Basic Information

Insect: Bombus pascuorum
Gene Symbol: -
Assembly: GCA_905332965.1
Location: HG995268.1:8543345-8550327[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0033 0.34 11.8 0.6 1 23 789 811 789 811 0.97

2 11 0.0014 0.15 12.9 0.1 2 23 902 923 901 923 0.96

3 11 5.9 6.2e+02 1.5 3.4 3 21 1057 1075 1056 1076 0.96

4 11 0.036 3.8 8.5 0.5 3 23 1097 1117 1095 1117 0.96

5 11 0.0028 0.29 12.0 0.2 1 20 1201 1220 1201 1222 0.94

6 11 0.087 9.1 7.3 0.2 1 23 1290 1312 1290 1312 0.97

7 11 6.1 6.4e+02 1.5 3.0 1 13 1319 1331 1319 1342 0.73

8 11 0.012 1.2 10.0 1.4 1 23 1361 1383 1361 1383 0.97

9 11 0.79 84 4.3 1.7 1 19 1837 1855 1837 1857 0.93

10 11 2.6e-05 0.0027 18.4 0.2 1 23 2028 2051 2028 2051 0.96

11 11 0.56 59 4.7 0.6 1 23 2053 2075 2053 2075 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0033	0.34	11.8	0.6	1	23	789	811	789	811	0.97
2	11	0.0014	0.15	12.9	0.1	2	23	902	923	901	923	0.96
3	11	5.9	6.2e+02	1.5	3.4	3	21	1057	1075	1056	1076	0.96
4	11	0.036	3.8	8.5	0.5	3	23	1097	1117	1095	1117	0.96
5	11	0.0028	0.29	12.0	0.2	1	20	1201	1220	1201	1222	0.94
6	11	0.087	9.1	7.3	0.2	1	23	1290	1312	1290	1312	0.97
7	11	6.1	6.4e+02	1.5	3.0	1	13	1319	1331	1319	1342	0.73
8	11	0.012	1.2	10.0	1.4	1	23	1361	1383	1361	1383	0.97
9	11	0.79	84	4.3	1.7	1	19	1837	1855	1837	1857	0.93
10	11	2.6e-05	0.0027	18.4	0.2	1	23	2028	2051	2028	2051	0.96
11	11	0.56	59	4.7	0.6	1	23	2053	2075	2053	2075	0.95

