Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: -
Assembly: GCA_947086425.1
Location: OX352203.1:9532822-9542761[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.7 99 3.9 0.3 2 23 6 27 5 27 0.96

2 14 3.2 1.8e+02 3.1 0.0 1 23 1107 1129 1107 1129 0.94

3 14 6.7e-06 0.00038 20.9 1.3 2 23 1132 1153 1131 1153 0.97

4 14 0.00021 0.012 16.2 2.3 1 23 1159 1181 1159 1181 0.99

5 14 0.00034 0.019 15.6 3.8 1 23 1187 1209 1187 1210 0.96

6 14 5.8 3.3e+02 2.3 1.1 5 23 1223 1241 1222 1241 0.95

7 14 0.022 1.2 9.9 1.1 3 23 1248 1269 1247 1269 0.96

8 14 1.9 1.1e+02 3.8 1.2 10 23 1342 1356 1341 1356 0.93

9 14 0.0025 0.14 12.9 0.2 2 23 1373 1393 1372 1393 0.97

10 14 0.00011 0.0063 17.1 0.8 1 20 1399 1418 1399 1421 0.92

11 14 0.0046 0.26 12.0 2.2 1 23 1429 1451 1429 1451 0.99

12 14 0.0064 0.36 11.6 7.2 1 23 1457 1479 1457 1479 0.98

13 14 1.1e-05 0.00061 20.3 0.9 1 23 1485 1509 1485 1509 0.97

14 14 0.00057 0.033 14.9 5.5 1 23 1515 1537 1515 1538 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.7	99	3.9	0.3	2	23	6	27	5	27	0.96
2	14	3.2	1.8e+02	3.1	0.0	1	23	1107	1129	1107	1129	0.94
3	14	6.7e-06	0.00038	20.9	1.3	2	23	1132	1153	1131	1153	0.97
4	14	0.00021	0.012	16.2	2.3	1	23	1159	1181	1159	1181	0.99
5	14	0.00034	0.019	15.6	3.8	1	23	1187	1209	1187	1210	0.96
6	14	5.8	3.3e+02	2.3	1.1	5	23	1223	1241	1222	1241	0.95
7	14	0.022	1.2	9.9	1.1	3	23	1248	1269	1247	1269	0.96
8	14	1.9	1.1e+02	3.8	1.2	10	23	1342	1356	1341	1356	0.93
9	14	0.0025	0.14	12.9	0.2	2	23	1373	1393	1372	1393	0.97
10	14	0.00011	0.0063	17.1	0.8	1	20	1399	1418	1399	1421	0.92
11	14	0.0046	0.26	12.0	2.2	1	23	1429	1451	1429	1451	0.99
12	14	0.0064	0.36	11.6	7.2	1	23	1457	1479	1457	1479	0.98
13	14	1.1e-05	0.00061	20.3	0.9	1	23	1485	1509	1485	1509	0.97
14	14	0.00057	0.033	14.9	5.5	1	23	1515	1537	1515	1538	0.96

