Amac007885.1
Basic Information
- Insect
- Anopheles maculipalpis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_943734865.1
- Location
- CALSEK010000126.1:610893-618791[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-108 1.6e-103 346.0 37.7 1 299 180 472 180 473 0.93 2 2 0.049 7.8e+02 -1.1 3.0 210 247 492 528 476 547 0.59
Sequence Information
- Coding Sequence
- ATGGATTGCCATCCAGTTGTGTGGACCGGTACGGTACTACCGTGCACCAGCAGATCAAACCATTCCACCGTTGAGGCTGCGCTCAAAAGCAGCAGCAGCAGCGTAGAGGACATTTACGAGCTAGCAAATACTGAACTCTTGCCGGAGTCGATCGAGAAGGGCGATCGCTCGCTGCAGAAACTGTACGAGCTGAGCGCGCTCGATCTGAACCGGAACAAGATACCAGCCCCGCCGGATGGGGATGATTTCTTCCACTGCCCTACTAATGACGCGAGTGGTTCGTCTTCACCCGAGCAGCAACCGCCACGGGACACGAGCCGGAACAGTGGGAGCGTCCGGAGCGATAGCTACTACCACGACTCGTCCTCCGTGCCGGATCCGGACAGCGCACAGCAGCAGTACGGGGGTGCCCATACGCTGCACGGGTACGAGCCGCACCGGCAGCTTCATCGGCTGTCGGTATCGCACACCGGGGACGAGTTTAGTTCCGAGGAGGATGAAGCGTTTGTGGAGCTGCTCGAACGCGCCAACGACATCGCCGAGGCGCGATTAGCAGCGAGACGACAAGCACGTGCCGAGGCACGCGAAATACGTATGCGCGAACTGGAGCGGCAACAGAAAGAGCAGGAACAAACGGCAGATCGTGTGTTCGATCTGCAGCAGCAATCGATCGGTCTGTCCGAACCGGCCAACCTGGTGGCCACACCACGCACCAGCCGGATGATGGCACAGAGCGCAATGACGCGGGGCAGTGCCCTATCGTCCCGGCGTAATAGTGAGGATTCGCTCGAGGAGGAAGCCCGCAGTCTGCGCGATCTTCGACACGAGCTGAAGGACGTTGAGGAGCGTTTCCGCAAGGCGATGATTGCGAACGCCCAGCTAGACAACGAACGATCCTCGCTGAACTATCAAATACAGCTGCTGAAGGACAAGCTGGAAGAGGTGGAAGAGTCCCATTCGCAGCTGCAGCGCGAGTATCGGGAGAAGTGTCGCGACCGGGAAGCACTGAAGCGCAACAACGACAAGCTCAGCGAGGAGCTGAAGCTCGTCCAGGGTCAGCTGCAGGAGCGCGATGCACTGATAGAGCAGTACGGACTGGTGATAGTAACGGTAGAGAACGAAGATGGTACGGATGCGCACCGTGCCCTAGTCACAGCGGATAACGCCCAGCTGCTCAAATCTGTTCCCGGCACATTAGACGTAAGACTGAAGAAGTTTGCGGCCGAAAAGCAGGAACTGCAAACCGAACTGCAGGCCCTCCAGCAGCAGCTGAACGATATCAAGAGCAAGGGCAGACGGTACACCTCCATGAACGGTTCGCTGGTCGACGATGACTATGAAGATGCGCAGCGGGAAGCTAACAAGCTGATCACGGAGTATAAGTACAAGCTGCAGAAAGCGGAGCAGGAGATCGCCAACCTGCAGGCTAGTCTGGCGCGCTCGGAAACGCAGGTGATCCGATACAAAAGTACGGCCGAGGCGGCAGAGAAAGCGGAAAGCGATCTTAAGATCGAACGAAGAAAGCTGCAACGTGAGAACCGTGAAGCCATGGATCGGCTGGAGGAGCTAGAAACATCGAACAACCATCTGCTGAAGCGGCTAGATAAGCTTAAGAACGTCAAGAGCACCATCATGAAGGAAATATGA
- Protein Sequence
- MDCHPVVWTGTVLPCTSRSNHSTVEAALKSSSSSVEDIYELANTELLPESIEKGDRSLQKLYELSALDLNRNKIPAPPDGDDFFHCPTNDASGSSSPEQQPPRDTSRNSGSVRSDSYYHDSSSVPDPDSAQQQYGGAHTLHGYEPHRQLHRLSVSHTGDEFSSEEDEAFVELLERANDIAEARLAARRQARAEAREIRMRELERQQKEQEQTADRVFDLQQQSIGLSEPANLVATPRTSRMMAQSAMTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQYGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGTLDVRLKKFAAEKQELQTELQALQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTIMKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- iTF_00098997;
- 80% Identity
- -