Basic Information

Insect: Bombus consobrinus
Gene Symbol: -
Assembly: GCA_014737455.1
Location: JACXIU010000003.1:1228462-1239542[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00046 0.037 14.4 1.0 1 23 759 781 759 781 0.97

2 9 0.0019 0.15 12.4 0.1 2 23 872 893 871 893 0.96

3 9 0.042 3.4 8.2 0.3 3 23 1064 1084 1062 1084 0.95

4 9 9.6 7.7e+02 0.8 0.4 1 10 1095 1104 1095 1104 0.89

5 9 0.0067 0.54 10.7 0.6 1 21 1168 1188 1168 1189 0.94

6 9 0.19 16 6.1 0.2 1 23 1257 1279 1257 1279 0.97

7 9 0.02 1.6 9.2 0.3 1 23 1328 1350 1328 1350 0.96

8 9 0.00017 0.013 15.8 0.4 1 23 1988 2011 1988 2011 0.97

9 9 0.15 12 6.5 0.4 1 23 2013 2035 2013 2035 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00046	0.037	14.4	1.0	1	23	759	781	759	781	0.97
2	9	0.0019	0.15	12.4	0.1	2	23	872	893	871	893	0.96
3	9	0.042	3.4	8.2	0.3	3	23	1064	1084	1062	1084	0.95
4	9	9.6	7.7e+02	0.8	0.4	1	10	1095	1104	1095	1104	0.89
5	9	0.0067	0.54	10.7	0.6	1	21	1168	1188	1168	1189	0.94
6	9	0.19	16	6.1	0.2	1	23	1257	1279	1257	1279	0.97
7	9	0.02	1.6	9.2	0.3	1	23	1328	1350	1328	1350	0.96
8	9	0.00017	0.013	15.8	0.4	1	23	1988	2011	1988	2011	0.97
9	9	0.15	12	6.5	0.4	1	23	2013	2035	2013	2035	0.95

