Cpec008085.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- ZNF296
- Assembly
- GCA_951394395.1
- Location
- OX596357.1:1626867-1638269[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.6 1.5e+02 3.5 0.4 2 23 6 27 5 27 0.96 2 14 3.2 1.8e+02 3.3 0.5 1 23 1006 1029 1006 1029 0.89 3 14 5.6 3.2e+02 2.5 0.0 1 23 1110 1132 1110 1132 0.92 4 14 5.8e-06 0.00033 21.3 0.8 2 23 1135 1156 1134 1156 0.96 5 14 0.00033 0.019 15.8 2.7 1 23 1162 1184 1162 1184 0.99 6 14 0.014 0.78 10.7 3.8 1 23 1190 1212 1190 1213 0.96 7 14 2.3 1.3e+02 3.7 0.3 5 23 1226 1244 1225 1244 0.96 8 14 0.0072 0.41 11.6 1.1 3 23 1251 1272 1250 1272 0.96 9 14 0.0016 0.09 13.7 0.3 2 23 1288 1308 1287 1308 0.97 10 14 0.00011 0.0062 17.3 0.4 1 20 1314 1333 1314 1336 0.91 11 14 0.0099 0.57 11.2 1.4 1 23 1344 1366 1344 1366 0.98 12 14 0.0068 0.39 11.7 7.2 1 23 1372 1394 1372 1394 0.98 13 14 9.3e-06 0.00054 20.7 1.1 1 23 1400 1424 1400 1424 0.97 14 14 0.00061 0.035 15.0 5.5 1 23 1430 1452 1430 1453 0.96
Sequence Information
- Coding Sequence
- ATGGATCAGCTCGTGCAGTGCCCCGTATGCACGCTCTTCCTGCACAACGGGATGACCCTGGAGTCCCACCTCGACACGCATCCCAAAGATCAAGTGATCAAAGCTCTCTGCAGCATCACCAAAATAAACACCAGCTGTGTCAGTAGCAGAACGCCTACTCCTGCTAATTCCGAGAGGTCTTACAGGAGCAGGTCTAGAACACCCATCAATGAGGACAGTGGAACTAATCCTTGGAATGGAACAAAAGACCATGAACGGTACTGGGCTAGGACACCCAGTGCCTCCAGCAGAACCCCTAGTGGGACTTCTAGCCGTGGAGTCAGTCGGACACCCAGTAGGACCCCTAGCAGAACCCCCAGCAGGACCCCCAGTAGAACTGCCAGATCTCTCTCATCAACCAACATGTCGAGAAACTGTACTCCTGATATGAGATTAGTTGATAACTATGCATTTGATTCTTCATCACAAAACTCACAGTCTCGCCTTTCCGACTCACCTTTACTGATGAAATCTGATAAACCACCTCGAACATACCCTCCAGCTGCAATACCAGATTACGATCAGCAGTACATTGATTACTCGGACCAGCAGGAAGACAAGGAAGTGAAGTATTCTCGAAGTGCTGAATATAATGCTTTGAATGTCAACAACATGTTCTCCTACAATGTGCCAATGGTTGCGACTGGTAGTAAAATTCAGTCGATGCCTCCTCATGTGTTGCAGCGGAAGAGAAATGAACCTGTCAAGGTTGCCAATGCTGTGAAGTCAAATAACTTACTCAACcttgttaaaaataacattggCGGAATACAGTGTTTACCTCCTTACTTGGCTAACCGTAGTGCACCATACCAAATGGTGCCCAATGCCCCTACATTTCTTCAGAAAAATGTGCAGAATAGTATGGTAATGACCAGTGGCTTACCCAACACCCAAGTTCAAATTGAAACCAAAAGTGGGCCTCCATTAGTTCAAAACCACTTCAATTTAAGCACTGGTGCTTTCACCCCAGGAACTACAGTGGTAACTCAGAACTCTCAATACTTTTATCAAGAAATGGTGCAAAACATTGACCCTAAATGTTTTGTACCTACAATGCCACCTGTATTCACAGGTCATGAGAATATAACAGCTAATGTTGCCCAAACAAGTTCCGAATGCACTAGAATGTATCAAAATGTGATGCTTGTTGATCAGTTCGGGAATACTTCCTGTATGTACACACCTCAATCAATGATGCCCAAAGCAACCTGTGCCCCTCCACTGTTTGCCGAGAGTAATACTCGGCCAGTAAATGCATTTGTGCAGAAACCCGGTCTAGGGAAGAAAGATCCAAGCAAGACACTCATTATAGAAGTAGGTCCTATACTGCCTTCTCAGCGAACAAGCTCTCGATGCTCTGCAAATCCTGTAGTCCCAACTAGAGCTTCTGTCCCCAATGTTCCTACAATATCTCCACCTAAACCTGAGGCTCCCAGTATTTCTATAACTGAGAAGGTGGAAAAAACGGAAGGCCCATCTCCAACTAGGGGTCTTAAGATTATAAGCAATATCAAGGTAGAAGTTCCAGTGCAGCACATAAAAAGCATGATAAACACTGTGATGGACCTGACCGGTTCAAACGACGCGGTGTACCCTGATCGGAGCAGGTCTCCTGAAAAGATCTTGCCCGATTTAGACGTCAGCAAAGATAGAGTGCTAGATGACTTCGCGCAGCCCTCGACCGCTGACGGCGATACCTCCCATTCGTTTGAACTAAAAAAGTTCGAAAGTGCTACCTCAAATAAAGACTTAAATAGTAAAACTAGTAGCgtagataataaaatagaaaccgACTTTGGCGACAGCTGTCCGGTGCCAGATCTGATTTGCAACGAGAAGCCTTCTATCTCGCCATGTAGCGAGCTCTCGGAGAGCGGTGATAACTCCGTCGATCGCACCTTGGTTTCCCCCAAGCCTCACTCCAGCGGAGTTATCGTAAGGAAGGAAGATTACGATTATAGAAAGAAAGCGCCGATGAAGATAAGACTGAACAACATTTTCGTGAGAAAGAACAAAAAAGTTCTCCAAATAAAAAACGCTAAAGCGGCCGTGAGTCGATGCGAGATCACCCCCGTCGCGTGCTCGTCCAAAAGCGTAGCCCCTGAGAACTTCGCCGCCGCAAAGATAGCTCAGTCTCCGAAGCGCAACGACAAGTCAACGCTTACGACTATTTCTATCGAGGAAATCAAAGAAAAGGTAGAAACCCCCTTCGAAGAAATAGAAGTGGAAGAGGTCAAGATGCCGCCGGCTCCAGCTAAATCCGAGGCGATTCCAGTGAAGGAGGAATGTTGTTCCAGCAACGAGTGTGCGTTTAGTAACGAGGCCTCCGAGCCGGCGCGAGAAATAGGCCCTATGGACCCGCTTCGACCCATCACAGTCAGCTACGGTAACATGTCCCCTTCAGACTTCGACGACGAGTCTAGCAATCGGGAGCTACTAGATCTGGAAGGCGGAAAGAACAAGCAGTTCGTCAGCATGATGAACGACAACTACTTTGGTGATAACATCTACGCGGACTACTTCACCCCAGACCGAGTGGAAGCCTTCGACGACAAAGGGCCTACTGTTTTCAAGGACAATTCTAAAGAAGCGTTCTCATGCAACATTTGGGGGGAGCCTTCGTCTAAAGAGAACCAGTTTGTTCTCCCAAATTTCATTCACGAAAGTTACAAGATTGCTGACAATGGGGTGGAGTATGCTGATGGAGAGGACGTGAGAGAGGAAAGCAAAGCGGATGTTCCGCCGTTGAACATATGCGCCGATGAGCGGATGCCGCCGCGTGGTGAGATCAGCGGCCAGGAAAGCAACGGAGACATGGAATCGTCATGGAATGGGATATATCCCGAGGTGAGTCCGTCTGAGCCGTACGACCTCATGGCGCGGGAGAGCTGGGTGTCAGACGGATCCGAGCTCGACGTCACCGACAAGAGAGACAACCTGGAGGAAGAGCTGGTGTTCCCCAAAGCGCGCATGTACGCGTGCCTGACGTGCGGCACCAAGCACAACTCTCTCAAGGAGTTGCGCGCGCACAAGGCGGCCGAGCACGCCACACCCACGTGCTCTAAGACCACCTACAGCCGACTGCTGACTGCGCGAGCTATCAAGAAGGAGGAGAAAGTTGATGACTTGACCTGCGCTGCCAACATCCTCGCAATCGACAGCAAGGAGAGTATAACATCGACTATACTGCAAGTGTACGACCCGGAGGGGATAGAAGAGGCTAAGCCGAAGCTGGGCAATCTGCGCACGTTGCTAGCGAAGGAGGGCAAACGGAAACGCAGGGACTTTGTCTGCCCTACCTGTAAAATAGACCAGGTGACAGAGCCGGCTTTCTCCGCGCACCTCAAGATCCACCCGCTGGAATGTCTCACCTGCGGGAAGTTCTTCTCGAGGCGCGCCAACCTCCAGCTACACGTGAAGACGCACCTCGGGATCAAGGACTACAAATGCGACATCTGCGAGAAGCGTTTCGTGACGCGGCAGAAGCTCGGCGAGCACCACAACACTCACACGGGCCGCGCTCCCTACAAGTGCACCTTCTGCGACGACGCCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGGCATCACTTGCACAAGCGTGCGAAAACCCGCGACTTCGTCTGCCAGTGCGGGGCCGTGTTCCAATCGCGCGCCAAGTACCTCTGGCACAAGGAGACGCACGCGGACCGGCCGCGCGCCTGCCTCTACTGCAGCGACAAGTTCGTGCACGCGGCCTCGCTCACCCGGCACATACGCCGCTCCCACAACGAGCTGTACCTGGCGCACAACCAAGGCAACAACGACAACGTCACCTGTCCTATATGCAAGCAGGTGTACCTGCGCAGTAACCTGCGCGTGCACCTCCAGACGCACAGCGGGAAGCGTCCCTACGCCTGCGTGATCTGCAACAAGGCGTTCACCACCAAGTGGAACCTGAAACTTCACCGCTGGACGCACATGTCGCGCTCCTCGAAACCGTACAAGTGCACGCTATGCAAGGGCGCGTTCATTCGGCACACGGAATACGTTTCCCACATGAACGCGCACAAGTCCGTCCGACCGTACACGTGCAATTACTGTGGATGTCAGTTCATCAGGAAGTATAACTGCCAGCGGCATGTCCGGGAGCACGAAATGGCCAAGAAGTTTGTATGCAACGTACCGGAGTGCGGTAAGTCGTTTCATCGGAGCTACTATCTGTCGGAACATATGAAAGTTCATAGCGGTGCTAGGCCGTTCTCTTGTGATATATGCGATAAAACATCGAGCAATAAATCAAATCATAACAAACATATGAAGATACATCACGCTAGGGAAATGGTCGCGTCTGAAGCCTAG
- Protein Sequence
- MDQLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCSITKINTSCVSSRTPTPANSERSYRSRSRTPINEDSGTNPWNGTKDHERYWARTPSASSRTPSGTSSRGVSRTPSRTPSRTPSRTPSRTARSLSSTNMSRNCTPDMRLVDNYAFDSSSQNSQSRLSDSPLLMKSDKPPRTYPPAAIPDYDQQYIDYSDQQEDKEVKYSRSAEYNALNVNNMFSYNVPMVATGSKIQSMPPHVLQRKRNEPVKVANAVKSNNLLNLVKNNIGGIQCLPPYLANRSAPYQMVPNAPTFLQKNVQNSMVMTSGLPNTQVQIETKSGPPLVQNHFNLSTGAFTPGTTVVTQNSQYFYQEMVQNIDPKCFVPTMPPVFTGHENITANVAQTSSECTRMYQNVMLVDQFGNTSCMYTPQSMMPKATCAPPLFAESNTRPVNAFVQKPGLGKKDPSKTLIIEVGPILPSQRTSSRCSANPVVPTRASVPNVPTISPPKPEAPSISITEKVEKTEGPSPTRGLKIISNIKVEVPVQHIKSMINTVMDLTGSNDAVYPDRSRSPEKILPDLDVSKDRVLDDFAQPSTADGDTSHSFELKKFESATSNKDLNSKTSSVDNKIETDFGDSCPVPDLICNEKPSISPCSELSESGDNSVDRTLVSPKPHSSGVIVRKEDYDYRKKAPMKIRLNNIFVRKNKKVLQIKNAKAAVSRCEITPVACSSKSVAPENFAAAKIAQSPKRNDKSTLTTISIEEIKEKVETPFEEIEVEEVKMPPAPAKSEAIPVKEECCSSNECAFSNEASEPAREIGPMDPLRPITVSYGNMSPSDFDDESSNRELLDLEGGKNKQFVSMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNSKEAFSCNIWGEPSSKENQFVLPNFIHESYKIADNGVEYADGEDVREESKADVPPLNICADERMPPRGEISGQESNGDMESSWNGIYPEVSPSEPYDLMARESWVSDGSELDVTDKRDNLEEELVFPKARMYACLTCGTKHNSLKELRAHKAAEHATPTCSKTTYSRLLTARAIKKEEKVDDLTCAANILAIDSKESITSTILQVYDPEGIEEAKPKLGNLRTLLAKEGKRKRRDFVCPTCKIDQVTEPAFSAHLKIHPLECLTCGKFFSRRANLQLHVKTHLGIKDYKCDICEKRFVTRQKLGEHHNTHTGRAPYKCTFCDDAFRRYSNMVQHRDRHHLHKRAKTRDFVCQCGAVFQSRAKYLWHKETHADRPRACLYCSDKFVHAASLTRHIRRSHNELYLAHNQGNNDNVTCPICKQVYLRSNLRVHLQTHSGKRPYACVICNKAFTTKWNLKLHRWTHMSRSSKPYKCTLCKGAFIRHTEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGARPFSCDICDKTSSNKSNHNKHMKIHHAREMVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267528;
- 90% Identity
- -
- 80% Identity
- -