Ealt010500.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- zfy1
- Assembly
- GCA_963565295.1
- Location
- OY751386.1:1511795-1521795[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.8 1.2e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 13 3.2 2.2e+02 3.2 0.0 1 23 1100 1122 1100 1122 0.94 3 13 7.8e-06 0.00053 20.9 0.8 2 23 1125 1146 1124 1146 0.97 4 13 0.00057 0.038 15.0 2.7 1 23 1152 1174 1152 1174 0.99 5 13 0.012 0.83 10.8 4.9 1 23 1180 1202 1180 1203 0.96 6 13 3.1 2.1e+02 3.2 0.2 6 23 1217 1234 1215 1234 0.98 7 13 0.022 1.5 10.0 1.1 3 23 1241 1262 1240 1262 0.96 8 13 0.18 12 7.2 0.3 2 23 1278 1298 1277 1298 0.96 9 13 0.00011 0.0076 17.2 0.8 1 20 1304 1323 1304 1326 0.92 10 13 0.0087 0.58 11.3 2.1 1 23 1334 1356 1334 1356 0.99 11 13 0.0065 0.44 11.7 7.2 1 23 1362 1384 1362 1384 0.98 12 13 9e-06 0.0006 20.7 1.1 1 23 1390 1414 1390 1414 0.97 13 13 0.00059 0.04 15.0 5.5 1 23 1420 1442 1420 1443 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGCTCGTGCAGTGCCCCGTGTGCACGCTATTCCTGCATAATGGCATGTCGCTCGAGTCGCACCTCGACACGCATCCCAAGGACCAAGTCATCAAGGCTCTCTGTAGCATCACCAAAACTAATACCAGCTGTGTCAGCAGCAGGACGCCTACTCCTGCTAATTCCGAGAGGTCATACAGGAGTGGCTCTAGAACACCTATTACTGAGGACAGTGGGACTAATCCATGGAATGGATCGAAGGAACATGAGCGCTACTGGGCTCGAACGCCTAGTGCCTCCAGCAGGACCCCTAGTGGAACATCCAGCAGAGGAGTCAGCCGCACACCCAGTCGGACTCCCAGCAGGACTCCTAGTAGAACTGCTCGCTCTCATTCATCCACAAACCTCTCAAGAAACTGCACTCCTGATATGAGATTGGTTGATAATTTAGCTTTTGAAACTACAACAGTTAGTAGTTCATCACAAAACTCGCAATCTCGTCTTTCTAATTCACCTTCAGTTATAAAATTGGATAAAACTCACCGACCATACCAACCACCTCCGCCACCAGAGTATGATCAGCAGTATATGGATTACTCGGATCAGCAGGAGGATCGGGAAGTAAAGTATTCTAGAAGTGCAGAGTACAATGCCCTTGATGTTAATGCTATGTATTCATACAATGTGCCAATGCTTGGGACAACTAAAATTCAGTCAGTTCCTCCTCCTGTGCCACGGAAGAGAAATGAACAGACCAAGATAAACAGTGTTATGAAGCCAACCAACCTACTCAAccttgtaaaaaataatattggtGGAATGCAGTGTTTGCCCTATATGGCAAACCGCACTGCCACTTATCCAATGGTGCAGAGCACCCCTACTTTTGTCCAGAAGAATGTCCAAAATAGTATGGTAATGACCAGCGGGCTGCCCAACACCCAAGTTCAAATTGAATCTAAGAGTGGAGCTCCATTAGTCCAAAACCATTTCAACCTGCCTTCAGGTACTTTCACACCAGGAACTACTGTGGTTACCCAGAACTCTCAGTACTTTTACCAGGAGATGGTACAAAATATTGATCCTAAATCATTTGTGCCTACAATGCCACCTGTTTTCACGGGCCATGAGAATATCACTAATGTTGCTCAAACTAGCTCGGAATGCACAAGAATGTATCAAAACGTGATGCTGGTAGATCAGTTTGGAAATACTTCCTGTATGTATGCTCCTCAGTCAATGATCCCCAAAGTAACCGGTGCAGCTCCACTGTTCACCGAGAGTAGCACTCGCTCTGTGAATGCAGTTGTGCAGAAACAGGGTCTAATAAAGAAAGACCTGAACAAGACCCTTATCATTGAAGTGGGACCCATTCTGCCCCCACAGAGAGTGAGTTCCAGAGCCTCCACAAGCACTGTGGTACAACAGCCTAGAACTGCCATCCCCAATGTTCCTATTATATCTCCCCCTAAACCTGAGGCTCCCAGTATTTCAATAactgaaaaaattgaaaaaaatgatATTCCATGCACAACTAGAGGCCTAAAGATACTGAGCAATATCAAGGTGGAAGTTCCAGTGCAGCACATTAAAAGCATGATCAACACTGTTATGGATCTGACAGGATCTAACGACGCGGTGTATCCTGAAAGGAGCAGGTCTCCTGAAAAGATCTTGCCAGATTTGGACGTTAGTAAAGAAAGGGTGATGAAAGACTTCGCACAGCCCTCGAACGCTGGCGGCGATGGCTCCCACTCGTTTGAACTGAAGAAGTTTACAAGTGCTACCTCAAACAAAGACTTGAATAGTAAAACTAGTGtagataataaaatagaaaGCGACTTCGGCGACAGCTGTCCTGTCCCGGATCTGATATGTAATGAGAAGCCATCAATCTCTCCATGCAGCGAGCTCTCAGAGAGCGGGGACAACTCGGTAGACCGCCCGATGGTCTCCCCCAAGCCTCACTCCAGCAGCGTCATCGTTCGGAAGGAAGACTACGATTGCAGGAGAAAAGCGCCAATGAAGATAAGACTGAACAACATTTTCGTCAGAAAGAATAAAAAGATCCTGCAAATAAAGAATGTTAAAACCGTGAACTCAACCCATGAGATCACCCCCGTCGCTTGCTCCTCGAAAAGCGTAGCGCCCGAGAACTTTGCCGCTGCGAAGATAGCTCAGTCTCCAAATCGTAACGAAAAATCGACTCTCACGACGATATCCATCGAGGAGATCAGAGAAAAAGAGGAAGCTTCTTTTGAGGATATGGAGCCAGTGGAGGAGGTTAAAATGCCTTCTAAATCTGAAAACATCAATGTGAAGGAAGAGTTGAGCTGTAGCAACGAGTGTGCGTTTAGTAACGACGCCCCGGGGCCTGCGCGGATGGGTCCGTTGGACCCGCTTCGACCTATCACAGTCAGCTACGGCAGCATGTCTCCTTCGGACTTCGACGACGAATCCAGTAATCGTGAACTCTTAGACCTCGAAGGCGCGAAGAACAAGCAGTTCGTGACGATGATGAACGACAACTATTTCGGGGATAACATTTACGCGGATTACTTTACCCCGGATCGCGTCGAGGCGTTCGACGATAAAGGACCTACGGTTTTCAAGGATAATAACAAGGAGGCGTTTTCTTGCAATATTTGGGGGGAGCCTTCGACTAAGGAGAATGAATTTGTTCTCCCGAATTTCATTCACGAGAGTTACAAGATCGCTGATAGCGGGGTGGAGTACGCGGATGGAGGGGAAATGCGGGGGGAGAGCAAGGCAGATGTGCCGCCTTTGAATATATGCGCGGATGAGCGGATGCCGCCCCGCGGGGAGATTAGTGGACAAGAAAGCAACGGAGAGTCTTCTTGGAACGGGATGTACCCCGAGGTGGCCCCAGTGGAGCACTACGACCTGATGGCCCGAGAGAGCTGGGTCTCGGACGGATCCGAGCTCGATGTCACCGAGAAAAGAGACAATCTGGAAGAAGAGCTAGTTTTCCCTAAAGCGCGTCTGTACGCGTGCATAACATGTGGCACTAAGCACAATTCTCTGAAGGAGTTGCGCGCTCACAAAGCGGCCGAGCACGCCACGGCCACGTGCTCGAAGACCACGTACAGCCGGCTCCTCACTGCTAGAGCCATCAAGAAGGAGAAAGCAGAAGACTTGACGTGTGCAGCCAACCTACTATCGATTGACACAAAGGGGACAATAACATCGACTATCCTGAAAGTATACGATCCGGATACTCTAGAAGCAAAGCCCAAACTCGGGAATCTACGTACACTGCTAAAAAAAGAGGGGAAACGAAAACGCCGAGACTTCGTCTGCCCCACTTGCAAAGTGGACCAGGTCACGGAGCCGGCCTTCACGGCCCACCTTAAGATCCATCCGCTGGAGTGTTTTACATGCGGCAAGCTGTTCTCCAGGCGCGCAAACTTACAGCTGCATATCAAGACTCATCTCGGCATCAAGGATTACAAATGCGACGTGTGCGAGAAGCGGTTTGTGACGCGACAGAAACTCGGCGAACATCACAACACTCACACCGGCCGCGCGCCTTACAAGTGCACCTTCTGCGACGATACCTTCCGCCGGTACTCCAATATGGTGCAGCATCGAGACCGCCACCACCTCCACAAGCGAGTGAAaacccgcgacttcgtctgccCTTGCGGCGCGGTATTCCAATCTCGCGCCAAGTTCCTCTGGCACAAAGAGACGCACGCCGACAAGCCTCGCGCCTGCCTCTACTGCAGCGACAAGTTtgtgcacgcggcttcgctcactcgCCACGTGCGACGCTCGCATAACCAACACTACCTCGCTCAGCACTCCGATAAAAATGATAATGTCACCTGCCCGGTCTGCAAACAGCTATATCTCCGCACAAACCTCCGCGCCCATCTCTTAACGCACAGCGGCAAGCGTCCCTACTCCTGCGTCGTCTGCAACAAAGCGTTCACCACCAAATGGAACCTAAAGCTTCACAGATGGACGCACATGAGCCGCTCAGCCAAACCATTCAAATGCTCACTCTGCAAGGGCGCCTTCATCCGACACACCGAGTATGTCTCGCACATGAACTCGCACAAATCTGTCCGACCCTACACCTGTAACTACTGCGGCTGTCAGTTCATCAGGAAATACAACTGTCAGAGACACGTCAGAGAGCACGAGATGGCGAAGAAGTTTGTATGCAACGTCCCGGAGTGCGGCAAATCGTTCCACCGAAGCTACTACCTCTCTGAGCATATGAAGGTGCACAGCGGGGTGAGGCCGTTCTCTTGTGACATATGCGATAAGACATCGAGCAATAAGTCTAATCATAACAAACATATGAAGATCCACCACGCTAGGGAAATGGTCGCCTCGGAGGCCTAG
- Protein Sequence
- MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSITKTNTSCVSSRTPTPANSERSYRSGSRTPITEDSGTNPWNGSKEHERYWARTPSASSRTPSGTSSRGVSRTPSRTPSRTPSRTARSHSSTNLSRNCTPDMRLVDNLAFETTTVSSSSQNSQSRLSNSPSVIKLDKTHRPYQPPPPPEYDQQYMDYSDQQEDREVKYSRSAEYNALDVNAMYSYNVPMLGTTKIQSVPPPVPRKRNEQTKINSVMKPTNLLNLVKNNIGGMQCLPYMANRTATYPMVQSTPTFVQKNVQNSMVMTSGLPNTQVQIESKSGAPLVQNHFNLPSGTFTPGTTVVTQNSQYFYQEMVQNIDPKSFVPTMPPVFTGHENITNVAQTSSECTRMYQNVMLVDQFGNTSCMYAPQSMIPKVTGAAPLFTESSTRSVNAVVQKQGLIKKDLNKTLIIEVGPILPPQRVSSRASTSTVVQQPRTAIPNVPIISPPKPEAPSISITEKIEKNDIPCTTRGLKILSNIKVEVPVQHIKSMINTVMDLTGSNDAVYPERSRSPEKILPDLDVSKERVMKDFAQPSNAGGDGSHSFELKKFTSATSNKDLNSKTSVDNKIESDFGDSCPVPDLICNEKPSISPCSELSESGDNSVDRPMVSPKPHSSSVIVRKEDYDCRRKAPMKIRLNNIFVRKNKKILQIKNVKTVNSTHEITPVACSSKSVAPENFAAAKIAQSPNRNEKSTLTTISIEEIREKEEASFEDMEPVEEVKMPSKSENINVKEELSCSNECAFSNDAPGPARMGPLDPLRPITVSYGSMSPSDFDDESSNRELLDLEGAKNKQFVTMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNNKEAFSCNIWGEPSTKENEFVLPNFIHESYKIADSGVEYADGGEMRGESKADVPPLNICADERMPPRGEISGQESNGESSWNGMYPEVAPVEHYDLMARESWVSDGSELDVTEKRDNLEEELVFPKARLYACITCGTKHNSLKELRAHKAAEHATATCSKTTYSRLLTARAIKKEKAEDLTCAANLLSIDTKGTITSTILKVYDPDTLEAKPKLGNLRTLLKKEGKRKRRDFVCPTCKVDQVTEPAFTAHLKIHPLECFTCGKLFSRRANLQLHIKTHLGIKDYKCDVCEKRFVTRQKLGEHHNTHTGRAPYKCTFCDDTFRRYSNMVQHRDRHHLHKRVKTRDFVCPCGAVFQSRAKFLWHKETHADKPRACLYCSDKFVHAASLTRHVRRSHNQHYLAQHSDKNDNVTCPVCKQLYLRTNLRAHLLTHSGKRPYSCVVCNKAFTTKWNLKLHRWTHMSRSAKPFKCSLCKGAFIRHTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGVRPFSCDICDKTSSNKSNHNKHMKIHHAREMVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267528;
- 90% Identity
- iTF_01528626;
- 80% Identity
- -