Sequence Information

Coding Sequence: ATGGAAATTTCTATTGAAGAATTATTTCCTGCACATTATGCGGTTAAGAATTACTCAGAGCAAGTAATTAACATGTTATTACCATTACCAAAGCCAAAACCTAAAGATTCTAATGCAAGATACGAAAAAATCCAAGATACTAGTTGTTATATATTCAGGAAAAGACCAAAAAGTAATAGGTTAGAAGAATTGTTAAGAAGAGGAGATACACTAGAGGATTTGTGTAAATTATTGTGTAAGCCAGTTATTGTGAACGTTACAAAATTATCAATATCAGAGATAAAACAATGGTGTAAAAAAGACTTGTATCAATCTAAAGCAGAAAATATATTAACACAGAAAAAAAAATTTAAACCAAGGATACCACGAACAAAATTCTGTAAAAAAAAGAAAAAGTCCAAGCAGGAGCAGTTATCTTGCTTATATCATTCTGAAAATGAAAATAAACCTCAAAATATGTTATTTTCCAAGAAAGCGGAGATTGAAAACAAGAATTGTATAAAAAATTTATTAGAAGATATTAAACAACCACAGATAAAATTACAAAGAATAGATGAAGTAATTAATAAAATAGCACAGTCATTTGCAAGAGTAACTCCGATTAAAGAATGCGAAACAAGATGTGAGACAAGCATTCAAACAGAAGAAACTCAAACTGAATTAAGTATATCTGCACCAAAACAACTAAAATTATCATCTGTAAATATCGATAGAGATAAATATCAACAAAATCTTAAAACTGAGACAATAGCAATTAGGTCTCATGCAAATGAGACTCTACAATTGAATAAATGTGCAGATTCAGATTCAGATTCAGATTCAGATTTTAATACTAATTCTGATTTTGATTCTAATACTGGAAATTCTAGAAATACTAATGAAAGGAGACATAGAATTATATACAATTCTCATACAGATAATAATAATCGTTACAATAAAAGCAATGCTAATAATGAAAGAATAATTTCGAATAAATTAAAGAGGTTAAGGGAAAATTCATCAAAAAAAATAAGCAAAATTAACCTAGTAAATGAAAAATACAATATTATTAAGAAAAGATATACAGATAAAAATTCATTGTCTCAAGCACCACAAAGACCAAGTATATTAGACCGTATATCTGCGCTATGTGATCCTGATGATGATGATGATGATGAAAGTACTAAAGAAGGTAATACTTCCAGTTGTGTGCCATCAAAATTAAATCTTGATTGTATTATAGAAGATGGTACTTCTGTAAAAGGAAAGAATGAAGATGCTATGACTATAGAGAAACCAATTGTAGAGAACAAAAAGATCGAAGAACAAATACAAGAATCATTTCCTTCCGATAGAAATTTTACACAAAGATATAAATTGTTTAAAGAATTAAAAGTTCTTTTAATAAAATTTGATGCTCTGAAAGACTCCAATACTACATATTCAGCAACTGAAGTTGAAAAAATGACAGAAAGATTTATGAATTCTTACGTGAATTCAAATTCTTCAAAACTTCAAAATATTAATAAAAAATCTACAAATAATGCATCATTTATTTCAATTATTTCAAAAGATTCTAATGTTAACATTGAGAAATCTACAGAAGCTACAAAACATGATTCAAGATCAAGTATTGATAGCATTCCAAATAAAGATGTTTATACAACTACCGAAGGAACACAAAGCACAATTAAATTACCAAAATTTTCAGAAAAATTATTTCCAAATTTAATCAGAAATGCAAAGATACAACAAGAGAGAAGTTCACAATTTCAAAAAGCTTGTCATAACTTAACAAAAATTTTTGAAGACAGTTATAGAAAAAGGTTTGCACAGAATACTATTAATAATGCAAAGAAGAAATTGATTGTTCCTACCCCTACTACCCAATCTACATTATTATGTTCTTCACAAAAATCTACCAATAAAACTTCTGAATTATCAAATGTGGTAGAAAACATTAATAATATAGACAAATCTACTGGTAAAACGTTCTCCTTAAAGAAAAAGATACCAAAGATTTCTTCACCTAAGGAGAATTCTATGAAATTGGTTATTGATGCAAGATCTCAAGAACAAGTGGCAGTTGATACATCTAAGGTTACTAATTTCAAATTGCATCTTTCAAAGAAAAATAAAAAACATGAGTCAGAGAAACATACATCTGCACCTAAAACATGTGGGAAAACTACAAATGTTACAACTACTAAAATAGCTACAAAGAAAAGTGCTTCAACTTCTTATTCTTCCATAGTATCTCCTAAAAAACATAAGAGACTTAGAGATAATCATGGTTATAAATGTATTGTTTGTGACCTTTGTTTTGAAGATTATTCTGATTTACAACAACACCTAATTACACATACACAAAAGCAAAATAATAGTTTAGCAAATTCATTGAAAACTTCCAATATGTCACCTGAAAAATCTCAGGACATGATATCTCAATCCTCAGAAACAGAGATATCAGAACCATCACAAGTGCCAAGTGAGCACAAGAGTGAAGAACATACAGCATCACAATATGTCACCAAGAAAGAAAATGGGCAACAAAAGAAAAAAGATGCTATAACAAAGAGCTTTCTGAGTAAAGAAAAGAGGAAAAAGAGAATTAAGCGTATTAATAATTCAAATAAGTGTAGTATTTGTTCAAAACCTTTTGAATCAATGGCTGATTTGGCAGCTCATATCTTCTTACATACAGAGAAAGAATTGCAACAAGCGTACAAACTCGCAAAACAAAAATTGAATAAAACAGAAAAATATAAACAAACTAGAACTGAACGAAAAGCTAACAGTATTAAAAATATAAATAGCACTGTAAATATTGCAGATAATAAAATTGAAAGGACTCAGAAAGTTAATGATAAGGAAGAAACGTTGCTTATAAAGAAACCATTAATTACAGAAGATCCAGAAATTAGAGACACAGAATCTATTACTATGAAAGAAAACTATTTGCAAGATATAGAATTATGTCTACCAGCAAAATCGAAAAAAGATGGTAATAAAAAATCATTCACAGTATGTGAATGTCATAATAAACCAGGAACTAATGAAAATTGTTTGCAAATCGAAATAGTTCTTCTTTGTCACACTTGCAGGGTGCTATTTAGAAGTATGAAATGTTTCGAAACCCATTATCGTCTTCCCCAATATGTAAAATGTAATCAAAACCGCTTAACTAGTGGTCGTTCTCCAAATTTATTTTGCGCTACCTGTGGTATGATATTTAGTTCAGTTCAAGATGTGCGTCATCATTTAGAAATACATGCTCGTTTTAAAAAAGACTATACAATGGATTTTCGATGCAACATTTGCAAGATTATATTTCTGGGAATAGGAAGCCTTTTTTATATCCATTGGTCAAAGCATTCCAGAAATTCGTTTTGGATGGCTAGTGAGAAATCGTTTCCAAAAGATTCCATACTAAATTTGAAGCTGACAAAGGCAGAGAATTCTTCTACAGAAAATGAAATGACTTTGAGCACGTGTGTAGAAAAATACATTGAAGTAGCAGAACATGTCTGTTGTAATTGTAAACTGCCTTTTATTACTCAAGATGGTTTAAGGAATCATATTTTAGAATGTACAAAATTTAAGTCAGTTCAAGATGCATCTATTGCAGAAAACTCTAATACATGTCTCGCAATAAGGATAACTTGTAATTTATGCGATGATACTTTTATTAACAAAAAAACAGAATTTTATAAACATCTGAAAGATAAACATAATTTGAGTACCGAACCTCGATTTATTTGTACATCATTCACGGCTAGAAATATAGTATTTATTTGCAGTGTCTGCACGGCAATGACTAAAAGTTTAAATGACTTTGAGGATCATTGGCTGAAACATAATACAACTCATGTATATTTTACTTGTTTGCATTGTACTAAAATATATCACAACAGCTTACATTCCTTCATAGACCATGCTAAAAGACATACTATTGATGCTAATGATGTAGTGTCCTGTGTAGTAAGTTATGAACAAACAAAATTCAGCTGTAAATTTTGTAATATTGGTTTTGATTCTTCTCAAAGTATGCAGGATCATGCTATTATTCACGACACAAACAGCCAACAGATAAGTCCTAAGATTAGTCAAGTTACAAATCAAGACAGCTCTGCAAAAGTATCAGAGACAGATTGTGCTTCCAATTTTGCAAAGTTTGTCGAATTGACTATTGAAAAGGGGATAGAAGAATTAAAAATGGAGACTCAAACAATGGAAAATGCAAACGAAATTTGTCCAATAGAATCTAGTATAGACAAAAGTAGGGAAAGATTAATCAGGATATTAGAAGGAAATGAAGATGATTCTGAACATGAATTAGTAATAGACTTGACAAAACAATCAGAAGAATGTAATGAAGAATTAAAAGAAGAAGGAAGTAAGGAAAGACAGACTACATCTAATTTTACATTGGATAAATCTTCTATCAATCAAACTTGTGTCACGTCTGAGAATAATAAAGCTAATGAATTGGTAACAAATGTAAATATCCAAGTATCTTCACAAAATGTTGCAAAATCTAAAACTCAAAATGTTACAGATTCTCTTTTTACTGCTAAAAACATAAATCCTCAAATATCTAATTCTATAATTAAATCTACAAATATTTTGCAACCAAATAATGTTAGTAATCATAATAATCTACTAGGTATAGAAAAAAAAACAACAAGTGACCAATCAATCACAAAAGATATAGAAAGTACACAAAATGTTGAAGTTCATGACAGAATTTCAATTATAAATCAAGAAGAATCAACAATTTTAACAAAAGAAACATCAGAGAAACTACCAAGTCCACCAAAACCAAGACAAGGGTTCTTAAGAGTGAAGACTCTTGCAGAGCTTACAGGTTCTGCAAATTTACGTGAACTTAGCAATTGTACTGTTGAAAATGCTAATGAATTAGCCAAGCACTTCAAAAGTCACCATGCTTCGAACAAAGATAATAATGAACACAAAACTACAGAAAAAGAATTAGTTTCAAAACAACCTGCAATAAACAAATTTATTGCTAATAAAAAATTAACAATTGTTCCTAAAACAAATTCAAATACATTACTATTATCTTCATCTAATTCAGGCAATATAAAATTAGTGATTCAGAATCCAGTTATGAAATCTAATACTACAGTAATAAATAATCAACAACCACAGCAATTCCAAATAAATACAAATCAAAACGAACACTCATCTTCTCTGGAAAATGTAACATCAGCATATCATAAAAACTTACCAGCTTGCAATTTTGTTCGAACAACCACAGCTATGCCACGTTTTACTATTTTGAAACCTATCAAAGTAGTAGCACATACTGCTAATATACCGAATGTACAGAGAACACATGTAGCATCCTGTTCTACCAATGAAAATAAACAAAAGTCTTCTTCTGCAAAAAAGAATTCGGGTCATACTGTACATGAGTGTAATTCTGCAGAATTCTTAATGGACAATTTATCAGGTAATCATTCAACTTGTGAGAAGCAATATTTGCAAAATGACACCCAGGCACAAGAACTTAAGAAATTTGGTAATTCACAAACAATACCTACAATTAATACTATTCAAAACAATCCAAATCCCAAACAATGTCAACAAACTACTATGAAGCAACCAGGAATTAACTATGAGTCTTCATCTATCTGTGATCAATATTCTTATGTTGCTGCAGGCACTTCGAATAATAGTAATCAAATACTTGAACAAAATCAACCAATAATAACTAATCATCCAATAACAGAAAATACCACCCCTATTTATTATAAAAATCCAAATCCTAGCAATGGTGGAATGTCAATAGTGATCAATCAAACTACACCTACTGTTCAGAATATACCCACAATAGGAATCCTGCAACAACCAGCGCAGCAACAAATAAATCAACAACAGGATTTAGTTCAATTTTCCGAATCGAATACTGTTTTCCAACTGGCAAATCAACCAAGTGTTGCAACTTATCAAGTTAGATACGTATGTCCTTATTGTTCGGAAAGTTTTGTTTCTGAAAACTATATGCAGATGCATATAAATAAGCAACACAATTTTATATGTGATATTTGTAGTTTGCGTTTATACAGTTTTAGCGATTTAAATCTTCATAAAATTCAGCATAGTTTGTTGTAA
