Basic Information

Insect: Bombus dahlbomii
Gene Symbol: -
Assembly: GCA_037178635.1
Location: CM074101.1:24004287-24010905[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00023 0.021 15.6 0.6 1 23 791 813 791 813 0.97

2 11 0.035 3.3 8.7 0.1 2 23 908 929 907 929 0.95

3 11 0.052 4.8 8.1 0.3 3 23 1103 1123 1101 1123 0.95

4 11 0.0032 0.29 12.0 0.2 1 20 1207 1226 1207 1228 0.94

5 11 8.2 7.6e+02 1.2 1.3 2 23 1253 1276 1252 1276 0.71

6 11 0.099 9.2 7.3 0.2 1 23 1296 1318 1296 1318 0.97

7 11 3.4 3.2e+02 2.4 1.7 1 13 1325 1337 1325 1348 0.80

8 11 0.022 2 9.3 0.1 1 23 1367 1389 1367 1389 0.96

9 11 0.34 31 5.6 1.5 1 19 1843 1861 1843 1863 0.94

10 11 3e-05 0.0028 18.3 0.2 1 23 2052 2075 2052 2075 0.96

11 11 0.13 13 6.8 0.6 1 23 2077 2099 2077 2099 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00023	0.021	15.6	0.6	1	23	791	813	791	813	0.97
2	11	0.035	3.3	8.7	0.1	2	23	908	929	907	929	0.95
3	11	0.052	4.8	8.1	0.3	3	23	1103	1123	1101	1123	0.95
4	11	0.0032	0.29	12.0	0.2	1	20	1207	1226	1207	1228	0.94
5	11	8.2	7.6e+02	1.2	1.3	2	23	1253	1276	1252	1276	0.71
6	11	0.099	9.2	7.3	0.2	1	23	1296	1318	1296	1318	0.97
7	11	3.4	3.2e+02	2.4	1.7	1	13	1325	1337	1325	1348	0.80
8	11	0.022	2	9.3	0.1	1	23	1367	1389	1367	1389	0.96
9	11	0.34	31	5.6	1.5	1	19	1843	1861	1843	1863	0.94
10	11	3e-05	0.0028	18.3	0.2	1	23	2052	2075	2052	2075	0.96
11	11	0.13	13	6.8	0.6	1	23	2077	2099	2077	2099	0.95

