Adir006508.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_000349145.1
- Location
- KB673079.1:109087-120981[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.12 1.5e+03 -2.4 0.5 64 87 34 57 14 70 0.56 2 3 1.3e-109 1.6e-105 352.2 35.2 1 299 102 394 102 395 0.93 3 3 0.039 4.7e+02 -0.7 2.8 210 246 414 449 398 468 0.60
Sequence Information
- Coding Sequence
- ATGGAGAGCCCGAGTGCCGGTGGGAGACGCCGCGGCAATTCGCGCATCAATGCCGAAGATCAAGCGTTAGATCAGATCGCAAAAGAGCAGCTGGGACGGCGCGAGAGTTCGAGCCGGAACAGTGGCAGCGTCCGGAGCGACAGCTACCACGACTCGTCATCGCTGCAGGAGCACCATCCGACAGCGCATGGCTACGAACCGCACCGCCAGTACCATCGGCTGTCCGTCTCGCACACCGGCGACGAGTTTAGCTCCGAGGAGGACGAAGCGTTcgtggagctgctggagcgcgCCAGCGATATCGCCGAGGCACGGTTAGCGGCGAGACGTCAGGCACGGGCCGAGGCGCGTGAGATACGCATGCGCGAGCTGGAGCGCCAACagaaggagctggagcagaATGCGGACAGAGTGTTcgacctgcagcagcagtcgatCGGTCTGTCGGAGCCGGCCGGACTGGTAGCGACGCCACGGTCGAGCCGCATGCTGGCACAGAGCACGGCAACGCGGGGAAGTGCCCTCTCCTCGCGGCGCAACAGCGAAGACTCCCTCGAGGAGGAGGCCCGCAGTCTGCGCGATCTGCGACACGAGCTGAAGGACGTCGAGGAACGCTTCCGGAAGGCGATGATCGCGAACGCCCAGCTCGACAACGAACGGTCCTCGTTCAACTACCACATCCAGCTGCTGAAGGACAAGCTGGAGGAGGTTGAGGAGTCGCACGCCCAGCTGCAGCGCGAGTACCGCGAGAAGTGCCGCGACCGCGATGCGCTCAAACGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTGGTGCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTAATAGTGACGGTCGAGAACGAGGACGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGACAACGCACAACTGCTCAAATCGGTACCCGGCTCGCTAGACGTAAGACTGAAAAAGTTCGCGGCCGAAAAGCAGGAGCTGCAGACCGAACTGCAaaccctgcagcagcagctgaacgaCATCAAAAGCAAGGGCCGGCGGTACACGTCCATGAACGGGACGCTCGCGGACGACGACTACGAAGACGCGCAGCGTGAGGCCAACAAGCTGATCACGGAGTATAAATACAAGCTGCAGAAGGCGGAACAGGAGATCGCGAACCTGCAGGCGAGCCTGGCGCGCTCGGAAACGCAGGTTATCCGGTACAAGAGCACGGCGGAAGCGGCCGAGAAGGCGGAGAGCGATCTCAAGATCGAGCGGCGGAAGCTGCAGCGCGAGAACCGTGAAGCCATGGACCGTCTGGAGGAGCTAGAAACTTCAAATAACCATCTGCTGAAGCGGCTAGATAAGCTTAAAAACGTCAAGAGCAACATACTGAAAGATATATGA
- Protein Sequence
- MESPSAGGRRRGNSRINAEDQALDQIAKEQLGRRESSSRNSGSVRSDSYHDSSSLQEHHPTAHGYEPHRQYHRLSVSHTGDEFSSEEDEAFVELLERASDIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSIGLSEPAGLVATPRSSRMLAQSTATRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSFNYHIQLLKDKLEEVEESHAQLQREYREKCRDRDALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQTLQQQLNDIKSKGRRYTSMNGTLADDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSNILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106400;
- 90% Identity
- iTF_00103670; iTF_00095072; iTF_00108388; iTF_00100303; iTF_00103010; iTF_00100953; iTF_00106400;
- 80% Identity
- -