Bcul003578.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus cullumanus
Gene Symbol
-
Assembly
GCA_014737535.1
Location
JACXIX010000035.1:5206028-5212342[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0046 0.43 11.2 0.6 1 23 688 710 688 710 0.97
2 10 0.0017 0.16 12.6 0.1 2 23 801 822 800 822 0.96
3 10 0.032 3 8.5 0.5 3 23 996 1016 994 1016 0.96
4 10 0.022 2 9.1 0.2 1 20 1100 1119 1100 1121 0.94
5 10 4.3 4e+02 1.8 0.1 1 23 1189 1211 1189 1211 0.95
6 10 0.57 53 4.6 0.5 1 12 1218 1229 1218 1237 0.88
7 10 0.096 9 7.0 0.3 1 19 1259 1277 1259 1281 0.93
8 10 0.17 16 6.2 1.5 1 19 1739 1757 1739 1759 0.94
9 10 5.5e-05 0.0052 17.2 1.4 1 23 1930 1952 1930 1953 0.96
10 10 0.25 23 5.7 0.5 1 23 1955 1977 1955 1977 0.95

Sequence Information

Coding Sequence
ATGAAAATTTCTAATGAAGAATTATTTTCTTCACATCATTTGATTGATAATTACTCAGAGCAAGTAATTAACATGTCATTACCATTACCAAAGCCAAAACCTAAAGGTTCTAATGGAAAATACAACAAAATTCAAGATACTAGTTATATATTCAGGGAAAGATCAAGAAGTAATAGGTTGAAACAATTGTTAAGAAGAGGAGATACATTAGAGCATTTGTGTAAATTATTGTGTAAGCCAGTTATTGTGAATGTTACAAAATTATCAGTATCAGAGATAAAACAATGGTGTAAAAAAGACTTGCATCAATCTCAAGCAGAAAATATATTAACACAGAAAAAAAAATTTAAACGAAGGATACAACAAAGAAGATTCTATAAAAGAAAGAAAAAGTCCAAACAGGAGCAGTTATCTTGCTTCTTATGTAATTCTAAAAATGAAGTTACACCTCAAAAAATGTTATTTTCCAAGAAAGCAAAAATTAAAAATGAGAATTTTATAAAAAATTTATTAGAAGATGTTAAACAACCACATATAAAATTACAAAGAATAGATGAAGTAATCAATAAAATAGCACAGTCATTTAGCAGAGTACCTCCGATTAAGGAATGTGAAACAAGTATTCAAACAGAAGAAACTCAAACTGAATTAAGTATATTTGCATCAGAACAACTAAAATTATCATTTGTAAATATCGATACAGATAAATATCAACAAAATCTTGATACTGAGACAATAGCAATTAGGTCTTGTGCAAATGAGACTCTACAATTGAATAAATATGCAGATTCAGATTCAGATTCAGATTCAGATTTTAATACTAATTCTGATTCTAAATCTAATTCTGATTTTGATTCTAATACTGGAAATTCTAGGAATACTAATGAAAGGAAACATAGAATTATATATAATTCTTATACAAATGATAATAATCATTACAATAAGAGCCATGCAAATAATGCAAGAATAATTTCGAATAAATTAAAGAGGTTAAGGAGCAATTCATCAAACAAAATAAGCAAAATTAACCAAGTAAATGAAAAATGCAATATTATTAAGAAAAGATGTACAAGTAAAAATTCATTGTTTCAAGCACCGCAAAGACCAAGTATATTAGACCGTATATCTGCGCTATGTGATCCTGATGATGATGATGATGATGATGAAAGTACTAAAGGAGGTAATACTTCCAGTTGTGTACCTTCAAAATTAAATCTTGAATGTATTATAGAAAATGGTACTTCTGTAAAAGGAAAGAATGAAGATGCTACGACTATAGAGAAACCAATTGTAGAAAACAAAAAGATTGAAGAACAAGTACAAGAATCATTTCCTTCCGATAGAAATTTTACACAAAGATATAAATTGTTTAAAGAATTAAAAGTTTCTTTAATAAAATTTGATGCTCTGAAAGACTCCAGTACTACATATTCAGCAACTGAAATCGAGAAAATGACAGAAAGATTTACGAATTCTTACGTGAATTTAAATTCCTCAGAACTTCAAAATAGTAACGAAAAATCTATAAATAATGCATCATTTACTTCAATCTTTTCAAAAGATTCTAATATTAACATTGAGAAATCTACAGATGCTACAAAACATGTTTCAAGCTCAAGTATTGATAGCACTAATAGCATTGCACAGAATACTATTAGTAATGCAAAACAGAAATTGATTGTTCCAACCCCTATTATCAAATCTACATTATTATATTCTTCACAAGAATCTACCAATAAAACTTCTGAATTATCAAATGTGGTAGAAAACGTTGATAATATAGACAAATCTACTGGTATGGATAATTCTATAAAATTGGTTATTGATGCAAGATCTCAAGAACAAGTGGGAGTTGATACATCTGGTATTACTAATTCCAAATTGCATCTTTCAAAGAAAAATGAAAAACATGAATCAGAGAAACATATATTTGCAGCTAAAACATGTGGGAAAACTATAAATGTTACAACTACTAAAATAGCTACAAAGAAAAGTGCTTCAACTTCTTATTCTTCCATAGTATCTCCTAAAAAACATAAAAGATATAGAGATGATCTTGGTTATAAATGTATTGTTTGTGATCTTTGTTTTGAAGTTTATTCTGATTTACAACAACACCTAATTATACATACACAAAATCAAAATAATAGTTTAGCAAATTCATTGAAAACTTCCAATATGTCACCTGAAAAATCTCAGAACATGATATCTCAATACTCAAAAGCAAAGATATCAAAACAATCACAAGTGTCAAGTGAGCACAAGAGTGGAGAACATACAGCACCACAATATGTCACCAAGAAATATAATAGACGACAAAAGAAAAAAGATGCTATAACAAAAAGCTCACCGAGTAAAGAAAAGAGGAAAAGGAAGATGAAGCGTATTAGTAATTCAAATAAGTGTAGTATTTGTTCAAAACCTTTCGAAACAATAGCTGATTTGGCAGCTCATATCTTCTTACATTCAGAGAGAGAATTGCAACAAGCATATAAACTCGCAATACAAAAAATGAATGGAACAGAAATATATAAACAAATTAGAACCGAACAAACAGCTAACAGTATTAAAAATGTAAATAGCACTGTAAATACTGCAGATAATATAATTGAAAGGAGTCAGAAAGTTAATGATAAGGAAGAAACGTTGCTTATACAGAAACCAAATAAATCATTAATTACAGAAGATTCAGAAATTAGAGACACAGAATCTATTACTATGAAAGAAAACTATTCGCAAGATATAGAATTATGTTTGCCAGCAAAATCGAAAAAAGATGGTAATAAAAAATCGTTCACAGTATGCGAATGTCATAATAAACCAGGAACTAATGAAAATTGTTTGCAAATCGAAATAGTTCTTCTTTGTCACACTTGCAGGGTGCTATTTAGAAGTATGATATGTTTCGAAACCCATTATCGTCTTCCCGAATATACAAAATGTAATAAAAACCGCTTAGCTAGTGGTCGTTCTCCAAATTTATTTTGTGCTACCTGTGGTATGATATTTAGTTCAGTTCAAGATGTGCGTCATCATTTAGAAATGCATGCTCGTTTTGAAAAAGACTGTACAATGGATTTTCGATGCAACATTTGCAAGGTTATATTCCTGGGAATAGGAAGCCTTTTTTATATCCATTGGTCAAAGCATTCCAGAGATTCTTTTTGGATGGCTAGTGAGAAATCGTTTCCAAAAGATTCCGTAATAAACTCAAAGCTGAGAAAGGCAGAGAATTCTTCTACACAAAATGCAATGACTTTGAGTACGTGTGTAGAAGAATACATTGAAGTAGCAGAACATGTCTGTTATAAGTGTAAACTGCCTTTTATTGCTCAAGATGATTTAAAGAATCATATTTCAGAATGTAGAAAATTTAAGTCAGTTCAAGATGCATCTACTGCAGAAAACTCTAATACATATCTCGCAATAAGGATAACTTGTAGTTTATGCGATGATGCTTTTATTCACAAAAAAACAGAATTTTATAAACATATGAAAGATAAACATAATTTGAATACCGAACCTCGATTTATTTGTACATCATTCAGGGTTGGAAGTATGGTATTTATTTGCAGTGTCTGCATGGCAATGACTAAAAGTTTAGATGACTTTGAGGATCATTGGTTGAATCATAATACAACTCATGTATATTTTACTTGTTCACATTGTAATAAAATATATCACAACAGCTTAAATTCCTTCATAGACCATGCTAAAGGACATGGTATTGATGCTACTGTAGTGTCCTGTGTAGTAAAATATAAACAAACAAAATTCAGTTGTAAATTTTGTAATATTGGTTTTGATACTCCTCGAAGTATGCGGGAGCATGATATTATTCATAACACAAATAGCCAACAGATAAGTCCTAAGATTAGTCAAGTTACAAATCAAGACAGCTCTGCAACAGTATCAGAGACAGATCGTGCTTCCAATATTGCAAAGCTGGTTGAATTGACTGTTGAAAAGCAGATGGATGGATCATTACATAAGGAGACTCAAACAATGGAAAAGGCAAGCGAAATTTGTCCAATAGAATTTAGTATAGACAAAAGTAGGGATGAATTAATCAAGATATTAGAAGGAAATGAAGATGATTCTGAACATGAATTAATAATAGACTTGACAAAACAATCAGAAGAATGTAATGAAGGATTAAAAGAAGAAGGAAGCAAGGAAAGACAGACTACATCTAACCTTACATTAGATAAATCTTCTATCAATCAAACTTGTGTTATGTCGGAGAATAATAAAGCTAATGCATTGGTAACAAATGTAAATGTCCAAGTATCTTCACAAAATGTTGCAAAATCTAAAACTCAAAATGTTACAGATTCTCTTTTTACTGCTAAAAACATAAATCCTCAAATATCTAATTCAAACATTAAGTCTACAAATATTTCGCAAACAATATTGGTTTCAAATAATGTTAGTAATCATAATAATCTACTAGATATAGAAAAAAAAACAAGTGATCAATCAATCACAAAAGATATAGAAAGTACACAAAATGTTGAAGTTCATGACAGAATTTCAGTTATAAATCAAGAAGAATCAACAATTTTAACAAAAGAAACATCAGAGAAACAAAGTCCACCAAGACCAAGACAAGGGTTCTTAAGAGTGAAGACTCTTGCAGAGCTTACAGGTTCTACAAATTTATGTGAACTTAGCAATCGTGCTGTTGAAAATGCTAATGAATTAGCTAAGCACTTCAAAAGTCACCATGCTTCGAACAAAGATAATAATGAACACAAAACTACAGAAAAAGAATTAGCTTCAAAACAACCTGAAATAAACAAATTTATTGCCAATAAAAAATTAAAAATTGTTCCTAATACAAATCCAAATACATTACTATTATCTTCATCTAATTCAAACAATATAAAATTAGTGATTCAGAATCCAGTTATGAAATCTAATATTGCGGTAATAAATAATCAACAACCACAGCAATTCCAAATAAATACAAATCAAAACGAACACTCATCTTCTCTGGAAAATGTAACATCAGCATATCATAAAAACTTACCAGCTTGCAATTTCGTTCGAACAACCACTGCTATGCCACGTCTTACTCTTTTGAAACCTACCAAAGTAATAGCACATACTGCTAATATACGGAATGTACAGAGAATAAATGTAGCATCCTGTTCTACCAATGAAAATAAACAAAAGCCTTCTTCTGCAAAAAAGAATTCAAGTCATACTATACATAAGTGTAATCATTGCAATTTTGTTTCAAGTAATTCTGCAGAATTCTTAATGCACAATTTACCAGGTAATCGTACAACTTGTAAGAAGCAATATTCGAAAAATGATACCGAGGCGCAAGAACTTAACGAATTTGATAATTCACAAACAATACCCACAATTAATACTATTCAAAACAATCCAAATCCCAAACGATGTCAACAAACTATTATGAAGCAACCAGGGATTAACTATGCGTCTTCATCTGTCTGTGATCAATATTCTTATCTTGCTGCAGACACTTCGAATAATAGTAATCAAATGCTTAAACAAAATCAACCAATAATAACTAATCATCCAATAACAGGAAATACCACCCCTATTTATTATAAAAATCCAAATCCTAGCAGTGGTGGAATGTCAATAGTGATCAATCAAACTACACCTACTGTTCAGAATATACCCACAATAGAAATCCTGCAACAACCAGCGCGGCAACAAATATATCAACAACAGGATTTAGTTCAATTTTCCGAATCGAATGCTGTTTTCCAACTGGCTAATCAACCAAGTGTTACAACTTATCAAATTAGATATGTATGTCCCTATTGTTCGAAAAGTTTTTTTTCTGAAGACTATATGCAAATACATATAAATGAGCACCACAATTTTATATGTAATATTTGTAATGTGCGTTTATACAGTTTTAACGATTTAAATCTTCATAAAATTCAGCATACTTTGTTGTAA
