Afon009796.1
Basic Information
- Insect
- Anopheles fontenillei
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_008817895.1
- Location
- VTWG01001119.1:58018-63052[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-109 1.4e-104 349.4 36.6 1 299 144 438 144 439 0.95 2 2 0.043 6.4e+02 -0.9 2.8 210 246 458 493 442 512 0.60
Sequence Information
- Coding Sequence
- atgcAACGCTACATCGAATCCATCACGGTCGACTGTGGCGGCATCGTCGGGCACAAGAGCAACGCCAGCAGTGTGGGCGACATTTACGAGCTGGCAAACAGTGAGCTGCCGCTGTGCGAGTACTCCTGCACGGCTGGCGACGACGCGCCCGACTGTGGTAgtgatggtgctgatgatggttcGTCTTCACCCGAGCAGGGCAGCAGCATCCGGAGCGACAGCTACCACGATTCGTCCTCGCTGCAGGACCCGGACGATGGGGGGGCGGCGatcatccagcagcagcagcagcagcagcagcagtaccagcacGGCGGCTACGAACCGCACCGGCAGTACCATCGGCTGTCCGTGTCGCACACCGGCGACGAGTTCAGCTCCGAGGAGGATGAAGCGTTCGtcgagctgctcgagcggGCCAGCGACATTGCCGAGGCACGATTAGCGGCACGGCGCCAGGCCCGTGCGGAGGCCCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGAAGGAGCTGGAGCAGACGGCGGACCGGGTGTTcgacctgcagcagcagtcgaTCGGGCTGTCCGAGCCGGCGACCGCGCTGGTCGCGACGACGCCCCGGTCGAGCCGCATCCTGGCGCAGAATGCGGTGACGCGCGGCAGCGCCCTGTCGTCGCGCCGGAACAGCGAGGACTCGCTGGAGGAGGAAGCCCGCAGCCTGCGCGACCTACGGCACGAGCTGAAGGATGTGGAGGAGCGCTTCCGGAAGGCGATGATTGCGAACGCCCAGCTCGACAACGAGCGGTCCTCGCTCAACTACCAGATACAGCTGCTGAAGGACAAgctggaggaggtggaggagtcCCACTCGCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTCGTCCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATAGTCACGGTGGAGAACGAGGACGGTACCGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCGCAGCTGCTCAAATCCGTGCCCGGTTCCCTTGACGTAAGACTGAAAAAGTTTGCGGCCGAAAAGCAGGAGCTGCAGACGGAGCTGCAgtcgctgcagcagcagctgaacgATATTAAGAGCAAGGGCCGGCGGTACACCTCCATGAACGGTTCGCTCGTCGATGACGATTACGAGGATGCGCAGCGCGAAGCCAACAAGCTGATCACCGAGTATAAATACAAGCTGCAGAAGGCGGAGCAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAGGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAGGCCGAGAGCGATCTGAAGATCGAGCGAAGAAAGCTGCAGCGCGAGAACCGTGAAGCGATGGACCGGCTGGAGGAGCTAGAAACGTCAAACAATCATCTGCTGAAGCGGCTAGACAAGCTTAAGAACGTCAAGAGCAACATCCTGAAGGACATATGA
- Protein Sequence
- MQRYIESITVDCGGIVGHKSNASSVGDIYELANSELPLCEYSCTAGDDAPDCGSDGADDGSSSPEQGSSIRSDSYHDSSSLQDPDDGGAAIIQQQQQQQQQYQHGGYEPHRQYHRLSVSHTGDEFSSEEDEAFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPATALVATTPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQSLQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSNILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- iTF_00098997;
- 80% Identity
- -