Esil000566.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000001.1:8823065-8832909[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.6 97 4.0 0.3 2 23 6 27 5 27 0.96 2 13 0.01 0.62 10.9 1.5 1 23 1011 1034 1011 1034 0.95 3 13 8.2e-06 0.00048 20.7 0.5 2 23 1139 1160 1138 1160 0.97 4 13 8.7e-05 0.0052 17.4 1.7 1 23 1166 1188 1166 1188 0.98 5 13 0.012 0.71 10.7 3.8 1 23 1194 1216 1194 1217 0.96 6 13 1.6 96 4.0 0.5 5 23 1230 1248 1228 1248 0.96 7 13 0.0072 0.43 11.4 1.2 3 23 1255 1276 1254 1276 0.96 8 13 0.0056 0.33 11.8 0.2 2 23 1293 1313 1292 1313 0.97 9 13 5.7e-05 0.0034 18.0 0.7 1 20 1319 1338 1319 1341 0.92 10 13 0.0055 0.33 11.8 2.0 1 23 1349 1371 1349 1371 0.99 11 13 0.006 0.35 11.7 7.2 1 23 1377 1399 1377 1399 0.98 12 13 8.2e-06 0.00049 20.7 1.1 1 23 1405 1429 1405 1429 0.97 13 13 0.00054 0.032 15.0 5.5 1 23 1435 1457 1435 1458 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGCTCGTGCAGTGTCCCGTGTGCACGCTGTTCCTGCACAATGGCATGTCGCTGGAGTCCCATCTCGACACGCATCCCAAAGATCAAGTCATCAAAGCTCTCTGCAGCATCACCAAAACAAACACCAGCTGTCTCAGCAGCAGAACGCCTACTCCTGCCAACTCCGAGAGATCCTATCGGAGCAGGTCTAGAACCCCCATCACCGAGGACAGCGCTACCAATCCTTGGAATGCATCGAAGGAACATGACCGGTATTGGGCTCGGACGCCCAGTACCTCGAGCAGAACGCAGAGTGGGACGTCCAGCCGGGGAGCCAGTCGGACGCCCAGTCGGACTCCAAGCAGGACTCCAAGCAGGACTCCCAGTAGAACTGCCAGATCTCTATCCTCCGCCAACATGTCAAGAAATTGTACCCCTGACATTAGATTGGTTGATAATTTAGCATTTGAAAATACCACTGTAAGTAGCTCATCACTAAATTCGCAATCTCGCCATTCAAACTCACCGTCACTGATGAAGACAGATAAACCACCGCGGACATACCCATCGGCTAATTTACCGGATTATGATCAGCAGTTCATGGATTACTCGGATCAGCAGGAGGATAGGGAAGTGAAGTATTCCCGAAGTGCTGAATACAATGCTTTGGAGAGCAATAACATGTACGCTTGCAATATGCCAACAATGGCATCTAGTGCTAAAATTCCGACTTTAACTAATTCACTGCCACGTAAGAGAACTGATCAGGTAAAGGCTGGTAGTGCTATGAAGTCTAATAATTTACTCAACCTTGTTAAGAATAACATTGGGGGAATGCAGTGCTTACCCTCTTACTTGGGAAACCGTAGTGCACCCTACATGGTGGCAAATGCCCCCACATTTGTTCAAAAAAATGTTCAGAATAGTATGGTTATGACCAGCGGCCTACCCAATACCCAAGTTCAAATAGAAACTAAAGGGCCCCCATTAGTTCAAAACCATTTCAACCTGGCTCCCGGAAACTTCACACCGGGAACTACTGTGGTAACTCAAAACTCCCAGTACATTTACCAAGAAATGGTGCAAAACATTGACCCCAAATCATTTATCCCCACAATGCCACCCGTGTTCACAGGTCACGAGAACATAACCAATGTGGCTCAAACAAGTTCAGAATGTACAAGAATGTATCAGAATGTGGTGCTTGTCGATCAATTCGGGAACACCTCATGTATGTACACACCACAGCCGATGCTGCCCAAAGCAACCTGTGCTCCGCCACTGTTCAATGCGACCAGTTCTCGGACAATGAACTCATTTGTACAGAAACCTGGTCCGATAAAGAGGGACCCAAACAAAACTCTAATCATAGAAGTGGGACCCATCATGCCCCCTCAGCGGGCGAGCTCCCGGTCCGCCGGGACAAACACCGTGATACCGCACACCAGTAGAGCCTCCGTTCCGAATGTTCCTATTATATCAGCAACAAAACCCGAGGCTCCCAGTATTTCGATTACCGAAAAAATCGAAAGAGTTGATATGCCATGCACAACTAGAGGTCTGAAAATTCTGAGCAATATTAAGGTGGAGGTGCCGGTGCAACACATCAAAAGCATGATAAACACGGTGATGGACCTCACCGGGTCCAACGACGCGCTGTACCCGGAGCGGAGCAGGACTCCCGAGAACATCCTCCCCGACTATGAGGGCGCCAAGGAGCGGGTACTGCACGACTTCGCGCAGCCCCCGCCCACCGGCGAGGGCTCCCACGCGTTCGAACTCAACAAGTTCGCCGGCGCTACCTCGAACAAAGACTTTAATATTAAAACTAGCTGCCTCGACAATAAAGTAGAGAGCGACTTCGGCGACAGCTGCCCGGTCCCGGATCTGATCTGCAACGAGAAGCCTTCCGTGTCGCCGTGCAGCGAGCTCTCCGAGAGCGGCGACAGCGGCGCCGAGCGCGCGCCGCCCTCGCCCAAGCCGCCGCCGCACCACCACACCAGCAGCGTCATCATGCGCAGGGAGGACGTCCTCAATAAAAAGAAAGCACCGATGAAGATAAGACTGAACAATATTTTCGTAAAAAAGAATAAGAAGATCCTCCAGATAAAAAACGCCAGGACGACCGTGAACCGGTGCGAGATCACGCCGGTCGCGTGCTCGTCGACGAGCGTCGCGCCCGAGAGGTTCGCCGCCGCGCAGCTCGCGCACTCCCCGAAGCGGAGCGAGAAGTCCACGCTCACCACCATCTCCATCGAGGAGATCCGCGAGAAGGACGAGGCCGGCTTCGAGGGCATGGAGCCGATGGAGGAGGTCAAGATGCCGGCGGCGAAGGCGGAGGCCGTCAACGTCAAGGAGGAGTTGAGTTGTAGCAACGAGTGCGGGTTCAGCAACGACGCGGCCGGCCCCGCGCGGGACCTCGGCCCTCTGGACCCGCTGCGACCCATCACCGTCAGCTACGGCAGCATGTCGCCCTCGGACTTCGACGACGAATCCAGCAACCGCGAGCTGCTCGACCTCGAGGGCGGGAAGAACAAGCAGTTCGTCAGCATGATGAACGACAACTACTTCGGGGATAATATATACGCGGACTACTTCACCCCGGATCGGGTGGAGGCGTTCGACGACAAGGGCCCGACCGTCTTCAAGGATAACTCTAAGGAGGCCTTCTCCTGCAGCATTTGGGGGGAGCCTTCGTCTAAGGAGAACGAGTTCGTCCTCCCGAACTTCATTCACGAGAGTTATAAGATAGCGGAGAATGGGGAGTATGCGGATGGGGCAGACGTGCGAGGGGACACTAAAGCGGACGTTCCTCCGCTGAACATATGTGCGGACGAGCGGATGCCGCCGCGCGGAGAGATCAGCGGACAGGAGAGCAACGGCGATATGGAATCCTCTTGGAACGGGATGTATCCAGAAGTGACGCCAGCGGAGCCCTACGATCTGATGGCTCGTGAGAGCTGGGTGTCTGATGGGTCTGAACTAGATGTTACGGAGAAAAGAGACACACTGGAAGAAGAATTAGTTTTCACGAAAGCGCGAATGTATACTTGCGTAACTTGTGGCACTAAGTACCACACTCTGAAGGAATTGCGCGCTCACAAGGCATCTGAGCACGCATTGCCGACGTGCTCTAAAACCAGTTACAGCCGGTTATTGACTGCTAGAGCTATAAAGCGGGAGAAGGCAGAAGATTTGACTAGTGCAGCCAATATCCTCACCATAGACACGAAAGAGAGCATAACATCGACCATCCTGCAAGTGTACGATCCGGATCCAATATCGGAAGCCAAGCCTAAGATCGATGGGCTCACTACCCTCATCAAGAAGGAAACCAAGAGGAAACGCAAGAACTTTATCTGTCCTACGTGTAAAGTAGATCAGTTGACAGAACCACAATTCACGGCTCACCTGAAGATCCATCCTTTGGAATGTTTGACTTGCGGGAAACTGTTCTCTCGGCGAGCCAACTTGCAGCTTCACATCAAGACACATTTGGGCATCAAGGACTACAAATGCGACGTGTGCGGCAAACGATTCGTGACGCGACAGAAGCTAGGCGAGCACCACAACGTGCATACCGGACGCACTCCCTACAAATGTACCTTCTGCGACGACGCATTCCGGAGATACTCCAATATGGTGCAGCACAGAGATCGCCACCATCTACACAAGCGAGCGAAAACCCGTGACTACGTATGCCACTGCGGCGCTGTATTCCAGTCTCGCGCTAAATACATCTGGCATTCTGAGACGCATGCAGACAAGCCCCGCGCTTGTATGTATTGTAGCGACAAGTTCGTCCACGCTGCCTCTCTTACAAGACACATCCGGAGATCACATAACGCTATGTATATGTCGTCAGCTAGCCGAATCAAGCATGATAATGTTACTTGTCCTATATGCAAGCAGGTATACCTCCGCACCAACCTGCGAGCCCATCTCCTCACTCACAGCGGCAAGCGTCCCTACTCGTGCGTCATCTGCAACAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCATCGCTGGACACACATGAGCCGATCCGCGAAGCCCTACAAATGTTCCCTCTGCAAGGGAGCCTTCATCCGACACACGGAGTATGTATCGCACATGAACTCACACAAATCCGTCCGCCCCTACACTTGCAACTACTGCGGCTGTCAGTTCATAAGGAAATACAACTGTCAACGACACGTCAGGGAGCACGAGATGGCCAAAAAGTTTGTATGCAACGTCCCCGAGTGCGGGAAATCATTTCACCGAAGTTATTATCTGTCGGAACATATGAAGGTGCATAGCGGCGCGCGACCGTTTTCGTGCGATATTTGCGATAAAACTTCAAGCAATAAGTCTAATCATAATAAGCATATGAAGATACATCATGCTAGGGAATTGGTCGCTTCGGAGGCCTAA
- Protein Sequence
- MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSITKTNTSCLSSRTPTPANSERSYRSRSRTPITEDSATNPWNASKEHDRYWARTPSTSSRTQSGTSSRGASRTPSRTPSRTPSRTPSRTARSLSSANMSRNCTPDIRLVDNLAFENTTVSSSSLNSQSRHSNSPSLMKTDKPPRTYPSANLPDYDQQFMDYSDQQEDREVKYSRSAEYNALESNNMYACNMPTMASSAKIPTLTNSLPRKRTDQVKAGSAMKSNNLLNLVKNNIGGMQCLPSYLGNRSAPYMVANAPTFVQKNVQNSMVMTSGLPNTQVQIETKGPPLVQNHFNLAPGNFTPGTTVVTQNSQYIYQEMVQNIDPKSFIPTMPPVFTGHENITNVAQTSSECTRMYQNVVLVDQFGNTSCMYTPQPMLPKATCAPPLFNATSSRTMNSFVQKPGPIKRDPNKTLIIEVGPIMPPQRASSRSAGTNTVIPHTSRASVPNVPIISATKPEAPSISITEKIERVDMPCTTRGLKILSNIKVEVPVQHIKSMINTVMDLTGSNDALYPERSRTPENILPDYEGAKERVLHDFAQPPPTGEGSHAFELNKFAGATSNKDFNIKTSCLDNKVESDFGDSCPVPDLICNEKPSVSPCSELSESGDSGAERAPPSPKPPPHHHTSSVIMRREDVLNKKKAPMKIRLNNIFVKKNKKILQIKNARTTVNRCEITPVACSSTSVAPERFAAAQLAHSPKRSEKSTLTTISIEEIREKDEAGFEGMEPMEEVKMPAAKAEAVNVKEELSCSNECGFSNDAAGPARDLGPLDPLRPITVSYGSMSPSDFDDESSNRELLDLEGGKNKQFVSMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNSKEAFSCSIWGEPSSKENEFVLPNFIHESYKIAENGEYADGADVRGDTKADVPPLNICADERMPPRGEISGQESNGDMESSWNGMYPEVTPAEPYDLMARESWVSDGSELDVTEKRDTLEEELVFTKARMYTCVTCGTKYHTLKELRAHKASEHALPTCSKTSYSRLLTARAIKREKAEDLTSAANILTIDTKESITSTILQVYDPDPISEAKPKIDGLTTLIKKETKRKRKNFICPTCKVDQLTEPQFTAHLKIHPLECLTCGKLFSRRANLQLHIKTHLGIKDYKCDVCGKRFVTRQKLGEHHNVHTGRTPYKCTFCDDAFRRYSNMVQHRDRHHLHKRAKTRDYVCHCGAVFQSRAKYIWHSETHADKPRACMYCSDKFVHAASLTRHIRRSHNAMYMSSASRIKHDNVTCPICKQVYLRTNLRAHLLTHSGKRPYSCVICNKAFTTKWNLKLHRWTHMSRSAKPYKCSLCKGAFIRHTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGARPFSCDICDKTSSNKSNHNKHMKIHHARELVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267528;
- 90% Identity
- iTF_00737739;
- 80% Identity
- -