Acul011934.1
Basic Information
- Insect
- Anopheles culicifacies
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000473375.1
- Location
- KI425067:2574-9743[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-108 3.1e-104 348.2 36.4 1 299 237 529 237 530 0.94 2 2 0.053 7.6e+02 -1.2 2.8 210 246 549 584 533 603 0.60
Sequence Information
- Coding Sequence
- ATGGTGCAGCTTAAGCCGCAGCAAAACTCGCTCGCCAGCAAACTGGTGGTGCAGCATCAGTATGGACCGTCGCTAAGCGATTGTCTCGAGCTGGAAGCTGCCGGTCAACCGAAAGGCCTAGCCGTCAAGGGAACGTGGCGCTACGTGAGTAACACTGTGCGGTTGGCAACGAGGTCGTCCGAGATGGATAGCAATAACAGTGTGTTGAACGGTGCCGAACATACTGCTGGGGCATCTTCCAATAATGGTGCTGCCCTCAGTGATGGTGTTTCCAAGAGCGATACCAGTAGTGAGGGAGACATTTATGAGCTAGCCCAAAGTGAACTGACGTTGGGGTCGCTCGAGGGTGACACCTCGATGCAGAAAATTCTCGACCGCTCAGCACTCGAAGGGGGAAACCGGAACCTGGTTCCGGTTCCGGCGGATGTGGAACATTATATCGCCCGCACTAACGCCAGTGATACGTCTTCACCCGAGCAGCTGCCCCGGGATGCGAGTCGCAACAGCAGCAGTGTTCACAGCGACAGCTTCCATGACGCATCCTCGCAACCGGATCCAGAAATTCTTCGCCAACATGGATCCCATCCGCTGTACAGCTACGAACCACCCCGCCAGTTTCATCGACTATCGGTTTCACACACCGGCGACGAGTTTAGTTCCGAGGAGGACGAATCGTTTGTGGAGCTGCTCGAGCGCGCTAGTGACATTGCCGAGGCGCGATTAGCAGCTAGGCGTCAGGCACGTGCAGAGGCTCGCGAAATACGCATGCGAGAACTGGAGCGACAACAGAAAGAGCTGGAGCAAACAGCCGACCGGGTGTTTGATCTGCAGCAGCAGTCGATCGGTTTGTCCGAACCAGCCAACATGGTTGCCACACCCCGCACGAGCCGCATACTGGCCCAAAACGCAGTGACGCGCGGCAGTGCCCTATCGTCCCGCCGTAACAGTGAGGATTCCTTAGAGGAGGAAGCACGTAGCCTACGGGATCTTCGGCATGAGCTGAAGGACGTGGAGGAGCGTTTCCGCAAGGCGATGATTGCGAACGCTCAGTTAGACAATGAACGGTCCTCGCTTAACTATCAAATTCAGCTGCTGAAGGACAAGCTAGAGGAGGTGGAAGAGTCGCACTCGCAACTGCAGCGAGAGTATCGGGAAAAATGTCGCGACCGGGAAGCGCTGAAGCGTAACAACGACAAACTCAGCGAAGAGCTGAAGCTCGTGCAGGGCCAGCTTCAGGAGCGTGATGCACTGATAGAGCAGCACGGACTAGTTATAGTAACGGTAGAGAATGAGGATGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCACAACTGCTCAAATCTGTTCCCGGCTCATTAGACGTAAGACTGAAGAAGTTTGCAGCCGAAAAGCACGAGCTGCAGACCGAACTGCAGGCACTGCAGCAACAGCTAAACGATATCAAGAGCAAGGGCAGACGATACACTTCCATGAATGGTTCGCTCGTCGATGACGACTATGAAGATGCGCAACGGGAAGCTAACAAGCTGATCACGGAGTATAAATACAAGCTGCAGAAGGCGGAGCAAGAGATCGCAAACCTGCAGGCTAGTCTGGCACGCTCGGAAACGCAGGTGATCCGATACAAGAGCACGGCCGAGGCGGCAGAGAAAGCGGAAAGCGATCTTAAGATTGAGCGACGAAAGCTGCAACGCGAGAACCGCGAAGCTATGGATCGTTTGGAGGAGCTAGAAACATCGAACAACCATCTGCTGAAGCGGCTAGACAAGCTTAAGAACGTCAAGAGCAACATACTGAAGGACATATGA
- Protein Sequence
- MVQLKPQQNSLASKLVVQHQYGPSLSDCLELEAAGQPKGLAVKGTWRYVSNTVRLATRSSEMDSNNSVLNGAEHTAGASSNNGAALSDGVSKSDTSSEGDIYELAQSELTLGSLEGDTSMQKILDRSALEGGNRNLVPVPADVEHYIARTNASDTSSPEQLPRDASRNSSSVHSDSFHDASSQPDPEILRQHGSHPLYSYEPPRQFHRLSVSHTGDEFSSEEDESFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPANMVATPRTSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKHELQTELQALQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSNILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- -
- 80% Identity
- -