Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000349025.1
Location
KB663721.1:20891121-20899295[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.5e-25 8.2e-22 76.9 0.0 2 89 221 304 220 304 0.94
2 3 7 1.3e+04 -3.9 0.0 7 41 1010 1046 1006 1050 0.75
3 3 3.4 6.3e+03 -2.8 0.2 43 82 1298 1333 1296 1335 0.55

Sequence Information

Coding Sequence
ATGAAAAATAAGTCTAAAAACTCTTTGACGAACGGAAgtggcagtagcagcagcagcagcaatagtaGTGGCAGTGGTAGTGATAATTACGCCAACGGCAGCGCCTATGGGTCCGCCGGAGCAACGATGACAGGTGCGGCAGGGCCGGGGACGCACAGTGCCTCCGCTGGGACCGTCAATGGAGGCGGCAGACATCTTCAATCCTCCGCCAGCATGAGTGCTGGAAATTCGCCGAGCAGATCGGTTGCCACCGTCGCCGACGTCGGAGCATCCGGGCTGGGTGGTGATTGTGCCGATGAGCAGCTGGATCAACCACCGATGAACTATCACAACCATAATGCTCATCACAACAACCGGAGCCATTTAtatcagcagcaaaaacagggtggtggtggtaaccGGCCGCACATATCGCTCGACAAGTGCGACGATTTTCAGTTCAAAGTTCCGGACGAAGCTCCTGTTTTCGAACCGTCGGAGGAAGATTTCAAAAATCCCCTTGTGTACATCAACAAAATACGCCCGACGGCGGAAAAGTACGGCATCTGCAAAATTCGACCCCCGAGCTCCTGGCAGCCTCCCTTCACGGTGGATGTGGAAAAGCTAACCTTTACGCCACGCATCCAGCGGCTGAACGAATTGGAAGCGGAAACGCGCATCAAGTTGAACTTTCTCGATCAAATAGCCAAATTTTGCGAGCTGCAAGGCACAACGCTGAAGATACCGATGGTCGAACGGAAACCGCTCGATCTGTACACGCTGCACAAGATCGTCAACCAGGAGGGTGGTTTGGAGGTGGTCACGAAGGAGCGCAAATGGTCAAAGGTGGCATGTCGCATGGGTTACCAGCAGGGTAAAAGTGTCGGGTCAAATCTACGCATCCATTACGACCGGTTGCTTTATCCGTTCGATGTGTACCGTTCCGGGAAGGTGGTGGATTTGGGCAACATCGATCCGGAACCGTCGGAGGATTGCGAGTACGAGCCGCACTGCATTGAGTCCCGGCAGCAGGTACAACCCCCGATGACGGCCGCACGCCGTTCGCAGCGCTTTGCCCAGCAGCAGAGCAACAGCAAACCGTCGTCGACGGCGGGCAGCAGCGCCGGGGGGAGTGTCCGTGGATCGTCGGATGAAATGTCACCGAGCAAGAAGGAGCTGCGGCACAGAAATATGCTGGAGTTTGCAAGCAAACTGGCGGCTGCCGCACGCGAACAAGCGGCCTCGAATGGGAGTGCCTCGAAGGAGGAGAAAAGTACCGCGGGTGGTACGCATGGGTACGATCCGATGGCCAAGTACATCTGCCACATGTGCAATCGGGGTGACGTCGAAGAATCGATGCTGCTGTGCGATGGGTGTGATGCGTCGTACCATACGTTCTGCCTGATGCCACCGTTGCAGGACATTCCGAAGGGTGACTGGCGTTGCCCGAAGTGTATTGTGGAGGAAAACTCCAAACCGGTGGAAGCGTTCGGGTTCGAGCAGGCGCAACGCGAGTACACGCTGCAGCAGTTCGGCGAGATGGCCGATCAGTTCAAGTCGAACTACTTCAACATGCCGGTCCACCTCGTACCGACCGATCTGGTGGAGAAGGAATTTTGGCGCATCGTGTCCTCGATCGATGAGGATGTGACGGTCGAGTATGGGGCCGATTTGCACACGATGGATCATGGCAGCGGGTTCCCGACCAAAGCGTCACCGTATCTCACGTCGAACGATCAGGAGTATGCGGAATCGAGCTGGAACCTCAACAACTTGCCCGTGCTGGACGAATCGATCCTGGGACACATCAATGCCGACATCAGCGGCATGAAGGTACCGTGGATGTACGTGGGCATGTGCTTTGCGACGTTTTGCTGGCACAATGAGGATCACTGGAGCTACTCGATCAACTATCTGCACTGGGGTGAACCGAAAACGTGGTACGGTGTGCCGGGCAGTCGGGCGGAAGATTTCGAGCTCGCGATGAAATCGGCCGCCCCGGAGCTGTTCCATTCGCAGCCGGATTTGCTGCACCAGCTGGTGACGATCATGAACCCGAACATACTGATGAACGCGGACGTGCCGGTATACCGGACGGATCAGCACGCGGGCGAGTTTGTCGTTACATTCCCGCGCGCGTACCATGCCGGGTTTAACCAGGGCTACAACTTTGCGGAGGCGGTCAACTTTGCGCCCGCCGACTGGATGAAGATGGGCCGGGAGTGTGTCAATCACTATTCGAAGCTGCGCCGGTACTGCGTGTTTTCGCACGACGAGCTCGTGTGCAAGATGGCGCTGGAACCGGACAGGCTTAACTTGGGCATTGCGACCGCGTGCTACATCGATATGGCGGAAATGGTGGATACGGAGAAAAAGCTGCGCAAAAATCTACTAGAATGgGGCGTATCCAATGCTGAACGGGAAGCGTTCGAGCTGCTGACCGATGACGCAAGGCAGTGtgaaatttgcaaaaccaccTGCTTCCTGTCGGCCGTTAACTGCAAGTGTACCAAGAACCTGGCCTGCCTGCGCCATTTTGCCGAACTGTGCGAATGTCCACCGGAACACCACACACTCAAGTACCGGTACACGCTGGACGAGTTGCCGCTGATGGTGCAAAAGCTGAAGGTAAAGGcggaatcgttcgaaaagTGGTTGTTCCGCGTGCGTGACGTGCTGGATCCGTCCGTTGCCAGCAGCATCACGCTGGAGGAGCTCCAGAGCATTGCGCACGAGGCGGAAAGCCAAAAGTTCCCGAACAGCGTCATATTGGAGCGGTTGAACCTTTCCATACTGGAGGCCCAGAAGTGCATTACGGTCATACAGCAGCtggacataaataaaatacgcaCGCGCACGCGGAACTCGCTCGAGTGCGCCAAGTACAAGCTGTCGATGGACGAGCTGGAGCTGTTCATCAACGAGATCAACAACCTGCGGTGCGTTATACGGGAGGGCGATAGTGTGCGTGAGCTGCAGCGCATCGGGCAGGAATGGTTACGCCAGGCGGATAAGGCGTTGAAGTTACGCTTCAAGGATACGAACGTGCAGCAGCTGAACCAGCTGATCGAGGATGGGAACGCGCTGTGCATCGAGCTGCCGCAAATTACCGAGCTGAAGGATCGGTTGACGCAGTACAAATGGTACCGGGAGGTGAGAACGTTGCGGGAGAACACGGTCGACCGGCTGTCGCTGGAGGAAATCAAGAAGCTCATTAACGAGGGGATGCGTATACTACCGCATACAGTATTAGAGAAAGAACTGTCCCAGTTGCACGGTATTATGTTGCAGATCGTTGATTGGGAGCAGTCAGCTAATCAGTGCTTCAAGACGGAAACGCAACACAAGATCAGCGAAATCGATAGTCTGCTCGAGCGTGCGCAAAACATCGAAGCATTTTTGCCATACGCCGGCCAGCTGAAGGATGTGCTGCACAAGTCGAAGGAATGGTTGCACGCGATCGAAACGCTGGAAAGTAGCAAAAATTACAACTTTTTCCACACACTCCAAAATCTGGCAAACCGGGCCAAGCTGCTGCCGGTGGAGATGGAAAGCAAGCTGCTGTGCGAAACGATCTTCGGCACAACGACCGCCGGTGGGGGCTGCTACAATCGGAACGGTGGCCAGATGTTACTGTTCAACTCGCGCGGTTTCATCGGCGCTAGCGGTGACGAATGGCGCAGCAAATCGGCGTCCACTTCGCCGTCCACCGCGCTGAAGcggaaacggaacggttcAATCTCGAACCTGGACGATCCGGTCATACCGACCCGAGGGTTGGAAAcggttatgaaaaaaattaaggaaGACGGTAGCATTGGGGAACACGATAAGCGGCTGCTCAGGGCGAAGCTGTTGCAGGACTGGAACGAAACGGATGGTGGGATGGGAAGCAGTAGTGACAAGCACATGCTTGGAAGCTACGACACtgtgcaccagcagcagcagcagcaacagcaacaacatcgtCAAAATAGTAGTGGTTGCGACGTCGTGTACCATTGCGCCAAGTGTTACGAGATGGTGGCCAAAGCAAACGTGCTGCGCAAGTATCGCCACAagcagcatcaccatcactgCCGGCATCACGAACGGCACAGCAGTAGGGTGGTCGTGAAGCAGGAGCAGAATTCCACTGCAAACGCGAGCAATGTATCCGCCATGGAGCAATTGCTGCAGATAAAAACGTTGTGCGAGGATGACTTTGTGGTCGGAAAAGACGCAAACGAACGGACGGAGGCTGACGGTGGTAGcagttttgatgatttttcgtTCAAATTTGCCGAACCCGACGACGGTGAGGATGAGCCGGACGATGAGGAGGCAGCGGACGAGGTGAAGGCGGAGGATGAGGACGATGACGAGGAGGAAGCTGCCGGTGTCGGTCAGCTGGGTAGGAACGGGTGCCATGGCTGTAAACCGCCCGAAGAACCGGAGCGAACCTCGGACGTACTGAAATCTTCGACCGCATCCCCCGGTAGCAGAATAAAGCAGGAACCGTTGGACAACGAGAAGGAAGAGGTTCACGGGCGCTTCGGTTCGAAAGGCTCTGTGCTGGCCGCCACAACTCTCAGTCTGGAGAGCACTAGTCAAGCGTTGGAAGCAGCGCTAGCAGCGAATGGAAGCCGAAGTTCCAACGGGTCGGCGAACGGTGTCAGCGGCAGCAAGAATTCAACGCCCCAATCCGACCGCCAGCGACAGGAACCACACCAACAGAGTAATGTAGAAAGCTTATGA
Protein Sequence
MKNKSKNSLTNGSGSSSSSSNSSGSGSDNYANGSAYGSAGATMTGAAGPGTHSASAGTVNGGGRHLQSSASMSAGNSPSRSVATVADVGASGLGGDCADEQLDQPPMNYHNHNAHHNNRSHLYQQQKQGGGGNRPHISLDKCDDFQFKVPDEAPVFEPSEEDFKNPLVYINKIRPTAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKVACRMGYQQGKSVGSNLRIHYDRLLYPFDVYRSGKVVDLGNIDPEPSEDCEYEPHCIESRQQVQPPMTAARRSQRFAQQQSNSKPSSTAGSSAGGSVRGSSDEMSPSKKELRHRNMLEFASKLAAAAREQAASNGSASKEEKSTAGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTDLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKASPYLTSNDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNADVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPEHHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLSMDELELFINEINNLRCVIREGDSVRELQRIGQEWLRQADKALKLRFKDTNVQQLNQLIEDGNALCIELPQITELKDRLTQYKWYREVRTLRENTVDRLSLEEIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDSLLERAQNIEAFLPYAGQLKDVLHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTAGGGCYNRNGGQMLLFNSRGFIGASGDEWRSKSASTSPSTALKRKRNGSISNLDDPVIPTRGLETVMKKIKEDGSIGEHDKRLLRAKLLQDWNETDGGMGSSSDKHMLGSYDTVHQQQQQQQQQHRQNSSGCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSSRVVVKQEQNSTANASNVSAMEQLLQIKTLCEDDFVVGKDANERTEADGGSSFDDFSFKFAEPDDGEDEPDDEEAADEVKAEDEDDDEEEAAGVGQLGRNGCHGCKPPEEPERTSDVLKSSTASPGSRIKQEPLDNEKEEVHGRFGSKGSVLAATTLSLESTSQALEAALAANGSRSSNGSANGVSGSKNSTPQSDRQRQEPHQQSNVESL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
iTF_00101478;
80% Identity
-