Apun003472.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000956255.1
- Location
- JXXA01001085.1:470-3884[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-108 4.7e-104 347.6 36.6 1 299 98 391 98 392 0.91 2 2 0.04 5.9e+02 -0.8 3.0 210 246 411 446 395 466 0.58
Sequence Information
- Coding Sequence
- ATGACATCATTAGAAAAGGAGCGTACGCCATCACCGTCACGTCTAGCGCTGGCCGGTGATGGTGTCGGTGGTTACTCCAGCCGCAACAGTAGCGTGGGTGACATCTACGAGCTAGCGAGCAGTGACCCGATCGGGGCTTCCTTTCACACTAACGAGCACCCGCACCCGACGGCGCACGGCTACGAACCGCACCGGCAGTACCACCGGCTGTCCGTCTCGCACACCGGCGACGAGTTTAGCTCCGAGGAGGATGAAGCGTTCGTGGAGCTGCTGGAGCGCGCCAGCGATATCGCAGAGGCACGGTTAGCGGCACGACGTCAGGCACGGGCTGAGGCGCGTGAGATACGCATGCGCGAGCTGGAGCGGCAACAGAAAGAGCTGGAGCAGAATGCGGACCGGGTGTtcgatctgcagcagcagtcgaTCGGTCTGTCGGAACCGGCCGGCTTGGCGACGACGGCCCGGTCGAGCCGCATACTGGCCCAGCAGACGTCGGCGACGCGCGGCAGCGCGCTCTCGTCCCGGCGCAACAGTGAAGACTCGCTCGAGGAGGAGGCCCGAAGTCTGCGCGATCTGCGGCTCGAGCTGAAGGATGTTGAGGAACGATTCCGGAAGGCGATGATCGCGAACGCCCAGCTCGATAACGAGCGCGCCTCGTTCAACTACCACATCCAGCTGCTGAAGGACAagctggaggaggtggaggaatCGCACGCCCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGACGCGCTCAAGCGCAACAACGACAAGCTGACCGAGGAGCTGAAGCTGGTGCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATCGTGACGGTCGAGAACGAGGACGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGACAACGCGCAACTGCTCAAATCCGTGCCCGGTTCGCTAGACGTAAGACTGAAAAAGTTTGCGGCCGAAAAGCAGGAACTGCAGACGGAACTGCAaacgctgcagcagcagctgaacgACGTCAAAAGCAAGGGCAGACGGTACACGACCATGAACGGTTCGCTCGCTGATGACGATTACGAGGACGCGCAGCGAGAAGCCAACAAGCTGATCACGGAGTATAAGTACAAGCTGCAGAAGGCGGAACAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAAGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAAGCGGAGAGTGATCTGAAGATCGAGCGGCGGAAGCTGCAGCGTGAGAACCGTGAAGCCATGGATCGCCTGGAGGAGCTAGAAACGTCAAATAATCATCTGCTGAAGCGGCTAGACAAGCTTAAAAACGTCAAGAGCACCCTGCTGAAAGATATATGA
- Protein Sequence
- MTSLEKERTPSPSRLALAGDGVGGYSSRNSSVGDIYELASSDPIGASFHTNEHPHPTAHGYEPHRQYHRLSVSHTGDEFSSEEDEAFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSIGLSEPAGLATTARSSRILAQQTSATRGSALSSRRNSEDSLEEEARSLRDLRLELKDVEERFRKAMIANAQLDNERASFNYHIQLLKDKLEEVEESHAQLQREYREKCRDRDALKRNNDKLTEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQTLQQQLNDVKSKGRRYTTMNGSLADDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTLLKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00103010; iTF_00108388; iTF_00100303; iTF_00098997; iTF_00103670; iTF_00100953; iTF_00095072; iTF_00097770;
- 90% Identity
- iTF_00098997;
- 80% Identity
- -