Protein Sequence
MKISNEELFSSHHLIDNYSEQVINMSLPLPKPKPKGSNGKYNKIQDTSYIFRERSRSNRLKQLLRRGDTLEHLCKLLCKPVIVNVTKLSVSEIKQWCKKDLHQSQAENILTQKKKFKRRIQQRRFYKRKKKSKQEQLSCFLCNSKNEVTPQKMLFSKKAKIKNENFIKNLLEDVKQPHIKLQRIDEVINKIAQSFSRVPPIKECETSIQTEETQTELSIFASEQLKLSFVNIDTDKYQQNLDTETIAIRSCANETLQLNKYADSDSDSDSDFNTNSDSKSNSDFDSNTGNSRNTNERKHRIIYNSYTNDNNHYNKSHANNARIISNKLKRLRSNSSNKISKINQVNEKCNIIKKRCTSKNSLFQAPQRPSILDRISALCDPDDDDDDDESTKGGNTSSCVPSKLNLECIIENGTSVKGKNEDATTIEKPIVENKKIEEQVQESFPSDRNFTQRYKLFKELKVSLIKFDALKDSSTTYSATEIEKMTERFTNSYVNLNSSELQNSNEKSINNASFTSIFSKDSNINIEKSTDATKHVSSSSIDSTNSIAQNTISNAKQKLIVPTPIIKSTLLYSSQESTNKTSELSNVVENVDNIDKSTGMDNSIKLVIDARSQEQVGVDTSGITNSKLHLSKKNEKHESEKHIFAAKTCGKTINVTTTKIATKKSASTSYSSIVSPKKHKRYRDDLGYKCIVCDLCFEVYSDLQQHLIIHTQNQNNSLANSLKTSNMSPEKSQNMISQYSKAKISKQSQVSSEHKSGEHTAPQYVTKKYNRRQKKKDAITKSSPSKEKRKRKMKRISNSNKCSICSKPFETIADLAAHIFLHSERELQQAYKLAIQKMNGTEIYKQIRTEQTANSIKNVNSTVNTADNIIERSQKVNDKEETLLIQKPNKSLITEDSEIRDTESITMKENYSQDIELCLPAKSKKDGNKKSFTVCECHNKPGTNENCLQIEIVLLCHTCRVLFRSMICFETHYRLPEYTKCNKNRLASGRSPNLFCATCGMIFSSVQDVRHHLEMHARFEKDCTMDFRCNICKVIFLGIGSLFYIHWSKHSRDSFWMASEKSFPKDSVINSKLRKAENSSTQNAMTLSTCVEEYIEVAEHVCYKCKLPFIAQDDLKNHISECRKFKSVQDASTAENSNTYLAIRITCSLCDDAFIHKKTEFYKHMKDKHNLNTEPRFICTSFRVGSMVFICSVCMAMTKSLDDFEDHWLNHNTTHVYFTCSHCNKIYHNSLNSFIDHAKGHGIDATVVSCVVKYKQTKFSCKFCNIGFDTPRSMREHDIIHNTNSQQISPKISQVTNQDSSATVSETDRASNIAKLVELTVEKQMDGSLHKETQTMEKASEICPIEFSIDKSRDELIKILEGNEDDSEHELIIDLTKQSEECNEGLKEEGSKERQTTSNLTLDKSSINQTCVMSENNKANALVTNVNVQVSSQNVAKSKTQNVTDSLFTAKNINPQISNSNIKSTNISQTILVSNNVSNHNNLLDIEKKTSDQSITKDIESTQNVEVHDRISVINQEESTILTKETSEKQSPPRPRQGFLRVKTLAELTGSTNLCELSNRAVENANELAKHFKSHHASNKDNNEHKTTEKELASKQPEINKFIANKKLKIVPNTNPNTLLLSSSNSNNIKLVIQNPVMKSNIAVINNQQPQQFQINTNQNEHSSSLENVTSAYHKNLPACNFVRTTTAMPRLTLLKPTKVIAHTANIRNVQRINVASCSTNENKQKPSSAKKNSSHTIHKCNHCNFVSSNSAEFLMHNLPGNRTTCKKQYSKNDTEAQELNEFDNSQTIPTINTIQNNPNPKRCQQTIMKQPGINYASSSVCDQYSYLAADTSNNSNQMLKQNQPIITNHPITGNTTPIYYKNPNPSSGGMSIVINQTTPTVQNIPTIEILQQPARQQIYQQQDLVQFSESNAVFQLANQPSVTTYQIRYVCPYCSKSFFSEDYMQIHINEHHNFICNICNVRLYSFNDLNLHKIQHTLL