGACTACGATTGCAAGAGAAAAGCGCCAATGAAAATAAGACTGAACAACATTTTCGTCAGAAAGAACAAAAAGATACTGCAGATAAAGAATGCTAAAACCGTGAACGAGATCACGCCCGTCGCTTGCTCCTCGAAAAGCGTAGCGCCCGAGAACTTCGCCGCCGTGAAGATAGCTCAGTCTCCGAAACGGAACGAGAAATCTACGCTCACGACGATATCTATCGAGGAGATCAGAGAGAAAGAGGAAGCATCTTTTGAGGAAATGGAGCCAGTGGAGGAGGTCAAAATGCCGCCGGCGCCTTCTAAATCGGAGAACGTCAACGTGAAGGAAGAGCTGAGTTGTAGCAACGAGTGTGCGTTCAGTAACGAAGCCCCGGGGCCCGCGCGGTTAGGGCCGATGGACCCGCTTCGACCTATCACAGTCAGCTACGGCAGCATGTCTCCTTCAGACTTCGACGACGAGTCCAGCAATCGCGAACTCTTAGACCTCGAAGGCGCGAAGAACAAGCAATTCGTGACGATGATGAACGATAACTACTTTGGGGATAACATTTACGCGGATTACTTCACTCCGGATCGAGTGGAAGCGTTCGACGACAAAGGGCCTACGGTTTTCAAAGACAATAACAAGGAGGCGTTCTCTTGCAACATTTGGGGAGAGCCTTCCACTAAAGAGAATGAATTTGTGCTCCCGAATTTCATCCACGAGAGTTACAAGATTGCTGACAACGGGGTGGAGTATGTGGACGGAGGGGAAGTGAGGGGAGAGAGCAAGTCAGATGTGTCGCCTTTGAATATATGCGCTGATGAGCGGATGCCGCCCCGCGGAGAGATTAGTGGACAGGAGAGCAACGGAGAGTCTTCTTGGAATGGGATGTACCCTGAAGTACCCCCAGCGGAGCCCTACGATTTAATGGCTCGCGAGAGCTGGGTGTCCGACGGATCCGAGCTCGATGTCACAGAGAAAAGAGACAATCTGGAAGAAGAGCTGGTGTTCCCAAAAGCGCGCCTGTACGCGTGTATAACATGCGGCACTAAGCACAACTCACTGAAAGAGTTGCGCGCTCACAAAGCGGCCGAGCACGCCACGCCCACTTGCTCCAAGACCACGTACAGCCGGCTCCTCACTGCTAGAGCTATCAAGAAAGAGAAGGCAGAAGACTTGACGTGCGCAGCCAATCTTCTATCCATGGACACAAAGGAGACCATAACATCGACAATCCTCCAAGTATTCGACCCGGACGCGATAGAAGCCAAGCCCAAATTAGGCAACCTGCGCACGCTGCTCAAGAAGGAAGGGAAACGAAAACGAAGGGACTTCGTCTGCCCCACTTGTAAGGTGGATCAGgTGACCGAGCCGGCTTTCACAGCGCATCTTAAAATCCACCCGCTCGAGTGCCTGACCTGCGGTAAATTCTTCTCGCGCCGCGCCAACCTACAGCTGCACGCGAAAACTCATCTCGGCATCAAGGACTATAAATGCGACGTGTGCGAGAAGCGGTTCGTGACGCGACAGAAGCTAGGTGAACATCACAACACCCACACCGGCCGCGCGCCTTACAAGTGCACTTTCTGCGACGACACCTTCCGACGTTACTCCAATATGGTGCAGCATCGCGACCGTCACCACCTGCACAAGCGTGCGAAAAGCCGCGACTTCGTGTGCCACTGCGGCGCGGTCTTCCAATCCCGCGCCAAGTTCCTCTGGCACAAGGAGACTCACGCCGACAAGCCGCGCGCCTGCCTCTACTGCAGCGACAAGTTCGTGCACGCAGCCTCTCTCACGAGACACGTGCGAAGATCGCACAACCATCTGTATTTATCGCAGACGAGCCGCGGGAAGAACGATAACGTCACCTGCCCTGTATGCAAACAGGTATACCTCCGCACAAACTTGCGCGCGCATCTCCTGACTCACAGCGGCAAGCGTCCCTACTCGTGCGTCGTCTGCAACAAGGCTTTCACAACCAAATGGAACCTCAAACTCCACCGTTGGACCCACATGAGCCGCTCCGCTAAACCCTTCAAATGCTCCCTCTGCAAGGGCGCCTTCATCCGTCACACAGAGTACGTATCGCACATGAACTCGCACAAATCTGTGCGACCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCAGGAAATACAACTGCCAGAGACACGTCAGGGAACACGAGATGGCCAAGAAATTCGTGTGCAACGTTCCGGAGTGCGGCAAATCGTTCCACAGAAGTTACTACCTTTCAGAACATATGAAGGTGCATAGCGGAGTCAGGCCGTTCTCTTGCGATATATGCGATAAGACATCGAGCAACAAGTCCAATCATAATAAGCATATGAAGATCCACCACGCTAGGGAGATGGTCGCGTCGGAGGCCTAG
