Basic Information

Gene Symbol
Kdm5
Assembly
None
Location
Contig0:26679480-26687205[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.5e-25 9.5e-22 76.9 0.0 2 89 223 306 222 306 0.94
2 3 7 1.5e+04 -3.9 0.0 7 41 1012 1048 1008 1052 0.75
3 3 2.2 4.6e+03 -2.2 0.2 43 82 1299 1334 1297 1337 0.66

Sequence Information

Coding Sequence
ATGAAAAGTAAATCTAAAAACTCTTTGACGAACGGAAGTGGCAGCAGCGGGAGCAGTAGTAGCAGCAGCAGCAGCAATAGTAGTGGCAGTGGTAGTGATAATTACGCCAACGGCAGCACCTATGGGTCCTCCGGAGCGACGATGACAGGTGCGGCAGGGCCGGGGACAAACAGTGCCTCCGCTGGGACCGTCAATGGAGGCAGCAGACATCTGCAATCATCGTCTGCCATGAGTGCGGGAAATTCTCCGGGCGGCTCTATTGCTACCGCCGATGCCGGAGCATCCGGGCTGGGTGCTGATTGTGCGGATGACCAGCAAGATCAGCAACCGATGAACTATCACAACCATAATGCCCATCACAATAATCGCAACCATTTGTATCAGCAGCCAAAGCAGGGTGGCAACCGACCGCATATATCGCTCGACAAGTGCGACGACTTTCAGTTCAATGTTCCGCCGGAAGCTCCTGTGTTCGAACCGTCGGAGGAAGATTTCAAAAATCCGCTTGTCTACATCAACAAAATACGCCCGACGGCGGAAAAGTATGGAATCTGCAAAATACGACCACCGAGCTCCTGGCAGCCACCGTTTACCGTGGATGTGGAAAAGCTGACCTTTACGCCGCGCATTCAGCGGCTGAATGAATTGGAAGCGGAAACACGCATTAAGCTGAACTTTCTCGATCAAATTGCCAAATTTTGCGAGCTGCAAGGAACAACGCTGAAGATACCGATGGTAGAGCGGAAGCCGCTCGATCTATACACCCTGCACAAGATCGTAAACCAGGAGGGTGGTTTGGAGGTGGTAACGAAGGAGCGCAAATGGTCAAAAGTGGCGTGCCGCATGGGCTACCAGCAGGGCAAAAGTGTCGGTTCAAATCTGCGTATACACTACGACCGTTTGCTCTATCCGTTTGATGTGTATCGTTCGGGTAAGGTCGTAGATTTGGCTAACATTGACCCGGAGCCATCGGAAGATTGCGAGTATGAGCCGCATTGCATTGAGTCCCGGCAGCAGGTTCAACCGCCAATGACGGCGGCTCGCCGTTCGCAACGATTTGCACAGCAGCAGAGCAACAGCAAACCTTCCTCGACCGCGGGCAGCAGTGCGGGTGGCAGCGTTCGTGGCTCGTCGGATGAGATGTCGCCAAGCAAGAAGGAACTGCGCCATAGGAGTATGCTGGAGTTTGCGAGCAAACTGGCGGCAGCCGCCCGTGAACAAGCGGCCAGCAATGGCAATGGGGCGAAGGAGGAAAAAAGTGCCGTAGGTGGAACGCATGGGTACGATCCGATGGCAAAGTACATCTGTCACATGTGCAACCGGGGTGATGTGGAAGAATCGATGCTACTGTGCGACGGTTGTGATGCATCGTACCATACGTTCTGCCTGATGCCACCGTTGCAGGACATTCCGAAGGGTGACTGGCGTTGCCCGAAGTGTATTGTCGAGGAAAACTCGAAACCGGTGGAAGCGTTCGGGTTCGAGCAGGCGCAACGCGAGTACACGCTGCAACAGTTCGGCGAAATGGCCGATCAGTTCAAATCGAACTACTTCAACATGCCGGTCCATCTCGTACCGACCGAGCTGGTGGAGAAGGAATTTTGGCGCATCGTGTCATCGATCGATGAGGATGTGACGGTCGAGTATGGGGCCGATCTGCACACGATGGACCATGGTAGCGGGTTTCCGACGAAAGCGTCACCATACCTTACGTCGAACGATCAGGAGTATGCAGAATCGAGCTGGAACCTGAACAATCTGCCAGTGCTGGACGAATCGATCCTCGGACACATTAATGCCGACATCAGCGGTATGAAGGTACCGTGGATGTACGTCGGCATGTGCTTTGCTACCTTTTGCTGGCACAACGAGGACCACTGGAGCTACTCGATCAACTATCTGCACTGGGGTGAACCGAAAACGTGGTACGGTGTGCCCGGTAGCCGTGCGGAAGATTTCGAGCTGGCGATGAAATCGGCCGCACCCGAACTGTTCCATTCGCAGCCAGATTTGCTGCACCAGCTGGTAACGATTATGAATCCGAACATATTGATGAATGCGGACGTGCCCGTCTACCGGACGGATCAGCACGCGGGCGAATTTGTCGTTACATTCCCGCGCGCGTACCATGCCGGCTTTAATCAGGGGTATAACTTTGCCGAGGCGGTTAACTTTGCACCGGCGGACTGGATGAAGATGGGCCGGGAGTGTGTCAATCACTATTCGAAGCTAAGGCGATACTGTGTGTTTTCGCACGATGAGCTCGTGTGCAAGATGGCGCTGGAACCGGACAGACTTAATTTGGGTATCGCAACAGCGTGCTACATCGATATGGCGGAAATGGTTGATACGGAGAAAAAGTTGCGAAAGAATCTGCTCGAATGGGGTGTATCGAATGCAGAACGTGAAGCGTTTGAGCTGTTGACGGACGATGCGAGGCAGTGCGAAATTTGCAAAACCACCTGCTTCCTGTCGGCCGTCAACTGTAAATGTACCAAGAACCTAGCCTGCTTGCGCCATTTTGCCGAACTGTGCGAATGTCCGCCGGAAAACCACACACTCAAGTACCGGTACACGCTGGACGAGCTGCCGTTGATGGTGCAGAAGCTAAAGGTGAAGGCCGAATCGTTCGAAAAGTGGCTGTTCCGTGTACGCGACGTGCTGGATCCGTCGGTGGCAAGCTCGATCACGCTCGAGGAGCTGCAAAGCATTGCGCACGAAGCGGAAAGCCAAAAGTTCCCCAACAGTGTCATACTGGAGCGCCTGAACCTTTCCATACTGGAGGCGCAGAAGTGCATTACGGTCATACAGCAGCTTGATATTAATAAAATACGCACGCGCACACGAAATTCGCTCGAGTGCGCCAAGTACAAGCTGTCGATGGATGAGCTCGAGCTGTTTATCAACGAGATCAACAATCTGCGGTGCGTGATACGGGAAGGCGATAGCGTCCGTGAGCTGCAGCGCATCGGGCAGGAATGGTTGCGCCAGGCGGATAAAGCGCTAAAGTTACGCTTTAAGGACACTAACGTGCAGCAGCTAAATCAGCTGATCGAGGATGGCAATGCGCTGTGCATCGAGCTGCCGCAGATAACCGAGCTGAAGGATCGATTGACACAGTACAAATGGTACCGGGAGGTGCGAACGCTGCGTGAAAATACGGTCGATCGGCTATCGCTGGAAGAAATCAAGAAGCTCATTAACGAGGGAATGCGAATACTACCGCACACAGTATTAGAGAAAGAGCTGTCCCAGCTGCACGGTATTATGCTGCAGATCGTTGATTGGGAACAGTCAGCTAATCAGTGCTTCAAAACGGAAACGCAGCATAAGATCAGCGAAATCGATAGCCTTCTCGAGCGTGCGCAAAACATCGAAGCATTTCTTCCGCTTGCCGGTCAGCTGAAGGATGTGCTGCATAAATCGAAGGAATGGTTGCATGCGATCGAAACGCTGGAAAGTAGCAAAAATTACAACTTTTTCCACACGCTCCAAAATCTAGCGAATCGCGCAAAGCTGCTACCGGTAGAGATGGAAAGCAAGCTGCTGTGTGAAACCATCTTCGGTACAACGACCGCCGGTGGCGGTTGCTACAATCGTAACGGTGGTCAGATGTTGCTGTTTAACTCGCGGGGTTTCATCGGTGCCAGCAGTGATGAATGGCGCAGTAAATCCGCTACATCGCCTTCCGCCTCGCTGAAGCGAAAACGAAACGGATCAATCTCGAACCTGGACGATCCGGTAATCCCTACCCGTGGTTTGGAAACGATTATGAAAAAAATTAAAGAGGACGGTAGTATCGGAGAGCACGATAAGCGACTGTTGCGGGCAAAGCTGCTGCTGGACTGGAACGAAACGGATGGTGGAATAGGAAGCAGTAGTGACAAACAAATGCATGGACGCTATGACAATGTGCAGCAGCAGCAGCAGCAGCTGCAACAGCAACATCGTCTAAATAGTAGCGGATGCGATGTAGTTTATCATTGCGCGAAATGCTACGAGATGGTGGCCAAAGCTAACGTGCTGCGAAAGTATCGTCACAAGCAGCATCATCATCATTGCCGGCATCACGAACGGCACAGTAGGGTGGCCTTGAAGCAGGAGCAGAATCAACAGCAGCAAACTGCCGCTACGAACACAACTAAAATGTCGGCCATCGAGCAATTGTTGCAGATAAAAACATTGTCCGAAGATGATTTTGCCATCGAAAGAGGAACAAATGAAAGGGGGACGATTGACGGTGGCAGTAGCTTTGATGATTTTTCGTTCAAATTTGCCGAACACGACGATGGAGATGACGAGCCAGATGATGAGGAGGCGGCAGACGAGGTAAAGGCAGAGGACGAGGACGACGAGGAGGAGGAAGAGGAAGCTGCCGGTGTCGGGCAGCTGGGAAGGAATGGGTGCCATGGCTGTAAACCACCGGACGAACGTGAATCGAGCGTACTGAAACCGTTGCTCGCGTGCGGCAGAATAAAAGCGGAACCATTGGACAATGTTGCGGATCGCATCACCGTGAAGGAAGAGGCTTCGATGCGATCCAGTTCGAAAGGGACTGGTGGTGTCATACCCGCAACTCTTGGTCTAGAGAGCACTAGTCAGACAGCGGAAGCGCTAGCGGCAGCAAATGGAAGCCGGAGTTCTAACGGTGCGAACGGTGTCGGCAGCTCCACAAATGCTTCTCAACAATCCGACAGACAGCGACAAGAACAACACCAACAGAGTAATGTAGAAAGCTTATGA
Protein Sequence
MKSKSKNSLTNGSGSSGSSSSSSSSNSSGSGSDNYANGSTYGSSGATMTGAAGPGTNSASAGTVNGGSRHLQSSSAMSAGNSPGGSIATADAGASGLGADCADDQQDQQPMNYHNHNAHHNNRNHLYQQPKQGGNRPHISLDKCDDFQFNVPPEAPVFEPSEEDFKNPLVYINKIRPTAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKVACRMGYQQGKSVGSNLRIHYDRLLYPFDVYRSGKVVDLANIDPEPSEDCEYEPHCIESRQQVQPPMTAARRSQRFAQQQSNSKPSSTAGSSAGGSVRGSSDEMSPSKKELRHRSMLEFASKLAAAAREQAASNGNGAKEEKSAVGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKASPYLTSNDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNADVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLSMDELELFINEINNLRCVIREGDSVRELQRIGQEWLRQADKALKLRFKDTNVQQLNQLIEDGNALCIELPQITELKDRLTQYKWYREVRTLRENTVDRLSLEEIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDSLLERAQNIEAFLPLAGQLKDVLHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTAGGGCYNRNGGQMLLFNSRGFIGASSDEWRSKSATSPSASLKRKRNGSISNLDDPVIPTRGLETIMKKIKEDGSIGEHDKRLLRAKLLLDWNETDGGIGSSSDKQMHGRYDNVQQQQQQLQQQHRLNSSGCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSRVALKQEQNQQQQTAATNTTKMSAIEQLLQIKTLSEDDFAIERGTNERGTIDGGSSFDDFSFKFAEHDDGDDEPDDEEAADEVKAEDEDDEEEEEEAAGVGQLGRNGCHGCKPPDERESSVLKPLLACGRIKAEPLDNVADRITVKEEASMRSSSKGTGGVIPATLGLESTSQTAEALAAANGSRSSNGANGVGSSTNASQQSDRQRQEQHQQSNVESL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
iTF_00104942; iTF_00097567;
80% Identity
-