Protein Sequence: MEISIEELFPAHYAVKNYSEQVINMLLPLPKPKPKDSNARYEKIQDTSCYIFRKRPKSNRLEELLRRGDTLEDLCKLLCKPVIVNVTKLSISEIKQWCKKDLYQSKAENILTQKKKFKPRIPRTKFCKKKKKSKQEQLSCLYHSENENKPQNMLFSKKAEIENKNCIKNLLEDIKQPQIKLQRIDEVINKIAQSFARVTPIKECETRCETSIQTEETQTELSISAPKQLKLSSVNIDRDKYQQNLKTETIAIRSHANETLQLNKCADSDSDSDSDFNTNSDFDSNTGNSRNTNERRHRIIYNSHTDNNNRYNKSNANNERIISNKLKRLRENSSKKISKINLVNEKYNIIKKRYTDKNSLSQAPQRPSILDRISALCDPDDDDDDESTKEGNTSSCVPSKLNLDCIIEDGTSVKGKNEDAMTIEKPIVENKKIEEQIQESFPSDRNFTQRYKLFKELKVLLIKFDALKDSNTTYSATEVEKMTERFMNSYVNSNSSKLQNINKKSTNNASFISIISKDSNVNIEKSTEATKHDSRSSIDSIPNKDVYTTTEGTQSTIKLPKFSEKLFPNLIRNAKIQQERSSQFQKACHNLTKIFEDSYRKRFAQNTINNAKKKLIVPTPTTQSTLLCSSQKSTNKTSELSNVVENINNIDKSTGKTFSLKKKIPKISSPKENSMKLVIDARSQEQVAVDTSKVTNFKLHLSKKNKKHESEKHTSAPKTCGKTTNVTTTKIATKKSASTSYSSIVSPKKHKRLRDNHGYKCIVCDLCFEDYSDLQQHLITHTQKQNNSLANSLKTSNMSPEKSQDMISQSSETEISEPSQVPSEHKSEEHTASQYVTKKENGQQKKKDAITKSFLSKEKRKKRIKRINNSNKCSICSKPFESMADLAAHIFLHTEKELQQAYKLAKQKLNKTEKYKQTRTERKANSIKNINSTVNIADNKIERTQKVNDKEETLLIKKPLITEDPEIRDTESITMKENYLQDIELCLPAKSKKDGNKKSFTVCECHNKPGTNENCLQIEIVLLCHTCRVLFRSMKCFETHYRLPQYVKCNQNRLTSGRSPNLFCATCGMIFSSVQDVRHHLEIHARFKKDYTMDFRCNICKIIFLGIGSLFYIHWSKHSRNSFWMASEKSFPKDSILNLKLTKAENSSTENEMTLSTCVEKYIEVAEHVCCNCKLPFITQDGLRNHILECTKFKSVQDASIAENSNTCLAIRITCNLCDDTFINKKTEFYKHLKDKHNLSTEPRFICTSFTARNIVFICSVCTAMTKSLNDFEDHWLKHNTTHVYFTCLHCTKIYHNSLHSFIDHAKRHTIDANDVVSCVVSYEQTKFSCKFCNIGFDSSQSMQDHAIIHDTNSQQISPKISQVTNQDSSAKVSETDCASNFAKFVELTIEKGIEELKMETQTMENANEICPIESSIDKSRERLIRILEGNEDDSEHELVIDLTKQSEECNEELKEEGSKERQTTSNFTLDKSSINQTCVTSENNKANELVTNVNIQVSSQNVAKSKTQNVTDSLFTAKNINPQISNSIIKSTNILQPNNVSNHNNLLGIEKKTTSDQSITKDIESTQNVEVHDRISIINQEESTILTKETSEKLPSPPKPRQGFLRVKTLAELTGSANLRELSNCTVENANELAKHFKSHHASNKDNNEHKTTEKELVSKQPAINKFIANKKLTIVPKTNSNTLLLSSSNSGNIKLVIQNPVMKSNTTVINNQQPQQFQINTNQNEHSSSLENVTSAYHKNLPACNFVRTTTAMPRFTILKPIKVVAHTANIPNVQRTHVASCSTNENKQKSSSAKKNSGHTVHECNSAEFLMDNLSGNHSTCEKQYLQNDTQAQELKKFGNSQTIPTINTIQNNPNPKQCQQTTMKQPGINYESSSICDQYSYVAAGTSNNSNQILEQNQPIITNHPITENTTPIYYKNPNPSNGGMSIVINQTTPTVQNIPTIGILQQPAQQQINQQQDLVQFSESNTVFQLANQPSVATYQVRYVCPYCSESFVSENYMQMHINKQHNFICDICSLRLYSFSDLNLHKIQHSLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218063;
90% Identity: iTF_00220899;
80% Identity: -