Akol010371.1
Basic Information
- Insect
- Anopheles koliensis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000956275.1
- Location
- JXXB01028195.1:711-4184[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 4.2e+03 -3.3 0.3 60 88 57 85 43 89 0.63 2 3 2e-108 3.5e-104 348.3 35.5 1 299 131 424 131 425 0.91 3 3 0.043 7.7e+02 -0.9 3.0 210 246 444 479 428 499 0.58
Sequence Information
- Coding Sequence
- ATGACATCACTAGAAACGGAGCGTACGCCAACACCAACACGGCTAGCGGTGGCCGATGATGGTGCCGGCAGCGGTTACTCCAGCCGCGACAGCAGCGTGGGTGACATCTACGAGCTAGCGAGCAGTGACCCGATCGGGGCTTCGTTTCTCACTAACGTCAGTGGTTCGTCTTCGCCCGATCAGCAGCACCCGAGCCGCAACAGTGGCAGCGCCCGGAGTGACAGCTACCACGACTCGTCATCGCTGCAGGACCACCCGCACCCGACGACGGCCCACGGCTACGAACCGCACCGGCAGTACCACCGGCTGTCCGTCTCGCACACCGGCGACGAGTTTAGCTCCGAGGAGGATGAAGCGTTCGTGGAGCTGCTGGAGCGCGCCAGCGATATCGCGGAGGCACGGTTAGCGGCACGACGTCAGGCACGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAACAGAAAGAGCTGGAGCAGAATGCGGACCGGGTGTTcgatctgcagcagcagtcgaTCGGTCTGTCGGAACCGGCCGGTTTGGTGACGACGCCCCGGTCGAGCCGCATGCTGGCCCAGCAGACGTCGGCGACGCGCGGCAGCGCGCTCTCGTCCCGGCGCAACAGTGAAGACTCGCTCGAGGAGGAGGCCCGAAGTCTGCGCGATCTGCGGCTCGAGCTGAAGGATGTTGAGGAACGGTTCCGGAAGGCGATGATCGCGAACGCCCAGCTCGATAACGAGCGCGCCTCGTTCAACTACCACATCCAGCTGCTGAAGGACAagctggaggaggtggaggaatCACACGCCCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGACGCGCTCAAGCGCAACAACGACAAGCTGACCGAGGAGCTGAAGCTGGTGCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATCGTGACGGTCGAGAACGAGGACGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGACAACGCGCAACTGCTCAAATCCGTGCCCGGTTCGCTAGACGTAAGACTGAAAAAGTTTGCGGCCGAAAAGCAGGAGCTGCAGACGGAACTGCaaacgctgcagcagcagctgaacgaCGTCAAAAGCAAGGGCAGGCGGTACACGTCCATGAACGGTTCGCTCGCGGATGACGATTACGAGGACGCGCAGCGGGAAGCCAACAAGCTGATCACGGAGTATAAGTACAAGCTGCAGAAGGCGGAACAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAAGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAAGCGGAGAGTGATCTGAAGATCGAGCGGCGGAAGCTGCAGCGTGAGAACCGTGAAGCCATGGATCGCCTGGAGGAGCTAGAAACGTCAAATAATCATCTGCTGAAGCGGCTAGACAAGCTCAAAAACGTCAAGAGCACCCTGCTGAAAGATATATGA
- Protein Sequence
- MTSLETERTPTPTRLAVADDGAGSGYSSRDSSVGDIYELASSDPIGASFLTNVSGSSSPDQQHPSRNSGSARSDSYHDSSSLQDHPHPTTAHGYEPHRQYHRLSVSHTGDEFSSEEDEAFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSIGLSEPAGLVTTPRSSRMLAQQTSATRGSALSSRRNSEDSLEEEARSLRDLRLELKDVEERFRKAMIANAQLDNERASFNYHIQLLKDKLEEVEESHAQLQREYREKCRDRDALKRNNDKLTEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQTLQQQLNDVKSKGRRYTSMNGSLADDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTLLKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- iTF_00098997;
- 80% Identity
- -