Ecor016437.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- -
- Assembly
- GCA_947095575.1
- Location
- OX352706.1:11768855-11782243[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 75 4.2 0.4 2 23 6 27 5 27 0.96 2 13 2.3 1.2e+02 3.6 0.0 1 23 1136 1158 1136 1158 0.97 3 13 2.2e-06 0.00011 22.6 0.9 2 23 1161 1182 1160 1182 0.97 4 13 0.0073 0.36 11.5 2.7 1 23 1188 1210 1188 1210 0.97 5 13 0.00026 0.013 16.0 4.7 1 23 1216 1238 1216 1239 0.96 6 13 0.74 37 5.2 0.2 5 23 1252 1270 1251 1270 0.96 7 13 0.002 0.1 13.2 0.7 3 23 1277 1298 1276 1298 0.97 8 13 0.0094 0.47 11.1 0.2 2 23 1315 1335 1314 1335 0.97 9 13 0.0001 0.0052 17.3 0.4 1 20 1341 1360 1341 1363 0.91 10 13 0.024 1.2 9.8 2.3 1 23 1371 1393 1371 1393 0.98 11 13 0.0065 0.33 11.6 7.2 1 23 1399 1421 1399 1421 0.98 12 13 9.2e-05 0.0046 17.5 0.5 1 23 1427 1451 1427 1451 0.97 13 13 0.00059 0.029 14.9 5.5 1 23 1457 1479 1457 1480 0.96
Sequence Information
- Coding Sequence
- ATGGACCAGCTCTTACAGTGCCCCGTCTGCACGCTCTTCCTGCACAATGGCATGTCGCTGGAGTCTCATCTCGACACGCATCCCAAAGACCAAGTGATCAAAGCTCTCTGCAGCATCGCTAAAGCTAATGTCTGCTGTATCAGTAGTAGAACACCTACCCCTGCTAATTCCGAGAGGTCTTATAGGAGTAGGTCTAGAACGCCCATTACAGAAGACAGTGGAACTAATTCTTGGAATGGAACGAAAGACCATGAACGGTACTGGACTCAAACACCGAGTGCGTCCAGCAGGACTCCAAGTGGGACGTCCAGTCGAGGGGCTAGTCGGACCTCCAGCACCAGGACTCCCAGTAGAACTCCCAGTAGGACTCCGAGTAGGACTCCCAGTAGGACCCCCAGTAGAACTGCCAGATCTAGTTCATCAGCTAACATATCAAGAAACTGTACTCCTGATATGAGATTGGTTGACAGTTTGGCGTTTGAAAATACAACAGTTAGTAGCTCATCACAAAATTCTCAATCTCGCCAATCAAACTCACCTTCACAGATGAAGTCGAATAAACCTCAGCGGACATACCCACCTGCTGCTATACCGGATTATGATCAACAGTTTATAGATTATTCTGACCAACAGGAGGACAGGGAAGTAAAGTATTCTCGTAGTGCTGAGTACAATGCCCTGGATGCCAATAATATGTATTCTTACAATGTGCCAATGATTGGGTCTGGTAGTAAAACTCGGTCTTCTCCACCTCATACATTGCCACGGAAAAGGAATGTGCAAGTGAAAGCTAGCAGTACTATGAAGTCAAACAATTTATTGAACCTAGTTAAAAATAACATTGGTGGAATGCAATGTGTAACTCCTTACGTGGAGAACCGTGCAACCTACCATGTGGTAGGGACTAACCCTACATTTGTTCAGAAGAATGTGCAAAATAGTATGGTAATGACCAGCGGGTTACCCAACACTCAAGTTCAAATAGAAGCCAAAGGGAACCCACTAGTACAAAACCACTTTAATCTGGCAAGTGGAAACTTCACTCCAGGAACTACAGTGGTTACCCAAAACTCCCAGTACATTTACCAAGAAACAGTGCAGAATATTACCCCCAAATCCTTTATCCCCACAATGCCACCTGGTTTCACAGGCCATGAGAATATAACTAATGTTGCTCATGCTCAAACAAGTTCAGAATGTACAAGAATGTATCAGAATGTGATGCTTGTTGATCAATTTGGGAACAGTTCCTGCATGTATACACCTCAGCCGATGCTGTCCAAAGCAACATGTGCTCCTCCACTGTTCAGTGAAAGTACTTCACGGACAGTGAATACATTAGTTCAGAAACCTGGGCCAATGAAGAAGAACCCAAACAAGACTCTGATCATAGAAGTGGGTCCTATAGTGCCTCCACAGAGAGTGAGCTCTCGTTCCTGTGGTACAAACACTGTGCTATCACAGGTAAGAGCTCCTGTTCCCAACACTCCTATTATATCTACGCCAAAACCTGAGGCTCCCAGTATTTCAATCACTGAAAAAACTGAAGTGCCCTGCACTGCAAGAGGCCTGAAGATTCTGAGCAATATAAAGGTGGAAGTCCCTGTGCAGCACATGAAGAGCATGATTAACACCATGATGGACCTGACCGGCTCCAACGACGCGGTCTATCCTGATCGGAGTAGGACTCCCGAAAAGATCTTGCCCGATTATGATGTAGGCAAGAAAAGGGTGTTGCATGATTTCGCGCAGCCGTCGACCGCTGGCGGTGATGGTTTCCACTCGTTTGAACTAAAAAAGTTCGCCAGTGCTACCTCAAATAAAGACTTTAATAATAAAACTAGTAGTGTAGATAATAAACTAGAATCCGACTTCGGCGATAGCTGTCCGGTGCCGGACCTGATATGTAACGAGAAGCCTTCCATCTCGCCGTGCAGCGAGCTCTCCGAGAGCGGAGACAACTCTGTGGAACGCAGGCTGCCGTCCCCCAAGCCCCAGGCTCACACCAGCAGTGTCATCATGCGCCGGGAAGAAGTACTCATTAAAAAGAAAGCGCCAATGAAGATAAGACTGAACAATATTTTCGTCAGAAAGAACAAAAAAATACTGCAAATAAAAAACGCTAAAGACCCGGCCCCGAACCGATGCGAGGTCACCCCCATCGCGTGCTCGTCGAAAAGCGTCGGGCCCGAGAACTTCGCGGCTGCGAACATTGCCCACTCTTCGAAACGGACCGAGAACTCTACGCTCACGACTATTTCTATCGAGGAGATCAGGGAGCAAGATGAAACTGACTTTGAAGATATGGATCCGGTGGAAGAGGTGAAGATGCCGCTGCCGTCGGCGAAATGCGAGGCTGTCAACGTGAAGGAAGAGTTAAGTTGTAGCAACGAGTGTGTTTTCAGTAACGAGGAGCCCGGTCCGGCGCGGGAATCGGACTCCTTGGACCCCCTGCGGCCCATCACGGTCAGCTACGGCAGCATGACTCCTTCAGACTTCGACGACGAATCTAGCAACCGCGAACTGCTAGACCTCGAGGGCGGGAAGAACAAGCAGTTCGTCAACATGATGAACGATAACTACTTCGGAGATAATATATACGCAGACTACTTCACCCCAGACCGGGTGGAAGCTTTCGACGACAAAGGACCTACGGTTTTCAAAGATAACTCTAAAGAAGCGTTCTCTTGCAGCATTTGGGGAGAGCCTTCGTCTAAGGAGAACGAGTTTGTTCTCCCCAACTTCATTCACGAGAGTTATAAGATAGCGGAAAATGGGGAGTATGCTGATGGGGACGTGGGAAGGGACAGTAAAGCGGATGTTCCACCGCTGAACATTTGCGCGGACGAGCGAATGCCGCCGCGCGGCGAGATCAGCGGGCAAGAGAGCAACGGAGATATGGAATCCTCATGGAACGGGATGTATCCCGAAGTGACTCCGGCAGAGCCCTACGACCTCATGGCTCGAGAGAGCTGGGTATCCGACGGCTCAGAGCTGGACGTCACGGAGAAGAGAGACACACTCGAGGAAGAATTGGTATTCCCCAAGGCGCGAATGTACACGTGTCAGACATGCAGTACCAAGCACCACTCTCTGAAGGAGTTGCGCGCTCACAGGGCAGCCGAGCACCCCTCGCCGACATGCTCAAAGACCAGCTACAGCCGGCTACTCACCGCACGAGCTATCAAAAAGGAGAAGGCAGAAGACTTGACTTGCGCAGCCAATATCTTGAAAATAGACACAAAGGACAGTATAACATCGACCATCCTGCAAGTGTACGAGCCGGACCCCATAGTGGAGGCCAAGCCTAAGATCGACAGTCTGCGCGCTGCGCCCACGCCGCTTCCGCTGCCGCTTCCGGTCAAGCAGTTCATCAAGAAGGAGACGAAGAGGAAACGCAGGGATTTTGTCTGTGCTACATGTAAAGTTGACCTGGTAACTGAGCCCCTTTTCTCAGCGCATCTTAAAATCCACCCTCTCGAGTGCCTCACGTGCGGGAAGTTCTTCACGCGGCGAGCAAATCTTAATCTACACATCAAGACACATCTCGGCATCAAGGACTATAAATGCGATATCTGCTCGAAGAGGTTTATGACGCGGCAGAAGCTCGGCGAGCATCACAACGGGCACACCGGCCGTACTCCCTACAAGTGCACCTTCTGTGATGAATCCTTCAGGCGGTATTCCAACATGGTGCAACATCGAGATAGGCACCACCTGCAGAAGCGGGCGAAGAGCCGCGACTTCGTGTGCCAGTGCGGCGTGGTGTTCCAGTCCCGCGCCAAGTACCTGTGGCACCTGGAGACGCACGCCGACAAGCCGCGCGCGTGCCCCTACTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACCCGCCACGTGCGCCGCTCCCACAACGACATGTACCTCTCCACTTACACCAAGCACAACAACGACAACGTCACCTGTCCTATATGCAAGCAGGTGTACCTCCGAACCAACCTCCGCGTGCACCTGCTGACGCACAGCGGCAAGCGCCCCTACGCCTGCGTCATCTGCAACAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACTCACATGAGTCGCTCCTCGAAGCCCTACAAGTGCACTCTCTGCAAGGGCGCGTTCTTCCGACACACGGAGTACATATCCCACATGAACGCGCACAAGTCGGTCCGTCCGTACACTTGCAACTACTGCGGCTGTCAGTTCATCAGGAAATACAACTGTCAGAGACACGTCAGAGAACATGAAATGGCTAAAAAGTTTGTATGCAACGTCCCGGAGTGCGGGAAGTCGTTCCATAGAGGTTACTACCTCGCGGAGCATATGAAGGTGCATAGTGGAGCTAGGCCGTTCTCCTGCGATATTTGTGATAAGACGTCTAGTAACAAATCTAATCATAATAAGCATATGAAGATACATCATGCTAGAGAAATGGTCGCTTCCGAAGCCTAG
- Protein Sequence
- MDQLLQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSIAKANVCCISSRTPTPANSERSYRSRSRTPITEDSGTNSWNGTKDHERYWTQTPSASSRTPSGTSSRGASRTSSTRTPSRTPSRTPSRTPSRTPSRTARSSSSANISRNCTPDMRLVDSLAFENTTVSSSSQNSQSRQSNSPSQMKSNKPQRTYPPAAIPDYDQQFIDYSDQQEDREVKYSRSAEYNALDANNMYSYNVPMIGSGSKTRSSPPHTLPRKRNVQVKASSTMKSNNLLNLVKNNIGGMQCVTPYVENRATYHVVGTNPTFVQKNVQNSMVMTSGLPNTQVQIEAKGNPLVQNHFNLASGNFTPGTTVVTQNSQYIYQETVQNITPKSFIPTMPPGFTGHENITNVAHAQTSSECTRMYQNVMLVDQFGNSSCMYTPQPMLSKATCAPPLFSESTSRTVNTLVQKPGPMKKNPNKTLIIEVGPIVPPQRVSSRSCGTNTVLSQVRAPVPNTPIISTPKPEAPSISITEKTEVPCTARGLKILSNIKVEVPVQHMKSMINTMMDLTGSNDAVYPDRSRTPEKILPDYDVGKKRVLHDFAQPSTAGGDGFHSFELKKFASATSNKDFNNKTSSVDNKLESDFGDSCPVPDLICNEKPSISPCSELSESGDNSVERRLPSPKPQAHTSSVIMRREEVLIKKKAPMKIRLNNIFVRKNKKILQIKNAKDPAPNRCEVTPIACSSKSVGPENFAAANIAHSSKRTENSTLTTISIEEIREQDETDFEDMDPVEEVKMPLPSAKCEAVNVKEELSCSNECVFSNEEPGPARESDSLDPLRPITVSYGSMTPSDFDDESSNRELLDLEGGKNKQFVNMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKDNSKEAFSCSIWGEPSSKENEFVLPNFIHESYKIAENGEYADGDVGRDSKADVPPLNICADERMPPRGEISGQESNGDMESSWNGMYPEVTPAEPYDLMARESWVSDGSELDVTEKRDTLEEELVFPKARMYTCQTCSTKHHSLKELRAHRAAEHPSPTCSKTSYSRLLTARAIKKEKAEDLTCAANILKIDTKDSITSTILQVYEPDPIVEAKPKIDSLRAAPTPLPLPLPVKQFIKKETKRKRRDFVCATCKVDLVTEPLFSAHLKIHPLECLTCGKFFTRRANLNLHIKTHLGIKDYKCDICSKRFMTRQKLGEHHNGHTGRTPYKCTFCDESFRRYSNMVQHRDRHHLQKRAKSRDFVCQCGVVFQSRAKYLWHLETHADKPRACPYCSDKFVHAASLTRHVRRSHNDMYLSTYTKHNNDNVTCPICKQVYLRTNLRVHLLTHSGKRPYACVICNKAFTTKWNLKLHRWTHMSRSSKPYKCTLCKGAFFRHTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRGYYLAEHMKVHSGARPFSCDICDKTSSNKSNHNKHMKIHHAREMVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267528;
- 90% Identity
- -
- 80% Identity
- -