Basic Information

Gene Symbol
Kdm5
Assembly
GCA_943734865.1
Location
CALSEK010000071.1:189978-196130[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-25 4.4e-22 78.1 0.0 2 89 221 304 220 304 0.94

Sequence Information

Coding Sequence
ATGAAAAATAAGTCGAAAAATTCTTTGACGAacggaagtggcagtagcagcagcagcagcagcagcagcaatagcagtggcagtgggagtgagaattaccCCAACGGCAGCACGTATGGGTCCTCCGGAGCAACAGCGATGACCGCCGCTGCGACAGGAGTGGGAGCGGGCAGTGCTTCCGCTGGGTCCATGAACGGAGGTAGCAGACATCTTCAATCCTCCGCTGGCATAAGTGCTGGAAACACCGCAGGTGGATCTATTTCCATCACAGACGTTGGTGCATCCGACCTGGTTGCTGATGGTGCCGATGAGCAGCAACCGACGAGCTATCACAATCATAATGCTCAACACAATAATCGCAACCATTTGTATCAGCAGCAAAAACAGGGTGGCAGCAATCGACCACATATATCGCTCGACAAGTGTGATGATTTTCAATTCAATGTTCCACCGGAAGCGCCAGTGTTTGAGCCGTCGGAGGAAGATTTTAAAAATCCACTTGTGTACATCAACAAGATACGTCCGACGGCCGAAAAGTATGGAATCTGCAAAATACGTCCACCGAGATCCTGGCAGCCTCCCTTCACCGTGGATGTAGAAAAGCTGACATTTACGCCGCGCATACAGCGCCTGAATGAGCTGGAAGCCGAAACACGCATCAAGCTGAACTTTCTCGACCAAATTGCCAAATTTTGCGAACTGCAAGGAACGACCTTGAAGATACCGATGGTCGAGCGCAAGCCGCTCGATCTGTACACCTTGCACAAGATCGTAAACCAGGAGGGTGGACTGGAGATAGTAACGAAGGAACGCAAATGGTCGAAAGTAGCGTGCCGTATGGGCTACCAGCAGGGGAAAAGTGTTGGATCCAATCTACGAACTCACTATGACCGTTTGCTCTATCCGTTCGATGTGTATCGTTCGGGGAAGGTGGTGGATTTGGCCAACATCGATCCGGAGCCTTCGGAAGATTGCGAGTATGAACCGCATTGCATCGAGTCCCGTCAACAGGTGCAGCCTCCTATGACGACAACGGCTCGCCGTTCTCAACGGTTTGCCCAGCAACAGAGCAACAGCAGCAAGCCTACTTCAACTACCGGAAGTAGTGCTAGTGGTAGTGTTCGCGGCTCGTCGGATGAAATGTCCCCAGGCAAGAAAGAACTCCGACATAGGAGCATGCTGGAGTTTGCGAGCAAGCTGGCTGCTGCGGCCCGGGAACAGGCGGCCAGCAATGGGAGCACGTGGAAGGAGGAGAAAAGTGCCGCCGGCGGTGGAACACATGGATACGATCCGATGGCCAAGTACATTTGTCACATGTGCAATCGAGGTGACGTCGAGGAATCGATGCTGCTGTGCGACGGATGTGATGCGTCGTACCATACGTTCTGTCTAATGCCACCGTTGCAGGATATTCCGAAGGGCGACTGGAGATGCCCAAAGTGTATTGTGGAGGAAAATTCGAAGCCGGTGGAAGCGTTCGGGTTCGAACAAGCGCAGCGTGAGTACACACTGCAGCAGTTTGGCGAGATGGCTGATCAGTTCAAGTCGAACTACTTCAACATGCCGGTGCACCTTGTACCGACGGAGCTGGTGGAGAAGGAATTTTGGCGAATTGTTTCCTCGATCGATGAGGATGTAACCGTCGAGTATGGGGCCGATTTGCACACGATGGATCATGGTAGTGGGTTTCCGACCAAATCGTCACCATATATTACGTCCAGCGATCAGGAGTATGCCGAATCAAGCTGGAACCTCAACAACTTGCCTGTGCTGGACGAATCAATCCTGGGCCACATTAATGCCGATATCAGTGGCATGAAGGTACCGTGGATGTACGTCGGTATGTGCTTTGCCACGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCGATCAACTATCTGCACTGGGGTGAACCGAAAACGTGGTACGGTGTGCCGGGGAGCCGGGCCGAAGAATTTGAACTGGCCATGAAATCGGCTGCCCCCGAACTGTTCCACTCGCAGCCGGATTTGCTACACCAGCTGGTGACGATTATGAATCCTAACATTCTGATGAATGCCGACGTTCCCGTGTACCGGACGGATCAGCACGCGGGCGAATTTGTCGTAACATTCCCGCGTGCGTACCATGCCGGCTTTAACCAGGGATACAACTTTGCCGAGGCGGTCAACTTTGCGCCCGCAGATTGGATGAAGATGGGCCGGGAGTGCGTCAACCATTACTCGAAGTTGAGGCGGTACTGTGTGTTTTCGCACGACGAGCTCGTCTGCAAGATGGCACTGGAGCCGGACAGACTAAATCTAGGAATTGCGACTGCGTGCTATATCGATATGGCGGAAATGGTTGATACGGAGAAGAAACTGCGAAAGAATCTGCTAGAATGGGGTGTATCCAACGCAGAACGGGAAGCATTCGAATTACTGACAGACGACGCTAGGCAGTGCGAAATCTGCAAAACGACCTGCTTCCTGTCGGCTGTTAACTGTAAATGTACCAAGAACCTGGCCTGTCTGCGCCATTTTGCCGAGCTGTGCGAATGTCCGCCGGAAAACCACACGCTCAAGTATCGCTACACGCTGGACGAACTGCCGCTGATGGTGCAGAAGCTCAAGGTGAAAGCAGAATCGTTTGAAAAGTGGTTATTCCGCGTGCGTGACGTGCTAGATCCGTCAGTCGCAAGCAGCATCACACTAGAGGAGCTGCAAAGCATTGCGCACGAAGCGGAAAGTCAAAAGTTTCCGAACAGTGTCATCTTGGAGCGCCTGAACCTGTCCATCCTGGAGGCGCAGAAGTGCATTACGGTAATTCAGCAGCTGGATATAAATAAAATACGCACGCGTACTCGTAATTCGCTCGAGTGTGCCAAGTACAAGCTGACGATGGACGAGCTGGAGCTGTTTATCAATGAAATCAACAATCTGCGGTGTGTTATTCGCGAAGGTGACAGCGTCCGGGAGTTGCAGCGCATCGGCCAGGAATGGTTACGCCAGGCAGATAAAGCGTTAAAGTTACGCTTTAAGGACACGAATGTGCAGCAGCTAAATCAGCTGATCGAGGAAGGAAATGGGTTGTGTATCGAGCTGCCACAAATTACGGAGCTGAAGGATCGGTTGACGCAGTACAAATGGTATCGGGAGGTGCGAACATTACGCGAAAATACGGTCGATCGACTTTCGCTGGAGGAAATCAAGAAGCTCATCAACGAAGGCATGCGAATACTACCGCACACAGTATTAGAGAAAGAGCTGTCCCAGTTGCACGGTATTATGCTGCAGATTGTCGATTGGGAGCAGTCCGCTAATCAGTGCTTCAAAACGGAAACGCAACACAAGATCAGCGAAATCGATAGTCTTCTTGAGCGGGCGCAAAACATCGAGTCATTCTTGCCACTGGCCGGTCAACTGAAGGACGTGCTGCACAAATCGAAGGAATGGTTGCATGCGATCGAAACGCTAGAAAGTAGCAAAAATTACAACTTTTTCCACACACTCCAAAATCTGGCGAATCGGGCCAAACTGCTCCCGGTAGAGATGGAAGGCAAATTGCTGTGCGAGAACATTTTTGCTACAACGACTGCCGGTGGCGGTTGCTTCAATCGGCACGGGGGTCAAATGTTGCTGTTCAACTCGAGAGGATTTATCGGGGCTAGTGGTGAGGAATGGCGCAGCAAATCGTCCACATCTCCTTCCACCTCGCTGAAACGGAAACGGAACGGATCCATCTCGAACTTGGATGATCCAATCATTCCTGCTAGAGATTTAGAAACAATTGTGAAAAAAATCAAGGAGGAAAGTAACATTGGGGAGCAGGATAAACGATTGCTGAGGGCACAACTGCTGCTAGGTTGGAACGAATCGGACGGAGGATTAGCAAGCAGCGGTGACAAACACGTGCTAGGAAGCTACGACAGTGTGCAACAGCAGCAGCATCATCCAAATAGCAGTGGTTGCGATGTCGTTTATCATTGCGCCAAGTGCTACGAGATGGTGGCCAAAGCGAACGTGTTAAGAAAGTATCGTCACAAGCAGCATCACCATCATTGCCGGCATCATGAGCGGCATAGTAGGGCAATGGTTGTAAAGCAGGAGCAGAATCAAGAACAGACTACTAATACCGGGAATCTGTCCGCCATGGAACAACTGTTGCAGATGAAAATATTAAGTGAGGATGACTTTGCTGTCGTCAAAGGAACAACGACGACCGACACAGCCGGAAGCAGTTTTGACGATTTTTCATTTAAATTTGGTGAACATTACGATGGGGAAGATGAGCCAGACGACGAAGAAGCGGCCGATGAGGTGAAAGCAGAAGACGATGACGATGATGAGGAGGAGGCTGGCGGTGGTGTCGTACAGCTCGGGAGGAATGGGTGCCATGGCTGTAAACCACCGGACGAACATGAGCGAGATACGAGCGTTTTAAAACCTTTGCTAGCAGCGTGCACGCCCGGTCGCAGAATAAAGGCGGAACCGCTCGATAATGTTGAGGACGCTGAAATAACGCGGTACAGTGGTTCTAAGGATGCAACCAATCTTTCCCCAGAGAGCACTAGTCAAGCATCATCGGAATCGCCAACGGCGGCGAATGGTGGTGGAAGCCGTAATTCCAGCGGATCGAACGGCATTAGCACCTCGACAAATGTCTCTCAACAGCATGATCGACATCGACAAGAACAACACCAACAGACTAAGGTAGAAAACTTATGA
Protein Sequence
MKNKSKNSLTNGSGSSSSSSSSSNSSGSGSENYPNGSTYGSSGATAMTAAATGVGAGSASAGSMNGGSRHLQSSAGISAGNTAGGSISITDVGASDLVADGADEQQPTSYHNHNAQHNNRNHLYQQQKQGGSNRPHISLDKCDDFQFNVPPEAPVFEPSEEDFKNPLVYINKIRPTAEKYGICKIRPPRSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEIVTKERKWSKVACRMGYQQGKSVGSNLRTHYDRLLYPFDVYRSGKVVDLANIDPEPSEDCEYEPHCIESRQQVQPPMTTTARRSQRFAQQQSNSSKPTSTTGSSASGSVRGSSDEMSPGKKELRHRSMLEFASKLAAAAREQAASNGSTWKEEKSAAGGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSPYITSSDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEEFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNADVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINNLRCVIREGDSVRELQRIGQEWLRQADKALKLRFKDTNVQQLNQLIEEGNGLCIELPQITELKDRLTQYKWYREVRTLRENTVDRLSLEEIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISEIDSLLERAQNIESFLPLAGQLKDVLHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMEGKLLCENIFATTTAGGGCFNRHGGQMLLFNSRGFIGASGEEWRSKSSTSPSTSLKRKRNGSISNLDDPIIPARDLETIVKKIKEESNIGEQDKRLLRAQLLLGWNESDGGLASSGDKHVLGSYDSVQQQQHHPNSSGCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSRAMVVKQEQNQEQTTNTGNLSAMEQLLQMKILSEDDFAVVKGTTTTDTAGSSFDDFSFKFGEHYDGEDEPDDEEAADEVKAEDDDDDEEEAGGGVVQLGRNGCHGCKPPDEHERDTSVLKPLLAACTPGRRIKAEPLDNVEDAEITRYSGSKDATNLSPESTSQASSESPTAANGGGSRNSSGSNGISTSTNVSQQHDRHRQEQHQQTKVENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
iTF_00108164;
80% Identity
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