Basic Information

Insect: Bombus opulentus
Gene Symbol: -
Assembly: GCA_034509555.1
Location: CM067419.1:7359540-7366156[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00058 0.046 14.3 1.0 1 23 793 815 793 815 0.97

2 12 0.036 2.8 8.7 0.0 2 23 906 927 905 927 0.95

3 12 6.9 5.5e+02 1.5 3.4 3 21 1061 1079 1060 1080 0.96

4 12 0.028 2.2 9.0 0.6 3 23 1101 1121 1099 1121 0.96

5 12 0.0032 0.25 12.0 0.2 1 20 1205 1224 1205 1226 0.94

6 12 8.4 6.6e+02 1.2 1.3 2 23 1251 1274 1250 1274 0.71

7 12 0.1 8 7.3 0.2 1 23 1294 1316 1294 1316 0.97

8 12 7.2 5.6e+02 1.5 3.0 1 13 1323 1335 1323 1346 0.73

9 12 0.0063 0.49 11.1 0.5 1 23 1365 1387 1365 1387 0.96

10 12 0.37 29 5.5 1.5 1 19 1841 1859 1841 1861 0.94

11 12 3.1e-05 0.0024 18.4 0.2 1 23 2032 2055 2032 2055 0.96

12 12 0.66 51 4.7 0.6 1 23 2057 2079 2057 2079 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00058	0.046	14.3	1.0	1	23	793	815	793	815	0.97
2	12	0.036	2.8	8.7	0.0	2	23	906	927	905	927	0.95
3	12	6.9	5.5e+02	1.5	3.4	3	21	1061	1079	1060	1080	0.96
4	12	0.028	2.2	9.0	0.6	3	23	1101	1121	1099	1121	0.96
5	12	0.0032	0.25	12.0	0.2	1	20	1205	1224	1205	1226	0.94
6	12	8.4	6.6e+02	1.2	1.3	2	23	1251	1274	1250	1274	0.71
7	12	0.1	8	7.3	0.2	1	23	1294	1316	1294	1316	0.97
8	12	7.2	5.6e+02	1.5	3.0	1	13	1323	1335	1323	1346	0.73
9	12	0.0063	0.49	11.1	0.5	1	23	1365	1387	1365	1387	0.96
10	12	0.37	29	5.5	1.5	1	19	1841	1859	1841	1861	0.94
11	12	3.1e-05	0.0024	18.4	0.2	1	23	2032	2055	2032	2055	0.96
12	12	0.66	51	4.7	0.6	1	23	2057	2079	2057	2079	0.95

