Achr003504.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000349165.1
- Location
- KB690758:3893-7996[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.028 3e+02 -0.3 0.9 67 88 87 116 53 142 0.53 2 3 1.3e-108 1.4e-104 348.9 36.8 1 299 167 459 167 460 0.94 3 3 0.043 4.7e+02 -0.9 2.7 210 246 479 514 463 533 0.60
Sequence Information
- Coding Sequence
- ATGCAGAGCTACATCGAATCTTCCATCCATCCCGTGACGGTTGACTGTCAACCGAACGGTGGTGGTGGTGGGCTAAAGAGTAATGCCAGTAGCGTGGGTGACATTTACGTGCTAGCGAACAGCGAGCTGGCGTTGGAGTCGCACGAGTTAATCGGACCCTGCCACCAGAAGCTCGAGCAACAACCAGCGCTCGACGTCAATCGGAACACGGTGGTGGACCGTTACTATTCCTGCACTACTAACGCTAGTGGTTCGTCTTCACCCGAGCAGGGACCGCGCGGTGCCAGCCGCAACAGTAGCAGCGTCCGGAGCGAGAGCTACCACGATTCGTCCTCGCTGCAGGATCCGGACGATACGGCAACgcatcagcagcatcagcagcaCGGTTACGAAGCGCACCGGCAGTTCCATCGGCTATCGGTTTCGCACACCGGCGACGAGTTTAGCTCCGAGGAGGATGAAGCGTTCGTGGAGCTGCTCGAGCGGGCCAGTGATATTGCCGAAGCGCGATTAGCGGCAAGGCGTCAGGCACGTGCGGAGGCCCGGGAAATTCGTATGCGCGAACTGGAGCGGCAACAGAAAGAGCTGGAGCAGACGGCGGACCGGGTGTTCGATCTGCAACAGCAATCGATCGGGCTGTCCGAACCAGCCAATCTGGTCGCAACACCCCGGTCTAGCCGTATCCTGGCCCAGAATGCGGTCACCCGCGGCAGTGCCCTGTCGTCCCGCCGCAACAGTGAAGATTCGCTCGAGGAGGAGGCACGCAGTCTGCGCGATCTACGGCATGAGCTGAAGGACGTGGAGGAACGCTTCCGCAAGGCGATGATTGCGAACGCACAGCTAGACAACGAACGATCCTCGCTCAACTATCAGATACAGCTGCTGAAGGACAAGCTGGAGGAGGTAGAGGAGTCGCACTCCCAGCTGCAGCGCGAATATCGGGAGAAGTGTCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGTTGAGCGAGGAGCTGAAGCTTGTCCAGGGCCAGCTGCAGGAGCGGGACGCATTGATCGAGCAGCACGGACTGGTAATAGTAACGGTGGAAAATGAAGACGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCACAACTGCTCAAATCCGTACCCGGTTCACTAGACGTAAGACTGAAAAAGTTTGCGACTGAAAAGCAGGAGCTACAGACGGAACTGCAGTCACTGCAGCAACAGCTGAACGATATTAAGAGCAAGGGCAGGCGGTACACCTCCATGAACGGTTCGCTTGTCGATGACGATTACGAGGATGCGCAGCGGGAAGCCAACAAGCTGATCACGGAGTATAAGTACAAGCTGCAAAAGGCGGAGCAAGAAATTGCCAACCTGCAGGCCAGTCTTGCCCGCTCTGAAACGCAGGTGATTCGGTACAAGAGCACTGCCGAGGCGGCCGAGAAGGCCGAGAGTGACCTGAAGATTGAGCGAAGGAAGCTGCAGCGTGAGAATCGTGAAGCGATGGACCGGCTGGAGGAGCTAGAAACGTCAAATAACCATCTGCTGAAGCGGCTAGACAAGCTTAAGAACGTCAAGAGCACCATACTAAAGGACATATGA
- Protein Sequence
- MQSYIESSIHPVTVDCQPNGGGGGLKSNASSVGDIYVLANSELALESHELIGPCHQKLEQQPALDVNRNTVVDRYYSCTTNASGSSSPEQGPRGASRNSSSVRSESYHDSSSLQDPDDTATHQQHQQHGYEAHRQFHRLSVSHTGDEFSSEEDEAFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPANLVATPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFATEKQELQTELQSLQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- iTF_00098997;
- 80% Identity
- -