Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000349065.1
Location
KB665555.1:127331-132227[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-25 1.8e-22 79.0 0.0 2 89 144 227 143 227 0.94
2 2 3.2 5.5e+03 -2.7 0.0 6 41 931 968 927 979 0.79

Sequence Information

Coding Sequence
ATGAATGGAGGCAGCAGCAGACACCCACAATCCTCTTCCAGCCTGAGTGCTGAGAATATTCCATGTCGAACTATTTCCGCTACCGATATCAGAGTGGCGAGTGTGGATGCGGATTGTCTAGACCAGCAGCAGCCTCAGCAACCGATGAACCATCACAATAATCCGCACCGACCACATATATCGCTGGATAAGTGCGATGATTTTCAATTCAATGTTCCGCCGGAAGCTCCTGTTTTCGAGCCGTCGGAGGAAGATTTTAAAAATCCCCTCGTGTACATCAACAAAATTCGTCCGACCGCAGAAAAGTTCGGAATTTGCAAAATTCGTCCACCGAGCTCCTGGCAGCCTCCCTTCACTGTGGATGTAGAAAAGCTGACCTTTACGCCACGCATTCAGCGGTTGAACGAACTGGAAGCGGAAACACGCATTAAACTTAACTTTCTCGATCAGATTGCCAAGTTTTGCGAGTTGCAAGGGACAACTCTCAAGATACCGATGGTGGAAAGAAAGCCGCTAGATCTGTACACCCTACATAAGATCGTTAATCAAGAAGGAGGCCTGGAAGTGGTTACAAAGGAGCGCAAATGGTCCAAAGTAGCATGTCGTATGGGCTACCAGCAAGGCAAGAGCGTTGGATCAAATCTGCGAACTCACTACGACCGATTGCTGTATCCGTTTGATGTGTATCGCTCGGGCAAGGTGGTGGATTTGGCAAACATTGACCCAGAGCCATCCGAAGACTGCGAGTATGAGCCGCACTGTATTGAGTCACGTCAACAGGTTCAACCTCCGATGACGGCAGCTCGTCGCTCCCAGCGGTTTGCCCAGCAACAGAACAACAGCAAACCCTCATCGACCACCGGAAGCAGTGCCGGTGGAAGTGTGCGTGGTTCATCCGACGAGATGTCTCCGAGCAAGAAAGAGTTGCGACACAGAAGCATGCTTGAGTTTGCGAGTAAATTAGCGGCCGCCGCCCGAGACCAAGCGGCAACAAACGGCGGTGCGTCGAAGGAGGAAAAAGTTGGAGTCGGTGGAACGCACGGTTACGATCCGATGGCAAAGTACATTTGTCATATGTGCAATCGTGGTGATGTCGAAGAATCGATGCTACTGTGCGACGGATGCGATGCTTCGTATCACACGTTCTGTCTAATGCCGCCGCTACAAGACATTCCGAAGGGAGACTGGCGCTGTCCTAAGTGCATCGTGGAGGAACACTCAAAACCGGTGGAAGCGTTTGGGTTTGAGCAGGCACAACGTGAGTACACACTGCAGCAGTTCGGCGAGATGGCTGATCAATTCAAATCGAACTACTTTAACATGCCGGTTCATCTCGTACCGACCGAGCTGGTGGAGAGAGAATTTTGGCGCATCGTATCATCTATTGACGAAGACGTGACGGTAGAGTATGGGGCCGACTTGCACACGATGGACCATGGCAGTGGATTTCCTACCAAGTCGTCGTCTCTTTCGTCCACTGATCAGGAGTATGCAGAGTCGAGCTGGAACCTCAATAATTTGCCCGTGCTTGACGAATCAATCCTTGGACACATTAATGCCGATATCAGCGGCATGAAGGTACCATGGATGTATGTTGGAATGTGCTTTGCCACGTTCTGTTGGCATAATGAGGACCACTGGAGTTACTCCATTAACTATTTGCACTGGGGAGAACCGAAAACATGGTACGGTGTGCCCGGCAGCCGAGCAGAAGATTTTGAGCTAGCGATGAAATCGGCTGCCCCGGAGTTGTTCCATTCGCAGCCGGATTTGCTGCACCAGCTGGTTACAATTATGAATCCCAACATTCTGATGAACGCCAACGTCCCTGTTTACCGGACGGATCAGCACGCGGGCGAATTTGTCGTAACATTCCCGCGTGCGTATCACGCCGGCTTTAACCAAGGATACAACTTCGCCGAGGCAGTCAATTTTGCGCCGGCTGATTGGATGAAGATGGGCAGAGAGTGCGTCAACCACTATTCAAAGTTGCGGCGGTACTGCGTATTTTCTCATGATGAGCTCGTTTGCAAGATGGCACTGGAACCAGACAGGCTGAATTTGGGTATTGCAACAGCATGCTATATCGATATGGCAGAGATGGTTGACACCGAGAAGAAACTACGAAAAAATCTTCTAGAATGGGGTGTATCGAATGCTGAACGGGAGGCATTTGAGCTGCTGACGGACGACGCTAGACAATGCGAGATTTGCAAAACTACCTGCTTCCTTTCGGCGGTGAATTGTAAATGCACCAAGAACCTGGCTTGTCTGCGCCATTTTGCTGAGCTGTGCGAATGCCCCCCGGAAAACCACACCCTCAAGTATCGGTACACACTGGACGAGTTGCCGTTGATGGTGCAAAAGTTGAAGGTAAAGGCAGAATCGTTTGAGAAATGGTTGTTCCGTGTGCGCGACGTTCTTGATCCATCGGTTGCGAGTAGCATTACACTCGAGGAATTGCAAAGCATAGCGCATGAAGCCGAAAGTCAAAAGTTCCCCAACAGCGTTATTCTGGAGCGTTTAAATCTGTCAATATTGGAGGCCCAGAAGTGCATTACGGTCATTCAGCAGCTTGATATTAATAAAATACGAACGCGCACGCGAAATTCTTTAGAGTGTGCCAAATACAAGCTGTCGATGGATGAGCTGGAGTTGTTCATCAACGAAATCAACAATCTCCGATGTGTAATTCGAGAGGGTGACAGTGTACGAGAGCTGCAGCGCATCGGGCAAGAATGGCTGCGCCAGGCAGATAAGGCATTGAAATTGCGCTTTAAGGATACGAATGTGCAGCAGCTGAATCAGCTGATCGAAGAAGGAAATGCGCTATGCATTGAGTTGCCGCAAATTGCGGAGTTGCGGGATCGACTTACGCAGTACAAATGGTATCGAGAGGTGCGAACCTTACGTGAAAATACGGTCGATCGCTTGTCGCTGGAGGAAATTAAAAAGCTCATCAATGAAGGAATGCGAATACTACCGCACACAGTATTAGAGAAGGAACTGTCACAGTTGCACGGTATTATGTTGCAGATTGTGGATTGGGAGCAATCTGCTAACCAATGCTTCAAAACGGAAACGCAGCATAAGATCAGCGAAATTGATAGTCTTCTAGAGCGTGCGCAAAATATCGAGGAGTTCTTGCCATTGGCCGGTCAGCTGAAAGACGCGTTGCATAAATCGAAGGAATGGTTACATGCGATCGAAACGCTAGAAAGTAGCAAAAATTATAACTTTTTCCACACACTCCAAAATCTGGCCAACCGCGCCAAGCTGCTGCCAGTAGAGGTGGAAAGCAAGCTGCTGTGTGAAACCATTTTCGGTACAACAACTGCGGGCGGTGGCTGCTACAATCGAAATGGTGGTCAGATGCTACTGTTCAACTCAATGGGTTTCATCGGGGCTAGTGGCGACGAGTGGCGCAATAAATCGTCTTTGCCTGCATCGTCGCAGAAGCGAAAAAGAAATGGTTCAATCTCCAATCTGGACGATCCGGTAATACCTGGTAGTGGAATGGAAACAATCATGAAAAAAATAAAGGAGGACAGTAGCATCGCCGAACAGGATAAGAGATTGCTGCGAGCTAAGCTGCTATTGGACTGGAACGAGTCGGATGGTGGCATGGGAACCAGCAGCGATAAAAACATGCTCGGACGCTACGACAATATGAAGCAGCAGCAGGAAAATCGTTTGAATTGTAGCAGTGGTTGCGATGTGGTTTATCATTGCGCCAAGTGCTACGAGATGGTGGCAAAAGCGAATGTGTTACGGAAGTATCGGCATAAGCAGCATCATCATCATTGCCGGCATCATGAAAGGCACAGCAAGGTAAAACAGGAGCAGAATCATCAGCAGCACAGTAATAGTAGTAGTTTGTCATCTATGGAACAATTGTTGCAAATGAAAACTTTAAGCGAGGATGATTTTCTTCCCGAGAAGGAAGGAGCAAGTGAAAGGACGACAACAGCTGAAGGAGGAAGCAGTTTTGACGATTTTTCCTTTAAATTTGGCGAACACGACGAAGCGGAAGACGAGCTAGACGACGAAGAGGCGGCAGATGAGGTTAAAGCAGAAGATGAGGACGAGGATGAGGAAGAAGCTGCCTGTCTTGGACCGCCGGGACGGAATGGGTGCCATGGTTGCAAACCGCCGGACGAAAAGGAACGGAAACCAAGTGCGTTGTTGCCGGCATGCACAAGCGCTAGAATAAAAGAGGAACCGCTAGACGATGTGGAGCACCTCGATGAAGAGGAAAGAGAGATGCGACACAGCTCTAAAGTCCCTGGTGGAGAAGGGGCCGTGACCGGTGCAACTAAAACCATCTGTCCCAAGAGCACTAGTCAACCGTTGGCAGTGGTGTCTGCAAATGGCAAAAGTCATGCCAACGGTGCCAACGGCGTTAGTACCTCTACGAACGCTTCTTATCCACCGCACGACCGGCAGCGACAAGAACACAACCCACAGAGCAATCTAACAAGCTTATGA
Protein Sequence
MNGGSSRHPQSSSSLSAENIPCRTISATDIRVASVDADCLDQQQPQQPMNHHNNPHRPHISLDKCDDFQFNVPPEAPVFEPSEEDFKNPLVYINKIRPTAEKFGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKVACRMGYQQGKSVGSNLRTHYDRLLYPFDVYRSGKVVDLANIDPEPSEDCEYEPHCIESRQQVQPPMTAARRSQRFAQQQNNSKPSSTTGSSAGGSVRGSSDEMSPSKKELRHRSMLEFASKLAAAARDQAATNGGASKEEKVGVGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEEHSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSLSSTDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNANVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLSMDELELFINEINNLRCVIREGDSVRELQRIGQEWLRQADKALKLRFKDTNVQQLNQLIEEGNALCIELPQIAELRDRLTQYKWYREVRTLRENTVDRLSLEEIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDSLLERAQNIEEFLPLAGQLKDALHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEVESKLLCETIFGTTTAGGGCYNRNGGQMLLFNSMGFIGASGDEWRNKSSLPASSQKRKRNGSISNLDDPVIPGSGMETIMKKIKEDSSIAEQDKRLLRAKLLLDWNESDGGMGTSSDKNMLGRYDNMKQQQENRLNCSSGCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSKVKQEQNHQQHSNSSSLSSMEQLLQMKTLSEDDFLPEKEGASERTTTAEGGSSFDDFSFKFGEHDEAEDELDDEEAADEVKAEDEDEDEEEAACLGPPGRNGCHGCKPPDEKERKPSALLPACTSARIKEEPLDDVEHLDEEEREMRHSSKVPGGEGAVTGATKTICPKSTSQPLAVVSANGKSHANGANGVSTSTNASYPPHDRQRQEHNPQSNLTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2