Sequence Information

Coding Sequence: ATGGACCAGCTAGTGCAGTGCCCCGTGTGCACGCTATTCCTGCACAATGGCATGTCGCTCGAGTCTCACCTTGACACGCATCCCAAGGACCAGGTCATCAAGGCTCTGTGTAGTATCACCAAAACCAACGCCAGGTGCGTCAGCAGCAGGACGCCCACTCCTGCCAACTCCGAGAGGTCCTACAGGAGCAGGTCCAGAACGCCCATCACTGAGGACAGTGGCACTAATCCATGGAATGGATCTAAGGAACATGAACGCTACTGGGCTAGAACCCCCAGCGTGTCCAGTCGGACCCCTAGCGGGACCTCCAGCCGAGGGGTCAGCCGGACCCCCAGCCGCACCCCCAGCAGAACACCAAGCAGGACTCCCAGTAGAACTCCTCGTTCACAATCATCCGCCAACTTCTCAAGAAACTGCACTCCGGATATCAGACTGGTTGATAATTTGGCATTTGAAACTACAACAGTTAGCAGTTCGTCACATAACTCGCAATCTCGCCTTTCTAACTCACCCTCGGTTATAAAATTGGATAAATCTCACCGATCATACCAGCCCCCTCCTCCGGAGTATGATCAGCAGTACATGGACTACTCCGACCAGCAGGAGGACCGGGAGATCAAGTATTCAAGATCTGCTGAGTACAATGCCCTTGATGTTAATGCGATGTATTCTTACAATGTGCCGATGCTCGCAACCAATAAAATTCAAACTGCACCACCTCCTCCCCCTCCTGTGATTCAGCGAAAAAGAAATGAACCAATCAAGACAAATAGTGGAATGAAGCCAACCAACCTACTCAACCTTGTAAAAAATAATATTGGTGGAATGCAGTGTGTGCCTTATATGGCAAATCGCGCTGCATCTTATCCAATTTTGCCAAGTGCTCCTACATTTGTTCAGAAGAATGTCCAAAATAGTATGGTAATGACCAGTGGACTACCCAACACCCAAGTTCAAATTGAATCTAAGAGTGGAGCACCATTAGTCCAAAACCATTTCAACCTGCCTTCAGGTACTTTCACACCGGGAACTACTGTGGTTACTCAGAACTCTCAGTACTTTTATCAGGAAATGGTGCAAAATATTGATCCAAAATCATTTGTGCCTACAATGCCGCCTGTTTTTACAGGACATGAGAATATCACTAATGTTGCTCAAACAAGCTCTGAATGCACAAGGATGTATCAGAATGTGATGCTCGTAGATCAGTTTGGAAATACTTCTTGTATGTATGCTCCTCAGTCAATGATTCCCAAAGCATCAGCGGCACCGCCTTTGTTCACTGAGAGTAGTACTCGGACAGTAAATGCATTTGTGCAGAAGCAGGGTCCAATTAAGAAGGACACGAACAAGACCCTAATCATAGAAGTGGGACCTATTCTGCCCCCACAGAGAGTGAGCTCCAGAGCCTCAACAAGCACTGTTGTACAACAGCCGAGAGCTTCCGTCCCCAATGTTCCTATTATATCCCCACCTAAACCAGAGGCTCCCAGTATTTCGATTACTGAAAAAATTGACAGAAATGAAGTTCCATGTACAACTAGAGGCCTAAAGATACTGAGCAATATCAAGGTGGAAGTGCCAGTGCAGCACATTAAAAGCATGATCAACACTGTCATGGATCTGACAGGCTCTAACGATGCAGTGTATCCTGAACGGAGCAGGTCTCCAGAAAAGATCTTGCCGGACTTGGATGTCAGTAAAGAAAGGGTAATGGAAGACTTTGCGCAGCCCTCGACCGCTGGCGGCGACGGCTCACACTCGTTCGAACTGAAGAAGTTCGCAAGTACTACCTCAATCAAAGACTTGAATAGTAAAACTAATGTAGATAATAAAGTAGAAAGTGACTTCGGCGATAGCTGTCCTGTCCCGGACCTGATATGTAATGAGAAACCATCGATCTCTCCGTGCAGTGAGCTCTCGGAGAACGGAGACAACTCGGTGGATCGGCCGCTGGTCTCCCCAAAGCCCCACTCCAGTGGCGTCATCGTCCGGAAGGAAGACTACGAATGCAAAAGAAAAGCGCCAATGAAAATAAGACTGAACAACATTTTCGTGAGAAAGAACAAAAAGATACTCCAAATAAAGAATGCTAAGACCGTTAATCGCGAAATTTCGCCAATCGCTTGCTCCTCGACGAGTGTAGCGCCCGAAAACTTCGCCGCGGCGATGATAGCGCAGTCTCCGAAACGGAACGAGAAATCAACGCTCACGACGATATCTATCGAGGAGATCAGAGAGAAAGAGGAAGCTTCTTTTGAGGATATGGAGCCGGTGGAAGAGGTTAAAATGCCGCCGGCGCCGTCTAAATCGGAGAACGTGCCTGTTAAGGAGGAGCTGAGTTGCAGCAACGAGTGTGCGTTCAGCAACGAAGCCCCGGGGCCGGCGCGGATTGGGCCAATGGACCCGCTTCGACCTATCACAGTCAGCTATGGCAGCATGTCTCCCTCGGATTTCGACGACGAATCCAGCAACCGTGAGCTCTTAGACCTCGAAGGAGCCAAGAACAAGCAGTTCGTTACAATGATGAACGACAACTACTTTGGGGATAATATTTACGCGGATTATTTCACGCCGGACCGCGTGGAAGCGTTCGACGATAAAGGGCCTACGGTTTTTAAAGACAATAACAAGGAGGCGTTCTCTTGCAATATATGGGGGGAGCCGTCGACTAAGGAAAATGAGTTTGTTCTCCCGAATTTTATTCATGAGAGTTACAAGATTGCTGAGAACGGGGTGGAGTATGCGGAAGGGGAGGCGAGGCCGGAAAGTAAGGCAGACGTGCCTCCTCTCAATATATGCGCTGATGAACGGATGCCGCCCCGCGGGGAAATCAGTGGGCAGGAGAGCAACGGAGACTCCTCTTGGAATGGGATGTACCCCGAGGTGCCGCCATCGGAGCCCTACGACCTGATGGCGCGCGAGAGCTGGGTCTCGGACGGCTCGGAGCTCGATGTCACTGAGAAAAGAGACAATCTGGAGGAAGAGATGGTGTTCCCCAAAGCGCGCCTATACGCGTGCATAACTTGCGGCACAAAGCACAACTCACTGAAGGAGTTGCGCGCTCACAAAGCGACCGAGCACGCCACGCCCACGTGCTCAAAGACAACGTATAGTAGACTGATCACTGCCAGAGCTATCAAGAAAGAGAAGGCAGAGGATTTGACTTGCTCAGCCAACCTTCTAGCCATAGACACAAAGGAGACCATAAAGTCTTCAATCCTGCAAGTTTACGACCCAGACACGATAGAGGCGAAGCCAAAGCTTGGTAATCTGCGAACGCTGCTTAAGAAGGAGGTTAAAAGGAAACGAAGGGATTTCGTCTGTCCCACTTGTAAGGTGGACCAGGTGACAGAGCCAGCCTTCACAGCGCATCTTAAGATCCATCCGTTGGAGTGCTTAACCTGCGGTAAATTCTTCTCACGCCGCGCCAATCTACAGCTGCATACGAAGACGCATCTCGGCATCAAGGACTACAAATGCGACGTGTGTCCGAAGCGGTTCGTGACTCGTCAGAAGCTCGGTGAACATCACAACACGCACACCGGCCGCGCGCCGTACAAGTGCACATTCTGTGATGAAGCCTTCAGACGGTACTCCAACATGGTGCAACATCGCGACCGCCACCATCTCCACAAGCGAGCTAAGAGCCGCGACTTCGTCTGCCAGTGCGGCGCCGTGTTCCATTCCCGCGCCAAGTTCCTCTGGCACAGCGAGACTCACGCAGACAAGCCGCGAGCCTGTCTCTACTGCAGCGACAAGTTTGTGCACGCGGCTTCGCTCACGAGACACGTGCGACGCTCGCACAACCATCTCTATCTCTCGCAGCAGAACAGACAGAAGAACGATAACGTCACTTGTCCGATATGCAAGCAGGTATGTATCTCTACTGTAGCGACAAGTTTGTGCACGCGGCTTCGCTCACACGACACGTGCGACGCTCGCACAACCATCTCTATCTCTCGCAGCAGAACAGACAGAAGAACGATAACGTCACTTGTCCGATATGCAAGCAGCGACAAGTTTGTGCACGCGGCTTCTCTCACACGACACGTGCGACGCTCGCACAACCATCTCTATCTCTCGCAGCAGAACAGACAGAAGAACGATAACGTCACTTGTCCGATATGCAAGCAGGCGTACCTGCGGTCGAACCTGCGCGCGCACCTACTAACTCACAGCGGCAAGCGTCCCTACTCGTGCGTGGTGTGCAACAAGGCATTCACCACCAAGTGGAACCTCAAACTCCATCGCTGGACGCACATGAGCCGCTCCGCCAAACCCTTCAAATGCACCCTTTGCAAGGGCGCCTTCATCCGCCACACGGAGTATATTTCCCACATGAATTCGCACAAGTCTGTTCGCCCCTACACCTGTAATTACTGCGGCTGTCAGTTCATAAGGAAGTACAATTGTCAGCGGCACGTCCGCGAGCACGAGATGGCTAAAAAGTTCGTCTGCGACGTGCCAGAGTGTGGCAAGTCCTTCCACAGAAGCTACTATCTCTCTGAGCATATGAAGGTCCACAGCGGAGTCAGGCCATTCTCCTGCGATATATGCGATAAGACGTCGAGCAATAAGTCCAATCACAACAAGCATATGAAGATACATCACGCGAGGGAGATGGTCGCGTCGGAGGCCTAG
Protein Sequence: MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSITKTNARCVSSRTPTPANSERSYRSRSRTPITEDSGTNPWNGSKEHERYWARTPSVSSRTPSGTSSRGVSRTPSRTPSRTPSRTPSRTPRSQSSANFSRNCTPDIRLVDNLAFETTTVSSSSHNSQSRLSNSPSVIKLDKSHRSYQPPPPEYDQQYMDYSDQQEDREIKYSRSAEYNALDVNAMYSYNVPMLATNKIQTAPPPPPPVIQRKRNEPIKTNSGMKPTNLLNLVKNNIGGMQCVPYMANRAASYPILPSAPTFVQKNVQNSMVMTSGLPNTQVQIESKSGAPLVQNHFNLPSGTFTPGTTVVTQNSQYFYQEMVQNIDPKSFVPTMPPVFTGHENITNVAQTSSECTRMYQNVMLVDQFGNTSCMYAPQSMIPKASAAPPLFTESSTRTVNAFVQKQGPIKKDTNKTLIIEVGPILPPQRVSSRASTSTVVQQPRASVPNVPIISPPKPEAPSISITEKIDRNEVPCTTRGLKILSNIKVEVPVQHIKSMINTVMDLTGSNDAVYPERSRSPEKILPDLDVSKERVMEDFAQPSTAGGDGSHSFELKKFASTTSIKDLNSKTNVDNKVESDFGDSCPVPDLICNEKPSISPCSELSENGDNSVDRPLVSPKPHSSGVIVRKEDYECKRKAPMKIRLNNIFVRKNKKILQIKNAKTVNREISPIACSSTSVAPENFAAAMIAQSPKRNEKSTLTTISIEEIREKEEASFEDMEPVEEVKMPPAPSKSENVPVKEELSCSNECAFSNEAPGPARIGPMDPLRPITVSYGSMSPSDFDDESSNRELLDLEGAKNKQFVTMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNNKEAFSCNIWGEPSTKENEFVLPNFIHESYKIAENGVEYAEGEARPESKADVPPLNICADERMPPRGEISGQESNGDSSWNGMYPEVPPSEPYDLMARESWVSDGSELDVTEKRDNLEEEMVFPKARLYACITCGTKHNSLKELRAHKATEHATPTCSKTTYSRLITARAIKKEKAEDLTCSANLLAIDTKETIKSSILQVYDPDTIEAKPKLGNLRTLLKKEVKRKRRDFVCPTCKVDQVTEPAFTAHLKIHPLECLTCGKFFSRRANLQLHTKTHLGIKDYKCDVCPKRFVTRQKLGEHHNTHTGRAPYKCTFCDEAFRRYSNMVQHRDRHHLHKRAKSRDFVCQCGAVFHSRAKFLWHSETHADKPRACLYCSDKFVHAASLTRHVRRSHNHLYLSQQNRQKNDNVTCPICKQVCISTVATSLCTRLRSHDTCDARTTISISRSRTDRRTITSLVRYASSDKFVHAASLTRHVRRSHNHLYLSQQNRQKNDNVTCPICKQAYLRSNLRAHLLTHSGKRPYSCVVCNKAFTTKWNLKLHRWTHMSRSAKPFKCTLCKGAFIRHTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCDVPECGKSFHRSYYLSEHMKVHSGVRPFSCDICDKTSSNKSNHNKHMKIHHAREMVASEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267528;
90% Identity: -
80% Identity: -