Sequence Information

Coding Sequence: ATGGAAATTTCtgaagaagaattattttcttcacaTCATTCGGTTGATAATTACTCAGAGCAAGTAATTAACATGTCATTACCATTACCAAAGCCAAAACCTAAAGATTCTAatgcaaaatacaaaaaaatccAAGATACTagctattatatatttaagaaaaaatcaaCAAGTAATAGGTTGAAACAATTGTTAAAAAGAGGAGATACATTAGAGGATTTGTGTAAATTATTGTGTAAGCCAGTTATTGTgaatgttacaaaattatcaGTATCAGAGATAAAACAATGGTGTAAAAAAGACTTGCATCAATCTaaagcagaaaatatattaacacagaaaaaaaaatgtaaaccacgaataaaattctataaaagaaagaagaagtcCAAGCAGAAGCAATTATCTTCCatatgtaattttgaaaatgaagttaaacctcaaaatatgttattttccAAGAAAGCAGAGATTGAAAACAAgaattgtacaaaaaatttattagaagatGTTAAACAACcacatataaaattacaaagaatagATGAAGTAATCAATAAAATAGCACAGTCATTTGCAAGAGTAACTCCGATTAAAGAATGTGAAACAATTATTCaaacagaaacaaatattcaatCTGAATgcgaaacaaatattcaaacaagATGTGAAACAAGTGTTCAAACAAAATGTGACACAAGTATTCAAACAGAAGAAATTCAAACTGAATTAAGTATATCTGCACCAGAACAACTAAAATTATCATCTGTAAATATCGATACAGATAAATATCAACAAAATCTTAAAACTGAGACAATAGCAATTAGATCTCATGCAAATGAGACTCTACAATTGAATAAATGTGCAGATCCAGTCTCTGATTCATATTCTGATACTAATTCTGATTTTGAAACTAATTCTGATGCTGATTCTGATTCTGATTCTGATTCTGATACTGGAAATTCTAGAAATACTAATGAAAGGAGACAtagaattacatataattctCATGCAGCTGATAATAATCGTTACAATAAGAGCAATGCTAATAATGCaagaataatttcgaataaattaaaaatgttaacgagaaattcattaaaacaaACAAGACAAATTAACctagtaaatgaaaaatacaatattattaaagaaaggtgtacagataaaaattcattgtctCAAGCACCACAAAGACCAAGTATATTAGACCGTATATCTGCGCTATGTGATcctgatgatgatgatgatgatgaaagCATTAAAGAAGGTAATACTTCCAGTTGTGTGCcttcaaaattaaatcttgAATGTATGATAGAAGATGGTACTTctgtaaaaggaaagaatgaaGATGCTATGACTATAGAGAAATCAATtgtagaaaacaaaaagattgaAGAACAAATACAAGAATCATTTCCTTccaatagaaattttacacaaagatataaattatttaaagaattaaaagtttttttaataaaatttgatgctCTGAAAGACTCCAATACTACATATTCAGCAactgaaattgagaaaatgaCAGAAAGATTTACGAATTCTTACgtgaatttaaattcttcaaaacTTCAAAATAGTAAcgaaaaatctataaataatgcatcatttatttcaatcttttcaaAAGATTCTAATGTTAACATTGAGAAGTCTACAGATGCTACAAAACATGTTTCAAGCTCAAGTATTGATAGCATTccaaataaagatatttatacaactaCCAAAAGAACACAaagtacaattaaattattatcaaattcttcagaaaaattatttccaaatttaaccAGAAATGCAAAGATACAACAAGAGAGAAGTTCACAAATTCAAAAAGTTTGtcataatttaacaaaaatttttgaaGACAGTTCTAAAAAAAGGTTTGCACAGAATACTATTAGTAATGCAAAGCAGAAATTGATTGTTCCAACCCCTACTATCAAAtctacattattatattcttcacAAAAACCtaccaataaaaattttgaaatatcgaatgtgGTAGAAAACATTGATAATATAGACAAATCTACTGGTAAAACGTTCTCCttaaagagaaagatatcAGAGATTTCTTCGCCTATGGAGAATTCTATGAAATTGGTTATTGATGCAAGATCTCAAGAACAAGCGGGAGTTGATACATCTGGTGTTACTAATTTCAAATTGCatctttcaaagaaaaataaaaaatatgaatcagAGAAACATATATTTGCACCTAAAACATGTAGAAAAACTACAAATGATACAACTACTAAAATAGCTACAAAGAAAAGTGCTTCAACTTCTTATTCTTCCATAGTATCTCCTAAAAAACATAAGAGACTTAGAGATAATCATGGTTATAAATGTATTGTATGTGATCTTTGTTTTGAAGATTATTCTGATTTACAACAACACCTAATTACACATACACAAAAGCAAAATAATAGTTTAGgaaattcattgaaaactTCCAACATGTCACCTGAAAAATCTCAGGACATGATATCTCAATCCTCAAAAGCAAATATATCAGAACCATCAAAAGTATCAAGTGAGCACAAGAGTGGAGGACATACAGCATCACAATATGTCACCAAGAAAGATAATGgacaacaaaagaaaaaagatgctATAACAAAAAGCTCattgaataaagaaaagaataaaaagaggatTAAGCGTATTAGTAATTCAAATAAGTGTAGTATTTGTTCAAAACCTTTTGAAGCAATGGCTGATTTGGCAGCTCATATCTTCTTACATACAGAGAAAGAATTGCAAGAAGCATATATACAcgcaaaacaaaaattgaatggaACAAAAAAGTATAAACAAACTAGAATTGAACAAACAGCTAAcagtattaaaaatgtaaatagcaCTGTAAATACTGcagataatataattgaaaggACTCAGAAAGTTAATGATAAGGAAGAAACGTTGCTTATACGGAAAccaaataaatcattaattacaGAAGATTCAGAAATTAGAGACACAGAATCTATTATTATGAAAGAAAACTATTCGCAAGATATAGAATTATGTCTGCCAACAAAATCGAAAAAAGGTGGTAATAAATACTTGTTCACAGTATGCGAATGTCATAATAAACCAGGAActaatgaaaattgtttgcaaATCGAAATAGTTCTTCTTTGTCACACTTGCAGGGTGATATTTAGAAGTATGAAATGTTTCGAAACCCATTATCGTCTTCCccaatatgtaaaatgtaatcaAAACCACTTAATTAGTGGTCGTTctccaaatttattttgcgCTACCTGTGGTATGATATTTAGTTCAGTTAAAGATGTGCGCCATCACTTAGAAATGCATGCTCGTTTTAAAAAAGACTGTACAATGGATTTTCGATGTAACATTTGCAAGGTTATATTTCTGGGAATAGGAAGCCTTTTTTATATCCATTGGTCAAAGCATTCCAGAGATTCTTTTTGGATGGCTAGTGAAAAATCGTTTCCAAAAGATTCCATAATAAACTTGAAGCTGAGAAAGGCAGAGAATTCTTCTACACAAAATGCAATGACTTTGAATACGTGTgtagaaaaatacattgaaGTAGCAGAACATGTCTGTTATAATTGTAAACTGCCTTTTATTAGTCAAGATGATTTAAAGAATCATATTTCagaatgtagaaaatttaaggCAGTTCAAAATGCATCTATTGTAGAAAACTCTAATACATATCTCGCAATAAGgataacttgtaatttatgcgatgatacttttattaacaaaaaaacagaattttataaacatatgaaAGATAAACATAATTTGAGTACCGAACCTCGATTTATTTGTACATCATTGACGGCTGAAAATATGGTATTTATTTGCAGTGTCTGCACGGCAATGACTAAAAGTTTAGATGACTTTGAGGATCATTGGTTGAAACATAATACAACTcatgtatattttacttgTTCGCattgtagtaaaatatatcacaataGCTTAAATTCCTTTATAAACCATGCTAAAAAACACGGTATTGATACTAATGATGTAGTGTCCTGTGTAGTAAGttataaacaaacaaaattcagttgtaaattttgtaacattgGTTTTGattctcgtaaaaatatgCAGGAGCATGCTATTATTCATGACACAAACAGCCAACAGATAATTCCTAAGATTAGTCAAGTTACAAATCAAGACAGCTCTGCAACAGTATCAGAAACAGATTGTGCTTCCAATTTTGCAAAGCTGGTTGAATTGACTATTGAAAAGCAGATAGATGAATCATTACAAATGGAGACTCAAAAAATGGATAAGGCAAGCGAAATTTGTCCAATAGAATCTAATATAGACAAAAGTAGGGACAAATTAATCAAGATATTAGAAGGAAATGAAGATGATTCTGAAcatgaattaataatagacTTGACAAAACAATCAGAAGAATGTAATGAAGtattaaaagaagaaggaagtaAGGAAAGACAGACTACATCTAATCTTACATTAGATAAATCTTCTATCAATCAAACTTGTGTCATGTCGGAGAATAATAAAGCTAATGCATTGGTAACGAATGTAAATATCCAAGTATCTTCACAAAATGTTGCAAAATCTAAAACTCAAAATGTTACAGATTCTCTTTTAACTGCTAAAAACATAAATCCTCAAATATCTAATACAAACATTAAGCctacaaatattttgcaaacaaATAATGTTAGTAATCATAATAATCTACtagatatagaaaaaaaaacaagtgACCAATCAATCACAAAAGATATAGAAAGTACACAAAATGTTGAAGTTCATGacagaatttcaattataaatcaagaagaatcaacaattttaacaaaagaaaCATCAGAGAAACAAAGTCCACCAAGACCAAGACAAGGGTTCTTAAGAGTGAAGACTCTTGCAGAACTTACAGGTTCTGCAAATTTATGTGAACTTAGCAATTCTGCTGTTGAAAATGCTAATGAATTAGCCAAGCACTCCAAAAGTCACCATGCTTCGAACAAAGATAATAATGAACACAAAActacagagaaagaaatagtTTCAAAACAAtctgaaataaacaaatttattgctaataaaaaattaacaattgttcctaatacaaatttaaatacattactATTATCTTCATCTAATTCAggcaatataaaattagtgTTTCAGAATCCAGTTATGAAATCTAAtactacaataaaaaataaccaACAACCGCAACAATtccaaataaatacaaatcaaAAGGAACACTCATCTTCTCTGGAAAATGTAACATCAGCATATCATAAAAACTTACCAGCTTGCAATTTCGTTCGAACAGCCACAGCTATGCCACGTTTTACTATTTTGAAACCTACCAAAGTAAAAGCACATTCTGCTAATATACCGAATGTACAGAGAACACATGTAGCATCCTGTTCTACCAATGAAAATAGACAAAAGTCTTCttctgaaaaaaataattcaagtcATACTGTACATAAATGTAATCATTGCAATTTTGCTTCAAGTAATTCTGCAGAATTCTTAATGCACAATTTACCAGGTAATCGTTCAACTTGTAAGAAGcaatatttgcaaaatgaCACCCAGGAGCAAACACTTAACAAATTTGATAATTCACAAACAATACCCACAATTGATACTATTCAAAACAATCCAAATCCTAAACAACGTCAACAAACTACTATGGAGCAACCAGGAATTAACTATGCGTCTTCATCTGTCTGTGATCAGTATTCTTATCTTGCTGCAGGCACTTCGAATAATAGTAATCAAATACTTAAACAAAATCAACCAATAATAACTAATCATCCAATAACAGAAAATACCACCcctatttattataaaaatccaAATCCTAGCAGCGGTGGAATGTCAATAGTGATCAATCAAACTACACCTACTGTTCAGAGTATGCCCGCAATAGGAATCCTGCAACAACCAGCGCAGCAACAAATATATCAACAACAGgaTTTAGTTCAATTTTCCGAATCGAATGCTATTTTCCAACTGGCTAATCAACCAAGTGTTAGAACTTATCAAGTTAGATATGTATGTCCttattgttcgaaaagttttgTTTCTGAAGACTATATGCAGATACATATAAATGAGCAAcacaattttatatgtaatatttgtagTTTGCGTTTATACAGTTTTAACGATTTAAATCTTCATAAAATTCAGCATAATTTGTTGTAA
Protein Sequence: MEISEEELFSSHHSVDNYSEQVINMSLPLPKPKPKDSNAKYKKIQDTSYYIFKKKSTSNRLKQLLKRGDTLEDLCKLLCKPVIVNVTKLSVSEIKQWCKKDLHQSKAENILTQKKKCKPRIKFYKRKKKSKQKQLSSICNFENEVKPQNMLFSKKAEIENKNCTKNLLEDVKQPHIKLQRIDEVINKIAQSFARVTPIKECETIIQTETNIQSECETNIQTRCETSVQTKCDTSIQTEEIQTELSISAPEQLKLSSVNIDTDKYQQNLKTETIAIRSHANETLQLNKCADPVSDSYSDTNSDFETNSDADSDSDSDSDTGNSRNTNERRHRITYNSHAADNNRYNKSNANNARIISNKLKMLTRNSLKQTRQINLVNEKYNIIKERCTDKNSLSQAPQRPSILDRISALCDPDDDDDDESIKEGNTSSCVPSKLNLECMIEDGTSVKGKNEDAMTIEKSIVENKKIEEQIQESFPSNRNFTQRYKLFKELKVFLIKFDALKDSNTTYSATEIEKMTERFTNSYVNLNSSKLQNSNEKSINNASFISIFSKDSNVNIEKSTDATKHVSSSSIDSIPNKDIYTTTKRTQSTIKLLSNSSEKLFPNLTRNAKIQQERSSQIQKVCHNLTKIFEDSSKKRFAQNTISNAKQKLIVPTPTIKSTLLYSSQKPTNKNFEISNVVENIDNIDKSTGKTFSLKRKISEISSPMENSMKLVIDARSQEQAGVDTSGVTNFKLHLSKKNKKYESEKHIFAPKTCRKTTNDTTTKIATKKSASTSYSSIVSPKKHKRLRDNHGYKCIVCDLCFEDYSDLQQHLITHTQKQNNSLGNSLKTSNMSPEKSQDMISQSSKANISEPSKVSSEHKSGGHTASQYVTKKDNGQQKKKDAITKSSLNKEKNKKRIKRISNSNKCSICSKPFEAMADLAAHIFLHTEKELQEAYIHAKQKLNGTKKYKQTRIEQTANSIKNVNSTVNTADNIIERTQKVNDKEETLLIRKPNKSLITEDSEIRDTESIIMKENYSQDIELCLPTKSKKGGNKYLFTVCECHNKPGTNENCLQIEIVLLCHTCRVIFRSMKCFETHYRLPQYVKCNQNHLISGRSPNLFCATCGMIFSSVKDVRHHLEMHARFKKDCTMDFRCNICKVIFLGIGSLFYIHWSKHSRDSFWMASEKSFPKDSIINLKLRKAENSSTQNAMTLNTCVEKYIEVAEHVCYNCKLPFISQDDLKNHISECRKFKAVQNASIVENSNTYLAIRITCNLCDDTFINKKTEFYKHMKDKHNLSTEPRFICTSLTAENMVFICSVCTAMTKSLDDFEDHWLKHNTTHVYFTCSHCSKIYHNSLNSFINHAKKHGIDTNDVVSCVVSYKQTKFSCKFCNIGFDSRKNMQEHAIIHDTNSQQIIPKISQVTNQDSSATVSETDCASNFAKLVELTIEKQIDESLQMETQKMDKASEICPIESNIDKSRDKLIKILEGNEDDSEHELIIDLTKQSEECNEVLKEEGSKERQTTSNLTLDKSSINQTCVMSENNKANALVTNVNIQVSSQNVAKSKTQNVTDSLLTAKNINPQISNTNIKPTNILQTNNVSNHNNLLDIEKKTSDQSITKDIESTQNVEVHDRISIINQEESTILTKETSEKQSPPRPRQGFLRVKTLAELTGSANLCELSNSAVENANELAKHSKSHHASNKDNNEHKTTEKEIVSKQSEINKFIANKKLTIVPNTNLNTLLLSSSNSGNIKLVFQNPVMKSNTTIKNNQQPQQFQINTNQKEHSSSLENVTSAYHKNLPACNFVRTATAMPRFTILKPTKVKAHSANIPNVQRTHVASCSTNENRQKSSSEKNNSSHTVHKCNHCNFASSNSAEFLMHNLPGNRSTCKKQYLQNDTQEQTLNKFDNSQTIPTIDTIQNNPNPKQRQQTTMEQPGINYASSSVCDQYSYLAAGTSNNSNQILKQNQPIITNHPITENTTPIYYKNPNPSSGGMSIVINQTTPTVQSMPAIGILQQPAQQQIYQQQDLVQFSESNAIFQLANQPSVRTYQVRYVCPYCSKSFVSEDYMQIHINEQHNFICNICSLRLYSFNDLNLHKIQHNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218063;
90% Identity: iTF_00223495;
80% Identity: -