Sequence Information

Coding Sequence: ATGGAAATTTGTgacaaagaattattttcttcacaTCATTCGGTTGATAATTACACAGAGCAAGTAATTAACATGTCATTACCATTACCAAAGCCAAAACCTAAAGGTTCTAAtgcaaaatacaaaaaaatccAAGATAATAGTTGTTTTATATTCAGGAAAAGATCAAGAAGTAATAGGTTGAAACAATTGTTAAGAAGAGGAGATACATTAGAAGATTTGTGTAAATTATTGTGTAAGCCAGTTATTGTgaatgttacaaaattatcaGTATCAGAGATAAAACAATGGTGTAAAAAAGACTTGCATCAATCTGaagcagaaaatatattaacacagaaaaaaaaatttaaaccAAGGATACCACAAACAAGAtcctgtaaaagaaagaaaaagtccAAGCAGAAGCAGTTATCTTGCTTATGTAATTCTGAAAATGAAGTTAAACCtcaaaatatgttattttcCAAGAAAGCAGAGAttgaaaacaagaattgtacaaaaaatttattggaaGATGTTAAACAACCatacataaaattacaaagaatagATGAAGTAATCAATAAAATAGCACAGTCATTTGCAAGAGTAGCTCCAATTAAAGAATGTGATGAAACAATTATTCaaacagaaacaaatattcaatCTGAATGcgaaacaaatattcaaacaagATGTGAAACAAGTGTTCAAGTAAGATGTGACACAAGTATTCAAACAGAAGAAATTCAAACTGAATTAAGTATATCTGCACCAGAACAACTAAAATTATCATCTGTAAATATTGATACAGATAAATATCAACAAAATCTTAGAACTGAGACAATAGCAATTAGGTCTCATGCAAATGAGACTCTACAATTGAATAAATGTGCAGATTCAGTCTCTGATTCATATTCTAATACTAATTCTGATTTTAAATCTAATTCTGATTCTGATTCTAATACTGGAAATTCCAGAAATACTAATGAAAGGAGacatagaattatatataattctcaTACAGATGATAATAATCGTTACAATAAGAGCAATGCTAATAATGcaagaataattttgaataaattaaagagGTTAACGAGAAATTCATCAAAACAAACAAGCAAAATTAAcctaataaatgaaaaatacaatattattaagaaaaggTGTACAGATAAAAGTTCATTGTTTCAAGCACCACAAAGACCAAGTATATTAGACCGTATATCTGCGCTATGTGATcctgatgatgatgatgatgatgaaagTACTAAGGAAGGTAATACTGCCAGTTGTGTGCCTTCAAAATTAAATCTTGAATGTATGATAGAAGACGGTACTTctgtaaaaggaaagaatgaaGATGCTATGACTATAGAGAAACCAATTGTAGAAAACGAAAAGATTGAAGAACAAATACAAGAATCATTTCCTTCCGATAGAAATTTTACacaaagatataaattgtttaaagaattaaaagtttctttaataaaatttgatgctCGGAAAGACTCCAATGCTACATATTCAGCAactgaaattgagaaaatgaCAGAAAGATTTATGAATTCTTACGTGAATTTAAATTCTTCAAAACTTCAAAGTAGTAACgaaaaatctataaataatgcatcatttatttcaatcttttcaaAAGATTCTACTGTTAACATTGAGAAATCTACAGATGCTACAAAACATGTTTCAAGCTCAAGTATTGATAGCATTCCAAATAATGATGTTTATACAACTACCAAAAGAACACAAAGCACGATTAAATTATCATCAAATTCTTCAGAAAAATTATCTCCAAATTTAACCAAAAATGCAAAGATACAACAAGAGAGAAGTTCACAAATTCAAAAAGTTTGtcataatttaacaaaaatttttgaaGACAGTTCTAAAAAAAGGTTTGCACAGAATACTATTAGTAATGCAAAGCAGAAATTGATTGTTCCAACCCCTACTATCAAAtctacattattatattcctCACAAAAATCTgccaataaaaattttgaattatcaAATGTGGTAGAAAACATTGATAATATAGACAAATCTACTGGTAAAACGTTCTacttaaagaaaaagataccAGAGATTTCTTCACCTAAGAAGAATTCTATGAAATTGGTTATTGATGCAAGATCTCAAGAACAAGTGGGAGTTGATACATCTGGTGTTACTAATTTCAAATTGCatctttcaaagaaaaataaaaaacacgaGTCAGAGAAACATACATTTGCACCTAAAACATATGGAAAAACTACAAATATTACAACTACTAAAATAGCTACAAAGAAAAGTGCTTCAACTTCTTATTCTTCCATAGTATCtcctaaaaaatataagagaCTTAGAGATAATCATGGTTATAAATGTATTGTTTGTGATCTTCGTTTTAAAGATTATTCTGATTTACAACAACACCTAATTACACATACACAAAAGCAAAATAATAGTTTAGCAAATTCATTGAAAACTTCCAACATGTCACCTGAAAAATCTCAGGACATGATATCTCAATCCTCAAAAGCAAAGATATCAGAACCATCAAAAGTATCAAGTGAGCACAAGAGTGGAGAACATACAGCATCACAATATAGAAAGATAATGGACACCAAGAAAGATAATGgacaacaaaagaaaaaagatgctATAACAAAAAGCTCATTGAgtaaagaaaagaggaaaaagaggatTAAGcgtattaataattcaaataagtGTAGTATTTGTTCAAAACCATTTGAAGCAATGACTGATTTAGCAGCTCATATCTTCTTACATACAGAGAAAGAATTGCAACAAGCATATAAACTCgcaaaacaaaaattgaatggAACAGAGAAGTATAAACAAACTAGAACTGAGCAAACAGCTAAcagtattaaaaatgtaaatagcaCTGTAAATACTGCagataatataattgaaaagacTCAGAAAGTTAATGATAAGGAAGAAACATTGCTTATACGGAAACcaaataaatcattaattacaGAAGATTCAGAAATTAGAGACACAGAATCTATTATTATGAAAGAAAACTATTCGCAAGATATAGAATTATGTCTGCCAgcaaaatcgaaaaaagatggTAATAAAAACTCGTTCACAGTATGTGAATGTCATAATAAACCAGGAACTAATGAAAATTGTTTGCAAATCGAAATAGTTCTTCTTTGTCACACTTGCAGGGTACTATTTAGAAGTATGAAATGTTTCGAAACCCATTATCGTCTTCCCCAATATCTAAAATGTAATCAAAACCACTTAACTAGTGGTCGTTCTCCAAATTTATTTTGTGCTACCTGTGGTATGATATTTAGTTCAGTTCAAGATGTGCGTCATCATTTAGAAATACATGCTCGTTTTAAAAAAGACTGTACAATGGATTTTCGATGTAACATTTGCAAGGTTATATTTCTGGGAATAGGAAGCCTTTTTTATATCCATTGGTCAAAGCATTCCAGAAATTCTTTTTGGATGGCTAGTGAAAAATCGTTTCCAAAAGATTCCATAATAAACTCGAAGCTGAGAAAGACAGAGAATTCTTCTACACAAAATGCAATGACTTTGAGTACGTGTGTAGAAAAATACATTGAAGTAGCAGAACATGTCTGCTATAATTGTAAACTGCCTTTTATTAGTCAAGATGATTTAAAGAATCATATTTCAgaatgtagaaaatttaagTCAGTTCAAAATGCATCTATTGTAGAAAACTCTAATACATATCTCGCAATAAGGATAACTTGTAATTTATGCGATGATacttttattaacaaaaaaacagaattttataaacatatgaaAGATAAACATAATTTGAGTACCGAACCTCGATTTATTTGTACATCATTCACGGCTGGAAATAAGGTATTTATTTGCAGTGTCTGCACGGCAATGACTAAAAGTTTAGATGACTTTGAGGATCATTGGTTGAAACATAATACAACTCATGTATATTTTACTTGTTCGCATtgtagtaaaatatatcacaaCAGCTTAAATTCCTTCATAGACCATGCTAAAAGACATGGTATTGATGCTAATGATGTAGTGTCCTGTGTAGTAAGTTATGAACAAACAAAATTCagttgtaaattttgtaatattggTTTTGATTCTCCTCAAAGTATGCAGGAGCATGCTATTATTCATAACACAAACAGCCAACAGATAAGTCCTAAGATTAGTCAAGTTACAAATCGAGACAGCTCTGCAACAGTATCAGAGACAGATTGTGCTTCCAATTTTGCAAAGCTGGTTGAATTGACTATTGAAAAGCAGATGGATGAATCATTACGAATGAAGactaaaaaaatggaaaaggcAAGCGAAATTTGCCCAATAGAATCTAGTATAGACAAAAGTAGGGACAAATTAATCAAGATATTAGAAGGAAATGAAGATGATTCTGAAcatgaattaataatagacTTGACAAAACAATCAGAAGAATGTAATGAAGGattaaaggaagaaggaagtaAGGAAAGACAAACTACATCTAATCTTACATTAGATAAATCTTCTATCAATCAAATTTGTGTCATGTCGGAGAATAATAAAGCTAATGCATTggtaacaaatttaaatatccaaGTATCTTCACAAAATGttgtaaaatctaaaattcaaaatgttaCAGATTCTCTTTTAACTGCAAAAAACATAAATCCTCAAATATCTAATTCAAACATTAAATctacaaatattttgcaaacaaATAATGTTAGTAATCATAATAATCTACTAGacatagaaaaaaaaacaagtgACCAATCAATCACAAAAGATATAGAAAGTACACGAAATGTTGAAGTTCATGAcagaatttcaattataaatcaagaaaaatcaacaattttaacaaaagaaaCAACCGAGAAACAAAGTCCATCAAGGCCAAGACAAGGGTTTTTAAGAGTGAAGACTCTTGCAGAGCTTACAGGTTCTGCAAATTTATGTGAACTTAGCAATTCTGCTGTTGAAAATGCTAATGAACTAGCCAAGCACTTCAAAAGTCACCATGCTTCGAACAAAGATAATAATGAACACAAAACTACAGAAAAAGAATTAGTTTCAAAACAATctgaaataaacaaatttattgctaataaaaaattaacaattgttCCTAATACAAATTCAAATACATTACTATTATCTTCATCTAATTCAGGCAATATAAAATTAGTGATTCAGAATCCAGTTATGAAACCTAATACTACAGTAGAAAATAATCAACAACCACAGCAATTccaaataaatacaaatcaaAAGGAACACTCATCTTCTCTGGAAAATGTAACATCAGCATATCATAAAAACTTACCAGCTTGCAATTTCGTTCGAACAACCACAGCTATGCCACGTTTTACTATTTTGAAACCTACCAAAGTAATAGCACATACTGCTAATATACCGAATGTACAGAGAACACATGTAGCATCCTGTTCTACcaatgaaaataaacaaaagtCTTCTTCTGCAAAAAAGAATTCAAGTCATACTGTACATAAATGTAGTCATTGCAATTTTGTTTCAAGTAATTCTGCAGAATTCTTAATGCACAATTTACCAGGTAATCATTCAACTTGTAAGAAGcaatatttgcaaaatgaCACCCAGGCGCAAGAACTTAACAAATTTGATAATTCAGAAACAATACCCACAATTAATACTATTCAAAACAATCTAAATCCCAAACGATGTCAACAAACTACTATGAAGCAACCAGGAATTAAGTATGCGTCTTCATCTGTCTGTGATCAATATTCTTATCTTGCTGCAGGCACTTCGAATAATAGTAATCAAATACTTAAACAAAATCAACCAATAATAACTAATCATCCAATAACAGAAAATACCACCcctatttattataaaaatccaAATCCTAGCAGTGGTGGAATGTCAATAGTGATCAATCAAACTACACCTACTGTTCAGAGTATACCTACAATAGGAATCCTGCAACAACCAGCTCAGCAACAAATATATCAACAACAGGTATACAATGAATCAGTGACAATTATAAATACACCATACTTGCATCAACCACAAGATTTAGTTCAATTTTCCGAATCGAATGCTGTTTTCCAACTGGCAAATCAACCAAGTGTTACAACTTATCAAGTTAGATACGTATGTCCTtattgttcgaaaagttttgTTTCTGAAGACTATATGCAGATACATATAAATGAGCAAcacaattttatatgtaatatttgtagTTTGCGTTTATACAGTTTTAGCGATTTAAATCTTCATAAAATTCAGCATGATTTGTTGTAA
Protein Sequence: MEICDKELFSSHHSVDNYTEQVINMSLPLPKPKPKGSNAKYKKIQDNSCFIFRKRSRSNRLKQLLRRGDTLEDLCKLLCKPVIVNVTKLSVSEIKQWCKKDLHQSEAENILTQKKKFKPRIPQTRSCKRKKKSKQKQLSCLCNSENEVKPQNMLFSKKAEIENKNCTKNLLEDVKQPYIKLQRIDEVINKIAQSFARVAPIKECDETIIQTETNIQSECETNIQTRCETSVQVRCDTSIQTEEIQTELSISAPEQLKLSSVNIDTDKYQQNLRTETIAIRSHANETLQLNKCADSVSDSYSNTNSDFKSNSDSDSNTGNSRNTNERRHRIIYNSHTDDNNRYNKSNANNARIILNKLKRLTRNSSKQTSKINLINEKYNIIKKRCTDKSSLFQAPQRPSILDRISALCDPDDDDDDESTKEGNTASCVPSKLNLECMIEDGTSVKGKNEDAMTIEKPIVENEKIEEQIQESFPSDRNFTQRYKLFKELKVSLIKFDARKDSNATYSATEIEKMTERFMNSYVNLNSSKLQSSNEKSINNASFISIFSKDSTVNIEKSTDATKHVSSSSIDSIPNNDVYTTTKRTQSTIKLSSNSSEKLSPNLTKNAKIQQERSSQIQKVCHNLTKIFEDSSKKRFAQNTISNAKQKLIVPTPTIKSTLLYSSQKSANKNFELSNVVENIDNIDKSTGKTFYLKKKIPEISSPKKNSMKLVIDARSQEQVGVDTSGVTNFKLHLSKKNKKHESEKHTFAPKTYGKTTNITTTKIATKKSASTSYSSIVSPKKYKRLRDNHGYKCIVCDLRFKDYSDLQQHLITHTQKQNNSLANSLKTSNMSPEKSQDMISQSSKAKISEPSKVSSEHKSGEHTASQYRKIMDTKKDNGQQKKKDAITKSSLSKEKRKKRIKRINNSNKCSICSKPFEAMTDLAAHIFLHTEKELQQAYKLAKQKLNGTEKYKQTRTEQTANSIKNVNSTVNTADNIIEKTQKVNDKEETLLIRKPNKSLITEDSEIRDTESIIMKENYSQDIELCLPAKSKKDGNKNSFTVCECHNKPGTNENCLQIEIVLLCHTCRVLFRSMKCFETHYRLPQYLKCNQNHLTSGRSPNLFCATCGMIFSSVQDVRHHLEIHARFKKDCTMDFRCNICKVIFLGIGSLFYIHWSKHSRNSFWMASEKSFPKDSIINSKLRKTENSSTQNAMTLSTCVEKYIEVAEHVCYNCKLPFISQDDLKNHISECRKFKSVQNASIVENSNTYLAIRITCNLCDDTFINKKTEFYKHMKDKHNLSTEPRFICTSFTAGNKVFICSVCTAMTKSLDDFEDHWLKHNTTHVYFTCSHCSKIYHNSLNSFIDHAKRHGIDANDVVSCVVSYEQTKFSCKFCNIGFDSPQSMQEHAIIHNTNSQQISPKISQVTNRDSSATVSETDCASNFAKLVELTIEKQMDESLRMKTKKMEKASEICPIESSIDKSRDKLIKILEGNEDDSEHELIIDLTKQSEECNEGLKEEGSKERQTTSNLTLDKSSINQICVMSENNKANALVTNLNIQVSSQNVVKSKIQNVTDSLLTAKNINPQISNSNIKSTNILQTNNVSNHNNLLDIEKKTSDQSITKDIESTRNVEVHDRISIINQEKSTILTKETTEKQSPSRPRQGFLRVKTLAELTGSANLCELSNSAVENANELAKHFKSHHASNKDNNEHKTTEKELVSKQSEINKFIANKKLTIVPNTNSNTLLLSSSNSGNIKLVIQNPVMKPNTTVENNQQPQQFQINTNQKEHSSSLENVTSAYHKNLPACNFVRTTTAMPRFTILKPTKVIAHTANIPNVQRTHVASCSTNENKQKSSSAKKNSSHTVHKCSHCNFVSSNSAEFLMHNLPGNHSTCKKQYLQNDTQAQELNKFDNSETIPTINTIQNNLNPKRCQQTTMKQPGIKYASSSVCDQYSYLAAGTSNNSNQILKQNQPIITNHPITENTTPIYYKNPNPSSGGMSIVINQTTPTVQSIPTIGILQQPAQQQIYQQQVYNESVTIINTPYLHQPQDLVQFSESNAVFQLANQPSVTTYQVRYVCPYCSKSFVSEDYMQIHINEQHNFICNICSLRLYSFSDLNLHKIQHDLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218063;
90% Identity: iTF_00223495;
80% Identity: -