Sequence Information

Coding Sequence: ATGGAAATTTCTGAAGAAGAATTATTTTCTTCACATCATTCGGTTGATAATTACTCAGAGCAAGTAATTAACATGTCATTACCATTACCAAAGCCAAAACCTAAAGATTCTAATGCAAAATACAAAAAAATCCAAGATACTAGCTATTATATATTTAAGAAAAGATCAACAAGTAATAGGTTGAAACAATTGTTAAAAAGAGGAGATACATTAGAGGATTTGTGTAAATTATTGTGTAAGCCAGTTATTGTGAATGTTACAAAATTATCAGTATCAGAGATAAAACAATGGTGTAAAAAAGACTTGCATCAATCTAAAGCAGAAAATATATTAACACAGAAAAAAAAATGTAAACCACGAATAAAATTCTATAAAAAAAAGAAAAAGTCCAAGCAGAAGCAATTATCTTCCTTATGTAATTCTGAAAATGAAGTTAAACCTCAAAATATGTTATTTTCCAAGAAAGCAGAGATTGAAAACAAGAATTGTACAAAAAATTTATTAGAAGATGTTAAACAACCACATATAAAATTACAAAGAATAGATGAAGTAATCAATAAAATAGCACAGTCATTTGCAAGAGTAACTCCGATTAAAGAATGTGAAACAATTATTCAAACAGAAACAAATATTCAATCTGAATGCGAAACAAATATTCAAACAAGATGTGAAACAAGTGTTCAAACAAGATGTGACTCAAGTATTCAAACAGAAGAAATTCAAACTGAATTAAGTATATCTGCACCAGAACAACTAAAATTATCATCTGTAAATATCAATACAGATAAATATCAACAAAATCTTAAAACTGAGACAATAGCAATTAGGTCTCATGCAAATGAGACTCTACAATTGAATAAATGTGCAGATTCAGTCTCTGATTTATATTCTGATACTAATTCTGATTTTAAAACCAATTCTGATACTGATTCTGATTCTAATACTGGAAATTCTAGAAATACTAATGAAAGGAGACATAGAATTACATATAATTCTCATGCAGCTGATAATAATCGTTACAATAAGAGCAATGCTAATAATGCAAGAATAATTTCGAATAAATTAAAAAGGTTAACGAGAAATTCATTAAAACAAACAAGCCAAATTAACCTAGTAAATGAAAAATACAATATTATTAAGGAAAGGTGTACAGATAAAAATTCATTGTCTCAAGCACCACAAAGACCAAGTATATTAGACCGTATATCTGCGCTATGTGATCCTGATGATGATGATGATGATGAAAGTATTAAAGAAGGTAATACTTCCAGTTGTGTGCCTTCAAAATTAAATCTTGAATGTATGATAGAAGATGGTACTTCTGTAAAAGGAAAGAATGAAGATGCTATGACTATAGAGAAATCAATTGTAGAAAACAAAAAGATTGAAGAACAAATACAAGAATCATTTCCTTCCAATAGAAATTTTACACAAAGATATAAATTATTTAAAGAATTAAAAGTTTTTTTAATAAAATTTGATGCTCTGAAAGACTCCAATACTACATATTCAGCAACTGAAATTGAGAAAATGACAGAAAGATTTACGAATTCTTACGTGAATTTAAATTCTTCAAAACTTCAAAATAGTAACGAAAAATCTATAAATAATGCATCATCTATTTCAATCTTTTCAAAAGATTCTAATGTTAACATTGAGAAGTCTACAGATGCTACAAAACATGTTTCAAGCTCAAGTATTGATAGCATTCCAAATAAAGATATTTATACAACTACCAAAAGAACACAAAGTACAATTAAATTATTATCAAATTCTTCAGAAAAATTATTTCCAAATTTAACCAGAAATGCAAAGATACAACAAGAGAGAAGTTCACAAATTCAAAAAGTTTGTCATAATTTAACAAAAATTTTTGAAGACAGTTCTAAAAAAAGGTTTGCACAGAATACTATTAGTAATGCAAAGCAGAAATTGATTGTTCCAACCCCTACTATCAAATCTACATTATTATATTCTTCACAAAAACCTACCAATAAAAATTTTGAATTATCGAATGTGGTAGAAAACATTGATAATATAAACAAATCTACTGGTAAAACGTTCTCCTTAAAGAGAAAGATATCAGAGATTTCTTCGCCTAAGGAGAATTCTATGAAATTGGTTATTGATGCAAGATCTCAAGAACAAGCGGGAGTTGATACATCTAGTGTTACTAATTTCAAATTGCATCTTTCAAAGAAAAATAAAAAACATGAGTCAGAGAAACATATATTTGCACCTAAAACATGTAGAAAAACTACAAATGTTACAACTACTAAAATAGCTACAAAGAAAAGTGCTTCAACTTCTTATTCTTCCATACTATCTCCTAAAAAACATAAGAGACTTAGAGATAATCATGGTTATAAATGTATTGTTTGTGATCTTTGTTTTGAAGATTATCCTGATTTACAACAACACCTAATTACACATACACAAAAGCAAAATAATAGTTTAGGAAATTCATTGAAAACTTCCAACATGTCACCTGAAAAATCTCAGGACATGATATCTCAATCCTCAAAAGCAAGTATATCAGAACCATCAAAAGTGTCAAGTAAGCACAAGAGTGGAGGACATACAGCATCACAATATGTCACCAAGAAAGATAATGGACAACAAAAGAAAAAAGATGCTATAACAAAAAGCTCATTGAATAAAGAAAAGAGTAAAAAGAGGATTAAGCGTATTAGTAATTCAAATAAGTGTAGTATTTGTTCAAAACCTTTTGAAACAATGGCTGATTTGGCAGCTCATATCTTCTTACATACAGAGAAAGAATTGCAACAAGCATATAAACTCGCAAAACAAAAATTGAATGGAACAAAAAAGTATAAACAAACTAGAACTGAACAAACAGCTAACAGTATTAAAAATGTAAATAGCACTGTAAATACTGCAGATAATATAATTGAAAGGACTCAGAAAGTTAATGATAAGGAAGAAACGTTGCTTATACGGAAACCAAATAAATCATTAATTACAGAAGATTCAGAAATTAGAGACACAGAATCTATTATTATGAAAGAAAACTATTCGCAAGATATAGAATTATGTCAGCCAACAAAATCGAAAAAAGGTGGTAATAAATACTTGTTCACAGTATGCGAATGTCATAATAAACCAGGAACTAATGAAAATTGTTTGCAAATCGAAATAGTTCTTCTTTGTCACACTTGCAGGGTGATATTTAGAAGTATGAAATGTTTCGAAACCCATTATCGTCTTCCCCAATATGTAAAATGTAATCAAAACCGCTTAACTAGTGGTCGTTCTCCAAATTTATTTTGCGCTACCTGTGGTATGATATTTAGTTCAGTTCAAGATGTGCGCCATCACTTAGAAATGCATGCTCGTTTTAAAAAAGACTGTACAATGGATTTTCGATGTAACATTTGCAAGGTTATATTTCTGGGAATAGGAAGCCTTTTTTATATCCATTGGTCAAAGCATTCCAGAGATCCTTTTTGGATGGCTAGTGAAAAATCGTTTCCAAAAGATTCCATAATAAACTTGAAGCTGAGAAAGGCAGAGAATTCTTCTACACAAAATGCAATGACTTTGAATACGTGTGTAGAAAAATACATTGAAGTAGCAGAACATGTCTGTTATAATTGTAAACTGCCTTTTATTAGTCAAGATGATTTAAAGAATCATATTTCAGAATGTAGAAAATTTAAGGCAGTTCAAAATGCATCTATTGTAGAAAACTCTAATACATATCTCGCAATAAGGATAACTTGTAATTTATGCGATGATATTTTTATTAACAAAAAAACAGAATTTTATAAACATATAAAAGATAAACATAATTTGAGTACCGAACCTCGATTTATTTGTACATCATTGACGGCTGGAAATATGATATTTATTTGCAGTGTCTGCACGGCAATGACTAAAAGTTTAGATGACTTTGAGGATCATTGGTTGAAACATAATACAACTCATGTATATTTTACTTGTTCGCATTGTAGTAAAATATATCACAACAGCTTAAATTCCTTCATAAACCATGCTAAAAAACATGGTATTGATACTAATGATGTAGTGTCCTGTGTAGTAAGTTATAAACAAACAGAATTCACTTGTAAATTTTGTAATATTGGTTTTGATTCTCATAAAAATATGCAGGAGCATGCTATTATTCATGACACAAACAGCCAACAGATAAGTCCTAAGATTAGTCAAGTTACAAATCAAGACAGCTCTGCAACAGCATCAGAGACAGATTGTGCTTCCAATTTTGCAAAGCTGGTTGAAGTGACTATTGAAAAGCGTATGGATGAACCATTACAAATGGAGACTCAAAAAATGGATAAGGCAAGCGAAATTTGTCCAATAGAATCTAATATAGACAATAGTACGGACAAATTAATCAAGATATTAGAAGGAAATGAAGATGATTCTGAACATGAATTAATAATAGACTTGACAAAACAATCAGAAGAATGTAATGAAGGATTAAAAGAAGAAGGAAGTAAGGAAAGACAGACTACATCTAATCTTACATTAGATAAATCTTCTATCAATCAAACTTGTGTCATGTCGGAGAATAATAAAGCTAATGCATTGGTAACGAATGTAAATATCCAAGTATCTTCACAAAATGTTGCAAAATCTAAAACTCAAAATGTTACAGATTCTCTTTTAACTGCTAAAAACATAAATCCTCAAATATCTAATACAAACATTAAGTCTACAAATATTTTGCAAACAAATAATGTTAGTAATCATAATAATCTACTAGATATAGAAAAAAAAACAAGTGACCAATCAATCACAAAAGATATAGAAAGTACACAAAATGTTGAAGTTCATGACAGAATTTCAATTATAAATCAAGAAGAATCAACAATTTTAACAAAAGAAACATCAGAGAAACAAAGTCCACCAAGACCAAGACAAGGGTTCTTAAGAGTGAAGACTCTTGCAGAACTTACAGGTTCTGCAAATTTATGTGAACTTAGCAATTCTGCTGTTGAAAATGCTAATGAATTAGCCAAGCACTCCAAAAGTCACCATGCTTCGAACAAAGATAATAATGAACACAAAACTACAGAGAAAGAAATAGTTTCAAAACAATCTGAAATGAACAAATTTATTGCTAATAATAAATTAACAATTATTCCTAATACAAATTTAAATACATTACTATTATCTTCATCTAATTCAGGCAATATAAAATTACTGATTCAGAATCCAGTTATGAAACCTAATACTACAATAAAAAATAACCAACAACCACAGCAATTCCAAATAAATACAAATCAAAAGGAACACTCATCTTCTCTGGAAAATGTAACATCAGCATATCATAAAAACTTACCAGCTTGCAATTTCGTTCGAACAACCACAGCTATGCCACGTTTTACTATTTTGAAACCTACCAAAGTAATAGCACATTCTGCTAATATACCGAATGTACAGAGAACACATGTAGCATCCTGTTCTACCAATGAAAATAGACAAAAGTCTTCTTCTGCAAAAAATAATTCAAGTCATACTGTACATAAATGTAAGCATTGCAATTTTGCTTCAAATAATTCTGCAGAATTCTTAATGCACAATTTACCAGGTAATCGTTCAACTTGTAAGAAGCAATATTTGCAAAATGACACCCAGGAGCAAAAACTTAACAAATTTGATAATTCACAAACAATACCCACAATTAATACTATTCAAAACAATCCAAATCCTAAACGACGTCAACAAACTACTATGAAGCAACCAGGAATTAACTATGCGTCTTCATCTGTCTGTGATCAGTATTCTTATCTTGCTGCAGGCACTTCGAATAATAGTAATCAAATACTTAAACAAAATCAACCAATAATAACTAATCATCCAATAACAGAAAATACCACCCCTATTTATTATAAAAATCCAAATCCTAGCAGTGGTGGAATGTCAATAGTGATCAATCAAACTACACCTACTGTTCAGAGTATACCCACAATAGGAATCCTGCAACAACCAGCGCAGCAACAAATATATCAACAACAGGATTTAATTCAATTTTCCAAATCGAATGCTGTTTTCCAACTGGCTAATCAACCAAGTGTTAGAACTTATCAAGTTAGATATGTATGTCCTTATTGTTCGAAAAGTTTTGTTTCTGAAGACTATATGCAGATACATATAAATGAGCAACACAATTTTATATGTAATATTTGTAGTTTGCGTTTATACAGTTTTAACGATTTAAATCTTCATAAAATTCAGCATAATTTGTTGTAA
Protein Sequence: MEISEEELFSSHHSVDNYSEQVINMSLPLPKPKPKDSNAKYKKIQDTSYYIFKKRSTSNRLKQLLKRGDTLEDLCKLLCKPVIVNVTKLSVSEIKQWCKKDLHQSKAENILTQKKKCKPRIKFYKKKKKSKQKQLSSLCNSENEVKPQNMLFSKKAEIENKNCTKNLLEDVKQPHIKLQRIDEVINKIAQSFARVTPIKECETIIQTETNIQSECETNIQTRCETSVQTRCDSSIQTEEIQTELSISAPEQLKLSSVNINTDKYQQNLKTETIAIRSHANETLQLNKCADSVSDLYSDTNSDFKTNSDTDSDSNTGNSRNTNERRHRITYNSHAADNNRYNKSNANNARIISNKLKRLTRNSLKQTSQINLVNEKYNIIKERCTDKNSLSQAPQRPSILDRISALCDPDDDDDDESIKEGNTSSCVPSKLNLECMIEDGTSVKGKNEDAMTIEKSIVENKKIEEQIQESFPSNRNFTQRYKLFKELKVFLIKFDALKDSNTTYSATEIEKMTERFTNSYVNLNSSKLQNSNEKSINNASSISIFSKDSNVNIEKSTDATKHVSSSSIDSIPNKDIYTTTKRTQSTIKLLSNSSEKLFPNLTRNAKIQQERSSQIQKVCHNLTKIFEDSSKKRFAQNTISNAKQKLIVPTPTIKSTLLYSSQKPTNKNFELSNVVENIDNINKSTGKTFSLKRKISEISSPKENSMKLVIDARSQEQAGVDTSSVTNFKLHLSKKNKKHESEKHIFAPKTCRKTTNVTTTKIATKKSASTSYSSILSPKKHKRLRDNHGYKCIVCDLCFEDYPDLQQHLITHTQKQNNSLGNSLKTSNMSPEKSQDMISQSSKASISEPSKVSSKHKSGGHTASQYVTKKDNGQQKKKDAITKSSLNKEKSKKRIKRISNSNKCSICSKPFETMADLAAHIFLHTEKELQQAYKLAKQKLNGTKKYKQTRTEQTANSIKNVNSTVNTADNIIERTQKVNDKEETLLIRKPNKSLITEDSEIRDTESIIMKENYSQDIELCQPTKSKKGGNKYLFTVCECHNKPGTNENCLQIEIVLLCHTCRVIFRSMKCFETHYRLPQYVKCNQNRLTSGRSPNLFCATCGMIFSSVQDVRHHLEMHARFKKDCTMDFRCNICKVIFLGIGSLFYIHWSKHSRDPFWMASEKSFPKDSIINLKLRKAENSSTQNAMTLNTCVEKYIEVAEHVCYNCKLPFISQDDLKNHISECRKFKAVQNASIVENSNTYLAIRITCNLCDDIFINKKTEFYKHIKDKHNLSTEPRFICTSLTAGNMIFICSVCTAMTKSLDDFEDHWLKHNTTHVYFTCSHCSKIYHNSLNSFINHAKKHGIDTNDVVSCVVSYKQTEFTCKFCNIGFDSHKNMQEHAIIHDTNSQQISPKISQVTNQDSSATASETDCASNFAKLVEVTIEKRMDEPLQMETQKMDKASEICPIESNIDNSTDKLIKILEGNEDDSEHELIIDLTKQSEECNEGLKEEGSKERQTTSNLTLDKSSINQTCVMSENNKANALVTNVNIQVSSQNVAKSKTQNVTDSLLTAKNINPQISNTNIKSTNILQTNNVSNHNNLLDIEKKTSDQSITKDIESTQNVEVHDRISIINQEESTILTKETSEKQSPPRPRQGFLRVKTLAELTGSANLCELSNSAVENANELAKHSKSHHASNKDNNEHKTTEKEIVSKQSEMNKFIANNKLTIIPNTNLNTLLLSSSNSGNIKLLIQNPVMKPNTTIKNNQQPQQFQINTNQKEHSSSLENVTSAYHKNLPACNFVRTTTAMPRFTILKPTKVIAHSANIPNVQRTHVASCSTNENRQKSSSAKNNSSHTVHKCKHCNFASNNSAEFLMHNLPGNRSTCKKQYLQNDTQEQKLNKFDNSQTIPTINTIQNNPNPKRRQQTTMKQPGINYASSSVCDQYSYLAAGTSNNSNQILKQNQPIITNHPITENTTPIYYKNPNPSSGGMSIVINQTTPTVQSIPTIGILQQPAQQQIYQQQDLIQFSKSNAVFQLANQPSVRTYQVRYVCPYCSKSFVSEDYMQIHINEQHNFICNICSLRLYSFNDLNLHKIQHNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218063;
90% Identity: iTF_00223495;
80% Identity: -