Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000956255.1
Location
JXXA01012088.1:14208-19501[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-25 3.2e-22 78.4 0.0 2 89 210 293 209 293 0.94
2 2 4.7 1e+04 -3.3 0.0 7 42 1009 1046 1005 1052 0.76

Sequence Information

Coding Sequence
ATGAAAACTAAATCCAGGAACTCTTTAACGAACGGCAGTGGTAATAGTAgtagtggcagtggcagcgatAATTATGCCAACGGCAGCTCCTATGGACCCGCTGGAACAGCAATGGCCGGAGCAGGAGGGCCGGCTAGCGCCTCCGCTGGGTCCATGAATGGCAAGCATCAGCACTCCAGTGCTGGTGGTGCGGGAAATATTCATGGCGGATCTACATCTTCCGGCGATCCCGGTGCATCCGGACTGGGTGTTGATTATGACaatcatcagcaccagcagcagcagcaggagcagccgCTGAACAACCACCATAGCCATCAAAATAATCGCAACCATCTGTATCAGCAGCAAAAGCTGGGTAGCAACCGACCGCATATATCGCTGGACAAATGCGacgattttcaattcaatgtaCCACCGGAAGCTCCTGTTTTCAAGCCGTCGGAggaagattttaaaaatcctCTCGTCTACATCAACAAAATACGCCCGATGGCAGAAAAGTATGGAATTTGCAAGATTCGGCCACCAAGCTCCTGGCAGCCTCCCTTCACCGTGGATGTAGAAAAACTAACCTTTACACCACGCATCCAGCGGCTGAACGAACTGGAGGCGGAAACACGAATCAAACTGAACTTTCTCGATCAGATTGCAAAATTCTGCGAACTACAAGGCACGACCCTCAAGATTCCAATGGTAGAACGGAAGCCGCTCGATCTCTACACACTGCATAAGATCGTCAACCAGGAGGGTGGTCTGGAGGTGGTGACAAAAGAACGCAAATGGTCGAAGATAGCGTGTCGTATGGGCTACCAGCAGGGCAAGAGCGTTGGATCTAATTTACGCGCACACTATGATCGGCTGTTGTATCCATTCGACTTGTATCGCTCGGGAAAGGTAGTCGATTGGGCCAATATTGAACCGGAACCATCGGAGGACTGCGAGTACGAACCGCATTGCATCGAGTCGAGACAGCAAGTACAACCTCCGATGGCAGTTACGGCTCGTCGCTCACAACGCTTCGCTCAgcagcagaacaacaacagcaaaccatCGTCAACGGCTGGCAGTAGTGCTGGTGGAAGTGTTCGCGGATCATCGGATGAAATGTCGCCCGGAAAAAAGGAGCTGCGGCACAGGAACATGCTCGAGTTTGCCAGTAAATTCGCCACCGCAGCACGAGATCAAGCGGCAGCGGCTGCGGCCTCGACTAATGGTGCAGGGTCGAAGGACGAAAAGAGTGCCGGTGCGGGTGCAGGAGGAACACATGGTTACGATCCAATGGCAAAGTACATCTGCCATATGTGCAATCGGGGCGACGTCGAGGAGTCGATGCTGCTGTGCGATGGGTGCGATGCGTCCTACCACACATTTTGTCTGATGCCACCATTGCAGGACATTCCGAAGGGCGACTGGCGTTGCCCGAAGTGTATCGTCGAGGAGAATTCGAAACCGGTGGACGCATTCGGCTTCGAACAGGCGCAACGCGAGTACACGCTGCAACAGTTTGGCGAGATGGCGGATCAGTTTAAATCGAACTACTTCAACATGCCGGTCCATCTCGTTCCGACAAAGTTGGTTGAGAAAGAATTTTGGCGCATCGTTTCATCTATCGACGAGGACGTCACCGTCGAGTACGGTGCCGATCTGCACACAATGGACCATGGCAGTGGCTTTCCGACGAAGTCCTCGCCGTATCTTACGCCGAGCGACCAGGAGTACGCTGAATCGTGCTGGAACCTCAACAATCTTCCCGTGTTGGATGAATCCATACTTGGTCACATCAACGCGGACATCAGCGGCATGAAGGTGCCGTGGATGTACGTCGGCATGTGCTTTGCCACCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATCTGCATTGGGGCGAACCTAAGACGTGGTACGGTGTGCCCGGCAGCCGAGCGGAAGACTTCGAGCTGGCCATGAAATCGGCTGCCCCGGAGCTGTTCCACTCGCAGCCGGATTTGCTTCACCAGCTGGTGACGATTATGAACCCGAACATTCTGATGAACGCTAACGTGCCCGTCTTTCGCACGGATCAGCATGCGGGCGAGTTTGTGGTGACATTCCCGCGGGCGTACCATGCCGGCTTCAATCAGGGTTACAACTTTGCCGAGGCGGTCAATTTTGCACCGGCCGACTGGATGAAGATGGGCCGGGAATGTGTCAATCACTACTCGAAGCTGCGGCGTTACTGTGTCTTTTCGCATGATGAGCTCGTTTGCAAGATGGCGCTCGAGCCGGACAGGCTGAATTTGGGCATCGCAACGGCGTGCTACATCGATATGGCGGAGATGGTGGACACGGAGAAGAAGCTGCGGAAGAATCTTCTAGAATGGGGAGTTTCAAATGCCGAACGGGAAGCGTTCGAACTGCTGACGGATGATGCGAGACAGTGCgaaatttgcaaaaccacTTGCTTCCTTTCCGCGGTCAACTGCAAGTGCACCAAGAACCTGGCTTGCCTGCGCCATTTCGCCGAGTTGTGCGAATGTCCGCCCGAAAACCACACCCTGAAGTATCGGTACACGCTGGACGAGCTACCGTTGATGGTACAGAAGCTGAAGGTGAAGGCGGAATCGTTCGAAAAGTGGCTGTTTCGTGTGCGTGACGTGCTGGATCCATCCGTCGCCAGCAGCATTACGCTCGAGGAGCTGCAAAGTATCGCCCACGAGGCGGAGAGTCAAAAGTTTCCCAACAGCGTCATACTGGAGCGCTTGAATCTGTCCATACTGGAGGCGCAGAAGTGCATCACGGTCATACAGCAGCTCGACATAAACAAGATCCGTACGCGCACACGCAACTCGTTGGAGTGCGCCAAGTACAAGTTGACGATGGACGAGCTGGAGCTGTTCATCAACGAGATTAACAATCTGCGGTGCGTTATCCGCGAGGGCGACAGTGTGCGGGAGCTGCAGCGCATCGGGCAGGACTGGCTGCGGCAGGGGGACAAAGCCTTGAACTTACGATTCAAGGACACGAACGTGCAACAGCTCAATCAGCTAATCGATGAGGGCAACGCGCTCTGCATCGAGCTGCCGCAGATTACGGAGCTGAAGGAACGGCTGACGCAGTACAAATGGTACCGAGAGGTGCGAACGTTGCGCGAATACACGGTCGACCGTATGTCGCTGGAGGACATTAAGAAGCTCATCAACGAGGGCATGCGAATACTACCGCACACAGTATTAGAGAAAGAGCTGTCACAGTTGCACGGAATTATGTTGCAGATTGTGGATTGGGAGCAGTCGGCGAACCAGTGTTTCAAAACGGAAACGCAACATAAGATCAGTGAAATCGACAATCTGCTGGAGCGAGCGCAAAACATCGAAGCGTTCCTGCCCCTGGCCGGTCAGCTGAAGGACGCACTGCACAAGTCGAAGGAGTGGTTGCACGCGATCGAAACGCTggagagcagcaaaaactacaactttttccacacactcCAAAACCTGGCCAACCGTGCgaagctgctgccggtcgAAATGGAGAGCAAGTTGCTGTGCGAGACGATATTcggcacgacgacgacgaacacgacgacgacgacgacgacgggcggCGGTTGCTACAATCGTACCGGCGGTCAGACGCTGCTGTTCAATTCCGTGGGCTTTATCGGTGCGAGTGGTGACGATTGGCGCGGCAAAGCTGCCTCCACACCGTCGACTTCGctgaagcgaaagcgaaacggatCCATAACAAGCCTGGACGATCCGGTGCTTCCGGCCAGTGGCATAGAAACCATTATGAAGAAGATCAAAGAGGATAATGGCATTGGGGAGCAGGATAAACGGCTGCTGCGTGCGAAACTGCTGCTGGACTGGAACGAATCGGAACAGGGCAGTGACAAACATATGCTCGGCAGGTACGGCAGCATTCAGggctcgcagcagcagcagcaacagcagcaggagcaacgAAACCGATCAAATAATAGCTGCGACGTGGTATACCACTGCGCCAAGTGCTACGAGATGGTGGCGAAAGCGAATGTTTTGCGAAAATATCGCCATaaacagcatcaccatcactgTCGGCATCACGAAAAGCACAGTCGTGTCGTTGCGAAGGAGGAACCAACCCATCCGCAACCGGCGACCGGTAACAGTGGCAGCCTATCGTCCTTGGAACAGTTGCTGCAGATCAAAACTCTTACCGAGGAAGATTTTCGGCTTGAATGTGGCGCCATTGAGGGTGGCAGTAGTTTCGACGATTTTTCGCTCAAATTCGGTGACCATTATGATGGGGAGGATGAACCGGAGGACGAAGAGGTTGCCGATGAGCCGATGAAAGCGGAAGAAGATGAGGAAGATGAGGAAGCGGAGGCTACCGCCGGATCGGTCGGGCAGCTCGGACGGAATGGGTGCCATGGTTGCAAACCACCAGAACCGGCGCATGAACGAGGCCAGCTACCAGCAACTATTACCTGCACTGGCGAGAAAGTGGAAGCAAGATCACGGAACAGTGCAAAAAGCGTTGCCGGTGGCGGCGTAGGTGCAACCGTGACCGGTGTTTGCACCACCGAGAGTACTAGTCAATTGTCGGAAGTGCCCTCCGGGAACGCTGGAAGTCGGCATTCCAATGGGAGCGGCACCGGTACCTCTACAAATGCCACCGCATCGCTGCACGAACACCAACAGACGACCAACCAAAAGCACACGGATAACTTATGA
Protein Sequence
MKTKSRNSLTNGSGNSSSGSGSDNYANGSSYGPAGTAMAGAGGPASASAGSMNGKHQHSSAGGAGNIHGGSTSSGDPGASGLGVDYDNHQHQQQQQEQPLNNHHSHQNNRNHLYQQQKLGSNRPHISLDKCDDFQFNVPPEAPVFKPSEEDFKNPLVYINKIRPMAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKIACRMGYQQGKSVGSNLRAHYDRLLYPFDLYRSGKVVDWANIEPEPSEDCEYEPHCIESRQQVQPPMAVTARRSQRFAQQQNNNSKPSSTAGSSAGGSVRGSSDEMSPGKKELRHRNMLEFASKFATAARDQAAAAAASTNGAGSKDEKSAGAGAGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVDAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTKLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSPYLTPSDQEYAESCWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNANVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINNLRCVIREGDSVRELQRIGQDWLRQGDKALNLRFKDTNVQQLNQLIDEGNALCIELPQITELKERLTQYKWYREVRTLREYTVDRMSLEDIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDNLLERAQNIEAFLPLAGQLKDALHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTTNTTTTTTTGGGCYNRTGGQTLLFNSVGFIGASGDDWRGKAASTPSTSLKRKRNGSITSLDDPVLPASGIETIMKKIKEDNGIGEQDKRLLRAKLLLDWNESEQGSDKHMLGRYGSIQGSQQQQQQQQEQRNRSNNSCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHEKHSRVVAKEEPTHPQPATGNSGSLSSLEQLLQIKTLTEEDFRLECGAIEGGSSFDDFSLKFGDHYDGEDEPEDEEVADEPMKAEEDEEDEEAEATAGSVGQLGRNGCHGCKPPEPAHERGQLPATITCTGEKVEARSRNSAKSVAGGGVGATVTGVCTTESTSQLSEVPSGNAGSRHSNGSGTGTSTNATASLHEHQQTTNQKHTDNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2