- Protein Sequence
- MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSITKTNASCVSSRTPTPANSERSYRSRSRTPITEDSGTNPWTGSKEHERYWARTPSASSRTPSGTSSRGVSCTPSRTPSRTPSRTPSRTPSRTARSHSSANLSRNCTPDMRLVDNLAFETTTVSSSSLNSQSRLSNSPSVIKLDKSHRTYQPPPPDYDQQYMDYPDQQEDREIKYSRTAEYNALDVNAMYSYNVPMLGTSRIQTVPPPVVPRKRTEQIKTNSGMKPTNLLNLVKNNIGGMQCVPYMANQTAPYPMVPSAPTFVQKNVQNSMVLTSGLPNARVQIESKSGTPLVQNHFNLPSGTFTPGTTVVTQNSQYFYQEMVQNIDPKAFVPTMAPVFTGHENITNVAQTSSECTRMYQNVMLVDQFGNTSCMYAPQSMIPKASGAPPLFTESIPRSVNAFVQKQGPIKKDPGKTLIIEVGPILPPQRVSSRASTSTVVQQPRASVPNVPIISTPKPEAPSISITEKIDRSEGPCTTRGLKILSNIKVEVPVQHTKSMINTVMDLTGSNDAVYPERSRSPEKILPDFEVGKERVLEDFAQPSTAGGDGSHSFELKKFSSATSNKDLNSKTSVDNKVESDFGDSCPVPDLICNEKPSISPCSELSENGDNSVDRSLVSPKPHSSGVIVRKEDYDCKRKAPMKIRLNNIFVRKNKKILQIKNAKTVNEITPVACSSKSVAPENFAAVKIAQSPKRNEKSTLTTISIEEIREKEEASFEEMEPVEEVKMPPAPSKSENVNVKEELSCSNECAFSNEAPGPARLGPMDPLRPITVSYGSMSPSDFDDESSNRELLDLEGAKNKQFVTMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNNKEAFSCNIWGEPSTKENEFVLPNFIHESYKIADNGVEYVDGGEVRGESKSDVSPLNICADERMPPRGEISGQESNGESSWNGMYPEVPPAEPYDLMARESWVSDGSELDVTEKRDNLEEELVFPKARLYACITCGTKHNSLKELRAHKAAEHATPTCSKTTYSRLLTARAIKKEKAEDLTCAANLLSMDTKETITSTILQVFDPDAIEAKPKLGNLRTLLKKEGKRKRRDFVCPTCKVDQVTEPAFTAHLKIHPLECLTCGKFFSRRANLQLHAKTHLGIKDYKCDVCEKRFVTRQKLGEHHNTHTGRAPYKCTFCDDTFRRYSNMVQHRDRHHLHKRAKSRDFVCHCGAVFQSRAKFLWHKETHADKPRACLYCSDKFVHAASLTRHVRRSHNHLYLSQTSRGKNDNVTCPVCKQVYLRTNLRAHLLTHSGKRPYSCVVCNKAFTTKWNLKLHRWTHMSRSAKPFKCSLCKGAFIRHTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGVRPFSCDICDKTSSNKSNHNKHMKIHHAREMVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661662; iTF_00377412; iTF_00638917; iTF_01529479; iTF_01528626; iTF_00361928; iTF_00662539; iTF_00737739; iTF_00633034; iTF_00686620; iTF_00856975; iTF_01183247; iTF_00119955; iTF_00811336; iTF_01336233; iTF_01429309; iTF_01220056; iTF_00663424;
- 90% Identity
- iTF_01528626;
- 80% Identity
- -