Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000349145.1
Location
KB672913.1:2087731-2095178[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-25 5e-22 77.6 0.0 2 89 213 296 212 296 0.94
2 2 2.8 4.3e+03 -2.3 0.0 6 41 1010 1047 1006 1060 0.81

Sequence Information

Coding Sequence
ATGAAAAGTAAATCCAGAAACTCTTTAACAAACGGCAGTggtaatagtagtagtggtagtggcagCGATAATTACGCCAACGGGAGCTCCTATGGGtccgcagcggcagcaatgGCTGGCACGGGAGGGCCGGCTGGTGCCTCCGCTGGGCCCATGAATGGCAAGCATCAGCACTCCTCGCCTAGCGTTGGCGGTGCAGGAAATGCTCATGGCGGATCTACATCCTCCGGCGATGCCGGGGCATCCGGGATGGGTGCTGATTATgaaaaccaccagcagcagcagcagcagcagcaggagcagccgGTGATCAACCACCATAGCCATCAAAATAATCGCAACCATCTGTATCAGCAGCAAAAGCTGGGTGGCAACCGACCGCATATATCGCTGGACAAGTGCGATGATTTCCAATTCAATGTTCCACCGGAAGCTCCCGTTTTTGAGCCGTCGGAGGAAGATTTCAAAAATCCTCTCGTCTACATCAACAAGATACGTCCGATGGCAGAAAAGTATGGAATTTGCAAAATTCGACCCCCAAGCTCCTGGCAGCCTCCCTTCACCGTGGATGTAGAGAAACTAACCTTTACACCACGCATCCAGCGGCTGAACGAATTGGAGGCGGAAACACGAATCAAACTGAACTTTCTCGATCAGATTGCAAAATTCTGCGAGCTACAGGGCACGACTCTGAAGATACCGATGGTGGAACGGAAACCGCTCGATCTCTACACTCTGCATAAGATCGTCAACCAGGAGGGTGGCTTGGAGCTGGTGACAAAAGAGCGCAAATGGTCGAAGATAGCGTGCCGTATGGGCTACCAGCAGGGTAAGAGCGTCGGGTCGAATCTGCGTGCTCACTACGACCGTCTGCTGTACCCTTTCGACGTGTACCGTTCGGGGAAGGTAGTCGATTTGGCAAATATAGATCCGGAGCCTTCGGAAGATTGCGAGTACGAACCGCACTGTATCGAGTCCCGGCAGCAGGTTCAACCTCCCATGGCGGTTACGGCTCGCCGTTCACAACGTTtcgcgcagcagcagagcaacagcagcaagccTTCGTCGACGGCAGGAAGTAGCGCTGGCGGAAGTGTTCGCGGATCCTCAGATGAAATGTCGCCCGGCAAGAAGGAGCTGCGACACAGGAACATGCTCGAGTTTGCCAGTAAGCTCGCCGCCGTTGCGCGAGATCAAgctgcggcagcggctgctgcgaCGAATGGCGCAGGATCGAAGGACGAAAAGAGTGCGGTTGTAGGTGGCGGAACGCATGGCTATGATCCGATGGCGAAGTACATCTGCCACATGTGTAATCGGGGCGACGTCGAGGAGTCGATGCTGCTGTGCGATGGGTGTGATGCGTCGTACCATACCTTCTGTCTGATGCCACCATTGCAGGACATTCCGAAGGGCGACTGGCGTTGTCCGAAATGTATCGTCGAGGAGAATTCGAAGCCGGTGGAAGCGTTCGGCTTTGAGCAGGCGCAACGCGAGTACACGCTACAGCAGTTTGGCGAGATGGCGGACCAGTTCAAGTCGAACTACTTCAACATGCCGGTCCATCTCGTACCGACCGAGTTGGTAGAGAAAGAGTTTTGGCGCATAGTGTCCTCCATCGACGAGGACGTAACGGTCGAGTACGGTGCCGATCTGCATACAATGGACCACGGCAGTGGCTTCCCGACGAAGGCTTCACCGTATCTTACGTCGAGCGACCAGGAGTACGCAGAATCTTGTTGGAACCTCAACAATCTACCCGTGCTGGACGAGTCCATTCTTGGCCACATCAACGCGGACATCAGCGGCATGAAGGTGCCGTGGATGTACGTCGGCATGTGCTTTGCCACGTTTTGCTGGCACAACGAGGATCACTGGAGCTATTCGATCAACTATCTGCACTGGGGCGAACCTAAAACGTGGTACGGTGTGCCAGGTAGCCGAGCGGAAGAGTTCGAGCTGGCCATGAAATCGGCCGCCCCGGAGCTGTTCCACTCGCAGCCGGACTTGCTGCACCAGCTGGTGACGATTATGAATCCAAACATTCTGATGAACGCCAACGTACCCGTCTTCCGGACGGATCAGCACGCGGGCGAGTTTGTGGTGACATTCCCGCGGGCGTACCACGCCGGCTTCAACCAGGGGTACAACTTTGCCGAGGCGGTCAACTTTGCGCCGGCCGATTGGATGAAGATGGGACGGGAATGTGTCAATCATTACTCGAAACTGCGGCGGTACTGTGTCTTCTCGCACGACGAACTCGTCTGCAAGATGGCGCTGGAACCAGACCGGCTGAATTTGGGCATTGCAACAGCGTGCTACATCGACATGGCGGAGATGGTGGACACGGAGAAGAAGCTGCGAAAGAATCTCCTAGAATGGGGTGTTTCAAATGCTGAACGGGAAGCGTTCGAGCTGCTGACTGACGATGCTAGACAATGCGAAATCTGCAAGACGACCTGTTTCCTTTCCGCCGTCAACTGCAAGTGCACCAAGAACCTAGCCTGTCTGCGACATTTCGCCGAGTTGTGCGAATGTCCACCGGAAAACCATACCCTCAAGTATCGGTACACACTGGACGAGCTACCGCTGATGGTACAGAAGCTGAAGGTAAAGGCAGAGTCGTTTGAGAAGTGGCTGTTCCGCGTGCGTGACGTGCTCGATCCATCCGTCGCCAGCTGCATTACGCTCGAGGAGCTGCAAAGCATCGCCCACGAGGCTGAGAGTCAAAAGTTTCCTAACAGCGTTATTTTGGAGCGTTTGAATCTGTCCATACTGGAAGCGCAGAAGTGCATTACAGTCATTCAGCAGCTCGATATCAATAAGATACGTACGCGCACACGCAACTCGTTGGAATGTGCCAAGTACAAGCTGACGATGGATGAGCTCGAGCTGTTTATCAATGAGATCAACAATCTGCGCTGCGTTATCCGCGAGGGCGACAGTGTGCGGGAGCTGCAGCGCATCGGCCAGGATTGGTTGCGACAGGCAGACAAAGCGTTGAAGTTACGCTTCAAGGACACAAACGTGCAGCAGCTCAATCAGCTAATTGAGGAGGGTAACGCGCTTTGCATCGAGCTGCCGCAGATTGCGGAACTGAAGGATCGGCTGACGCAGTACAAATGGTACCGGGAGGTGCGAACATTGCGTGAAAACACGGTCGACCGATTGTCGCTGGAGGACATCAAAAAGCTCATAAACGAAGGTATGCGAATACTACCACACACAGTATTAGAGAAAGAGCTGTCACAGTTGCACGGTATCATGCTGCAGATTGTTGATTGGGAGCAATCGGCCAATCAGTGCTTCAAAACGGAAACGCAGCACAAGATCAGCGAAATCGACAATCTGCTGGAGCGTGCGCAAAACATCGAAGCATTCTTGCCACTGGCCGGTCAACTGAAGGACGTACTCCACAAGTCGAAGGAATGGCTGCATGCGATCGAAACACTGGAGAGTAGCAAAAACTACAACTTTTTCCACACGCTCCAGAACCTGGCTAACAGGGcgaagctgctgccggtcgagATGGAGAGCAAGTTGCTGTGCGAAACGATCTTTGGAACAACGACGGCTGGCGGTAGTTGCTACAATCGCACCGGCGGTCAGATGTTGCTGTTCAATTCGATGGGCTTCATCGGCGCTAGTGGCGACGAATGGCGCAACAAATCTGCCTCCTCGCCGTCAACGTCGCtgaagcggaagcggaacggaTCCATAACGAGCCTGGACGATCCAGTAATCCCTGCCAGTGGAATGGAAACAATTATGAAGAAGATCAAAGAGGACAGTGGCATTGGCGAGCAGGATAAGAGGTTACTGCGTGCGAAACTACTGCTGGACTGGAATGAGTCGGAGCAGGGCAGTGACGAACATATGCTTGGCAGATATGACGGCGTCCAGgagaggcagcagcaacgaaatcGATCAAATAACAATAGCTGTGACGTAGTGTATCATTGCGCAAAGTGCTACGAGATGGTGGCCAAGGCCAATGTTTTGCGAAAATATCGTCAtaaacagcatcatcatcactgtCGGCATCACGAAAGGCACAGTCGGGTGGTGGCGAAGCAGGAACCAAACCATCCGCCAGCGATCACCGGCAGTCTATCGTCGCTGGAGCAGttgttgcaaataaaaactctTACCGAGGAAGATTTTCGCGTTGAAAACAGCGCCAACGGAACGGACGCGGCCGATGAGGGCGGAAGTAGTTTCGATGatttttcgttgaaatttGGCGACCATTATGACGGGGAAGACGAACCGGAAGACGAGGAGGCCGCCGACGAAGTGAAAGCGgaagaggacgaggaggatgaggacgaAGAGGTAACGGCCGGATTGGATGGACAGCTTGGGCGGAATGGGTGCCATGGGTGCAAACCACCAGAGCCGGAGCATGAACGAGAACAGCTGTTCATCACCTGCAGTGGCGGTCGAATAAAGGCCGAACCAATGGACAACGATGGTGAAGGCCGCATGGCGACAAAGGACGAGAAAGCGGAACCAAGATCCCGGAGCAGTGTGAAAagcgctggcggtggtggtgggataGGTGCAAACGACGCGAGTATTTGCACCACCGAGAGTACTAGTCAATCGTTTGAAGCGCTATCCGGGAACCACGGAAGTCGGCATTCCAACGGGGGCAGCATCGGTACCTCTACAAATGCCACCGCTACGTTGCACACGCAACACGAGCAACACCAACAGACGACTAATCATCAGCACGCGGCAAACTTATGA
Protein Sequence
MKSKSRNSLTNGSGNSSSGSGSDNYANGSSYGSAAAAMAGTGGPAGASAGPMNGKHQHSSPSVGGAGNAHGGSTSSGDAGASGMGADYENHQQQQQQQQEQPVINHHSHQNNRNHLYQQQKLGGNRPHISLDKCDDFQFNVPPEAPVFEPSEEDFKNPLVYINKIRPMAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLELVTKERKWSKIACRMGYQQGKSVGSNLRAHYDRLLYPFDVYRSGKVVDLANIDPEPSEDCEYEPHCIESRQQVQPPMAVTARRSQRFAQQQSNSSKPSSTAGSSAGGSVRGSSDEMSPGKKELRHRNMLEFASKLAAVARDQAAAAAAATNGAGSKDEKSAVVGGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKASPYLTSSDQEYAESCWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEEFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNANVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASCITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINNLRCVIREGDSVRELQRIGQDWLRQADKALKLRFKDTNVQQLNQLIEEGNALCIELPQIAELKDRLTQYKWYREVRTLRENTVDRLSLEDIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDNLLERAQNIEAFLPLAGQLKDVLHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTAGGSCYNRTGGQMLLFNSMGFIGASGDEWRNKSASSPSTSLKRKRNGSITSLDDPVIPASGMETIMKKIKEDSGIGEQDKRLLRAKLLLDWNESEQGSDEHMLGRYDGVQERQQQRNRSNNNSCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSRVVAKQEPNHPPAITGSLSSLEQLLQIKTLTEEDFRVENSANGTDAADEGGSSFDDFSLKFGDHYDGEDEPEDEEAADEVKAEEDEEDEDEEVTAGLDGQLGRNGCHGCKPPEPEHEREQLFITCSGGRIKAEPMDNDGEGRMATKDEKAEPRSRSSVKSAGGGGGIGANDASICTTESTSQSFEALSGNHGSRHSNGGSIGTSTNATATLHTQHEQHQQTTNHQHAANL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
-
80% Identity
-