Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000473445.2
Location
KI915054.1:1768291-1773542[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-25 2.5e-22 78.6 0.0 2 89 106 189 105 189 0.94
2 2 1.2 2.1e+03 -1.3 0.0 6 42 904 942 900 959 0.82

Sequence Information

Coding Sequence
ATGAAAACTAAATCCAGGAACTCTTTAACGAACGGCAGTGGTAATAGCAGTAGTGGCAGTGGCAGCGATAATTACGCCAACGGCAGCTCCTATGGACCCGCTGGAACAGCAATGGCCGGAGCAGGAGGGCCGGCTAGCGCCTCCGCTGGGTCCATGAATGGCAAGCATCAGCACTCCAGTGCTGGTGAAAAGTACGGAATTTGCAAGATTCTGCCACCAAGCTCCTGGCAGCCTCCCTTCACCGTGGATGTAGAAAAACTAACCTTTACACCACGCATCCAGCGGCTGAACGAACTGGAGGCGGAAACACGAATCAAACTGAACTTTCTCGATCAGATTGCAAAATTCTGCGAACTACAAGGCACGACACTCAAGATTCCAATGGTAGAACGGAAACCACTCGATCTCTACACACTGCATAAGATCGTCAACCAGGAGGGTGGTCTGGAGGTGGTGACAAAAGAACGCAAATGGTCAAAGATAGCGTGTCGTATGGGCTACCAGCAGGGCAAGAGCGTTGGATCGAATCTACGCGCACACTATGATCGGCTGTTGTATCCATTCGACTTGTATCGCTCGGGAAAGGTAGTGGATTGGGCAAATATTGATCCGGAACCATCAGAGGACTGCGAATACGAACCACATTGCATCGAGTCGAGACAGCAAGTACAACCTCCGATGGCAGTTACGGCTCGTCGCTCACAACGCTTCGCTCAGCAGCAGAACAACAACAGCAAACCATCGTCAGCGGCTGGAAGTAGTGCAGGTGGCAGTGTTCGAGGATCATCGGATGAAATGTCGCCCGGAAAAAAGGAGCTGCGGCATAGGAACATGCTCGAGTTTGCCAGTAAAATCGCCACCGCTGCTCGAGATCAAGCGGCAGCGGCTGCGGCCTCGACTAACGGTGCAGGATCGAAGGACGAAAAGAGTGCAGGTGCGGGAGCAGGAGGAACGCATGGTTACGATCCCATGGCAAAGTACATCTGCCATATGTGCAATCGGGGTGACGTCGAGGAGTCGATGCTACTGTGCGATGGGTGCGATGCGTCCTACCACACATTTTGTCTGATGCCACCATTGCAGGACATTCCGAAGGGTGACTGGCGTTGCCCGAAGTGTATCGTCGAGGAGAATTCGAAACCGGTGGACGCATTCGGCTTCGAACAGGCGCAACGCGAGTACACGCTACAACAGTTTGGAGAGATGGCGGATCAGTTTAAGTCGAACTACTTCAACATGCCGGTCCATCTCGTGCCGACCAAGTTGGTTGAGAAAGAGTTTTGGCGCATCGTTTCATCCATCGACGAGGACGTCACCGTCGAGTACGGTGCCGATCTGCACACGATGGACCATGGCAGTGGTTTCCCGACCAAGGCCTCGCCGTATCTGACGACGAGCGACCAGGAGTACGCTGAATCGTGCTGGAACCTCAACAATCTTCCCGTGCTGGATGAGTCCATACTTGGCCACATCAACGCGGACATCAGCGGCATGAAGGTGCCGTGGATGTACGTCGGCATGTGCTTTGCCACCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATCTGCACTGGGGCGAACCTAAGACGTGGTACGGTGTGCCCGGCAGCCGAGCGGAAGACTTCGAGCTGGCCATGAAATCGGCTGCCCCGGAGCTGTTCCACTCGCAGCCGGATTTGCTTCACCAGCTGGTGACGATTATGAACCCGAACATTCTGATGAACGCCAACGTGCCCGTCTTTCGGACGGATCAGCACGCGGGCGAGTTTGTGGTGACATTCCCGCGGGCGTACCATGCCGGTTTCAATCAGGGTTACAACTTTGCCGAGGCGGTCAATTTTGCACCGGCCGACTGGATGAAGATGGGCCGGGAATGCGTCAATCACTACTCGAAGCTGCGGCGTTACTGTGTCTTTTCGCACGATGAGCTCGTTTGCAAGATGGCGCTCGAGCCGGACCGGCTAAATTTGGGCATCGCCACCGCGTGCTACATCGATATGGCGGAGATGGTGGACACGGAGAAGAAGCTGCGGAAGAATCTTCTAGAATGGGGTGTTTCAAATGCCGAACGGGAAGCGTTCGAACTACTGACGGATGATGCGAGACAATGCGAAATTTGCAAAACAACCTGCTTCCTTTCCGCCGTCAACTGCAAGTGCACCAAGAACCTCGCTTGTCTGCGCCATTTCGCCGAGTTGTGCGAATGTCCGCCCGAAAACCACACCCTGAAGTATCGGTACACGCTGGACGAGCTACCGTTGATGGTGCAGAAGCTGAAGGTGAAGGCGGAATCGTTCGAAAAGTGGCTGTTTCGTGTGCGCGACGTGCTGGATCCATCCGTCGCAAGCAGCATTACGCTCGAGGAGCTGCAAAGCATCGCCCACGAGGCGGAAAGTCAAAAGTTTCCCAACAGCGTCATACTGGAGCGCTTGAATCTGTCCATACTGGAGGCGCAGAAGTGCATCACGGTCATACAGCAGCTCGACATAAACAAGATCCGTACGCGCACACGCAACTCGTTGGAGTGCGCCAAGTACAAGTTGACGATGGATGAGCTGGAGCTGTTTATCAACGAGATTAACAATCTGCGATGCGTTATCCGCGAGGGTGACAGTGTGCGGGAGCTGCAGCGCATCGGACAGGACTGGTTGCGGCAGGCGGACAAAGCGTTGAACTTACGGTTTAAGGACACGAACGTGCAACAGCTCAATCAGCTCATCGAGGAGGGCAACGCGCTCTGCATCGAGCTACCGCAGATTGCGGAGCTGAAGGAACGGCTGACGCAGTACAAATGGTACCGAGAGGTGCGAACGTTGCGCGAATACACGGTCGACCGTATGTCGCTGGAGGACATTAAGAAGCTCATCAACGAGGGCATGCGAATACTACCGCACACAGTATTAGAGAAAGAGCTGTCACAGCTGCACGGTATTATGCTGCAGATTGTGGATTGGGAGCAGTCGGCGAACCAGTGTTTCAAAACGGAAACGCAACATAAGATCAGTGAAATCGACAATCTGCTGGAGCGAGCGCAAAACATCGAAGCGTTCCTGCCCCTGGCCGGTCAGCTGAAGGACGCCCTGCACAAGTCGAAGGAATGGTTACACGCGATCGAAACGCTGGAGAGCAGCAAAAACTACAACTTTTTCCACACACTCCAAAACCTGGCCAACCGGGCGAAGCTGCTGCCGGTCGAAATGGAGAGCAAGCTGCTGTGCGAGACGATATTCGGCACGACGACGACGAACACGACGACGACGACGACGGGCGGCGGTTGCTACAATCGTACCGGCGGTCAGACACTGCTGTTCAACTCCGTGGGCTTCATCGGCGCGAGTGGTGACGATTGGCGCGGCAAAGCTGCCTCCTCACCGTCGACTTCGCTGAAGCGAAAGCGAAACGGATCCATAACAAGCCTGGACGATCCGGTGCTTCCAGCCAGTGGTATAGAAACCATTATGAAGAAGATCAAGGAGGATAGTGGCATTGGGGAGCAGGATAAGCGCCGTGTCGTTGCGAAGGAGGAACCAACCCATGCGCAACCGGTAACCGGTAACAGTGGCAGCCTATCATCCTTGGAACAGTTGCTGCAGATTAAAACACTTACCGAGGAAGATTTTCGGGTTGAAAGTAGCGCCATTGAGGGTGGCAGTAGTTTCGATGATTTTTCGCTGAAATTCGGCGATCATTATGATGCGGAGGACGAACCGGAGGACGAAGAAGCCGCCGATGAGCCGATGAAAGCGGAAGAAGACGAAGAAGATGAGGAAGCGGAAGCTACCACCGGATCGGTCGGGCAACTCGGACGGAAAGGTTGCCATGGTTGCAAACCACCAGAACCGGTGCATGAACGAGCCAAGCTGTCGGCAGGTATGCCGAACTGCGCTGGTGGTCGAATAAAGCTCGAACCGATGGACAATGATGATGACGATGGTGATGGGCGGCTAACGATGGAGGGCGAGAAAGCGGAAGCAAGATCACGGAGCAGTGCAAAAAGCGTTGTCGGTGGCGTAGGTGCAACCGTGACGAGTGTTTGCACCACCGAGAGTACTAGTCAATTGTCGGAAGTGCCCTCCGGGAACGTTGGAAGTCGGCATTCCAATGGGGGCGGTACCGGTACCTCTACAAATGCCACCGCAACGCTGCACGAACACCAACACCAACAGACGACCAACCAAAAGCACACGGAAAGCTTATGA
Protein Sequence
MKTKSRNSLTNGSGNSSSGSGSDNYANGSSYGPAGTAMAGAGGPASASAGSMNGKHQHSSAGEKYGICKILPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKIACRMGYQQGKSVGSNLRAHYDRLLYPFDLYRSGKVVDWANIDPEPSEDCEYEPHCIESRQQVQPPMAVTARRSQRFAQQQNNNSKPSSAAGSSAGGSVRGSSDEMSPGKKELRHRNMLEFASKIATAARDQAAAAAASTNGAGSKDEKSAGAGAGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVDAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTKLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKASPYLTTSDQEYAESCWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNANVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINNLRCVIREGDSVRELQRIGQDWLRQADKALNLRFKDTNVQQLNQLIEEGNALCIELPQIAELKERLTQYKWYREVRTLREYTVDRMSLEDIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDNLLERAQNIEAFLPLAGQLKDALHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTTNTTTTTTGGGCYNRTGGQTLLFNSVGFIGASGDDWRGKAASSPSTSLKRKRNGSITSLDDPVLPASGIETIMKKIKEDSGIGEQDKRRVVAKEEPTHAQPVTGNSGSLSSLEQLLQIKTLTEEDFRVESSAIEGGSSFDDFSLKFGDHYDAEDEPEDEEAADEPMKAEEDEEDEEAEATTGSVGQLGRKGCHGCKPPEPVHERAKLSAGMPNCAGGRIKLEPMDNDDDDGDGRLTMEGEKAEARSRSSAKSVVGGVGATVTSVCTTESTSQLSEVPSGNVGSRHSNGGGTGTSTNATATLHEHQHQQTTNQKHTESL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
-
80% Identity
-