Basic Information

Gene Symbol
Kdm5
Assembly
GCA_000473375.1
Location
KI423047:26996-32025[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-25 8.7e-22 77.0 0.0 2 89 147 230 146 230 0.94
2 2 5.8 1.4e+04 -3.8 0.0 7 41 936 972 932 977 0.75

Sequence Information

Coding Sequence
ATGAGTGGTGGAAATTCGCCGAGCGGATCGGTTGGCAACGCCGACGCCGGAGCATCCGGGTTGGGTGGAGATTGTGCCGATGAGCACCTAGATCCGACAGCGATGAACTATCACAACCATAATGCTCATCACAATAATCGGAGCCATTTGTATCAGCAGCAAAAGCAGGGTAGTAATCGGCCGCACATATCGCTCGACAAGTGCGACGATTTTCTGTTCAACGTACCGCCGGAAGCTCCTGTTTTCGAGCCGTCGGAGGAGGATTTCAAAAATCCCCTTGTGTACATCAACAAAATACGCCCGACGGCGGAAAAGTATGGAATCTGCAAAATTCGACCCCCAAGCTCCTGGCAGCCTCCCTTCACCGTGGATGTGGAAAAGCTAACCTTTACACCACGCATCCAGCGGCTGAACGAATTGGAAGCGGAAACACGCATCAAGTTGAACTTTCTCGATCAAATTGCCAAATTTTGCGAGCTCCAAGGAACAACGCTGAAGATACCGATGGTCGAACGCAAACCGCTCGATCTTTACACGCTGCACAAGATCGTAAACCAGGAGGGTGGCTTGGAGGTCGTAACCAAGGAGCGCAAATGGTCCAAAGTGGCTTGTCGCATGGGCTACCAGCAGGGCAAGAGTGTCGGATCAAATCTACGCATTCACTACGACCGGTTGCTTTATCCGTTCGATGTATATCGTTCCGGGAAGGTGGTAGATTTGGGCAACATCGATCCGGAACCGTCGGAGGATTGCGAGTATGAGCCGCACTGCATTGAGTCCCGCCAGCAGGTGCAACCCCCGATGACGGCAGCACGCCGTTCGCAACGCTTTGCCCAGCAGCAGAGCAACAGCAAACCGTCGTCGACTGCGGGCAGCAGTGCTGGCGGCAGTGTACGCGGTTCATCGGATGAAATGTCACCGAGCAAGAAGGAGCTGCGACACAGGAGTATGCTGGAGTTTGCGAGCAAACTGGCGGCAGCCGCTCGTGAACAAGCGGCCAGCAATGGGAGTGCATCGAAGGAGGAGAAAAGTGCCGTGGGTGGAACGCATGGGTACGATCCGATGGCAAAGTACATCTGTCACATGTGCAATCGGGGTGATGTGGAAGAATCGATGCTCCTGTGCGATGGATGCGATGCGTCGTACCATACGTTCTGCCTAATGCCACCGTTGCAGGACATTCCGAAGGGCGATTGGCGTTGCCCGAAGTGTATTGTGGAGGAAAACTCCAAACCGGTGGAAGCGTTCGGGTTCGAGCAAGCGCAACGTGAGTACACGCTGCAGCAGTTCGGCGAGATGGCCGATCAGTTCAAGTCGAACTACTTCAACATGCCGGTCCATCTCGTGCCGACCGACCTGGTGGAGAAGGAATTTTGGCGCATCGTGTCCTCAATCGACGAGGACGTGACGGTTGAGTATGGGGCCGATTTGCACACGATGGACCATGGCAGTGGGTTCCCGACCAAAGCGTCACCGTATCTCACGGCGAACGATCAGGAGTATGCCGAATCGAGCTGGAACCTCAACAACTTGCCAGTGCTGGACGAATCGATCCTCGGGCACATCAATGCCGACATCAGCGGTATGAAGGTACCGTGGATGTACGTCGGCATGTGTTTTGCGACGTTTTGCTGGCACAACGAGGATCACTGGAGCTACTCGATCAACTATCTGCACTGGGGTGAGCCGAAAACGTGGTACGGTGTGCCGGGCAGCCGGGCAGAAGATTTCGAGCTGGCAATGAAATCGGCTGCCCCGGAGCTGTTCCATTCGCAGCCCGATTTGCTGCACCAGCTGGTGACGATCATGAACCCGAACATACTGATGAACGCGAACGTGCCGGTCTATCGGACGGATCAGCATGCGGGTGAGTTTGTCGTCACATTCCCGCGTGCGTACCATGCCGGCTTTAATCAGGGCTACAACTTTGCGGAGGCGGTCAATTTTGCGCCCGCGGATTGGATGAAGATGGGCCGGGAGTGTGTCAATCACTACTCGAAGCTGCGCCGGTACTGTGTGTTTTCGCACGATGAGCTCGTTTGCAAGATGGCGCTGGAACCGGACAGGCTTAATTTGGGCATTGCGACAGCGTGCTACATCGATATGGCGGAAATGGTTGATACGGAGAAAAAGCTACGCAAGAATCTTTTGGAATGGGGCGTATCGAATGCTGAACGGGAAGCGTTCGAGTTGTTGACAGATGACGCTAGGCAGTGTGAAATTTGCAAAACCACTTGCTTCCTGTCGGCCGTAAATTGTAAGTGTACGAAGAACCTGGCCTGTCTGCGCCATTTCGCCGAACTGTGCGAATGTCCACCGGAAAACCACACACTCAAGTACCGGTACACGCTGGACGAGTTGCCGCTGATGGTGCAGAAGCTTAAGGTGAAGGCGGAATCGTTCGAAAAGTGGTTGTTCCGCGTGCGTGACGTGCTGGATCCGTCGGTGGCGAGCAGCATCACGCTCGAGGAGCTGCAGAGCATTGCGCACGAGGCGGAAAGCCAAAAGTTCCCCAACAGTGTCATACTGGAGCGATTGAACCTTTCCATACTGGAGGCCCAGAAGTGCATTACCGTCATACAGCAGCTGGATATTAATAAAATACGCACGCGCACGCGAAATTCGCTCGAGTGCGCCAAGTACAAGCTGTCGATGGACGAGCTGGAGCTGTTTATCAATGAGATCAACAATCTGCGGTGCGTTATACGGGAGGGTGATAGTGTGCGTGAGCTGCAGCGCATCGGTCAGGAATGGTTGCGCCAGGCGGATAAAGCATTGAAGCTGCGCTTCAAGGACACCAACGTGCAGCAGCTGAACCAGCTGATTGAGGATGGGAATGCGCTGTGCATTGAGCTGCCGCAAATAACCGAGCTGAAGGATCGGCTGACGCAGTACAAATGGTACCGGGAGGTAAGAACGTTGCGGGAGAACACGGTCGATCGGTTGTCGCTGGAGGAAATCAAGAAGCTCATTAACGAAGGGATGCGAATACTACCGCACACAGTATTAGAGAAGGAGCTGTCCCAGTTGCATGGTATTATGCTGCAGATCGTTGATTGGGAGCAGTCGGCTAACCAGTGCTTCAAGACGGAAACGCAACACAAGATCAGTGCACTCGATAGTCTGCTCGAGCGTACGCAAAACATCGAAGCATTTTTGCCATACGCTGGCCAGCTGAAGGATATGCTGAACAAGTCGAAGGAATGGTTGCATGCGATCGAAACGCTGGAGAGTAGCAAAAATTACAACTTTTTCCACACACTCCAAAACCTGGCGAACCGCGCCAAGCTGCTGCCGGTGGAGATGGAAAGCAAGCTGCTGTGTGAAACCATCTTCGGCACGACGACCGCCGGCGGGTGCTGTTACAATCGTAACGGTGGCCAAATGCTGCTGTTCAACTCGCACGGTTTCATCGGAGCGAGCGGTGACGAATGGCGCAGCAAAGCGGCCACATCACCGTCCACCTCGCTGAAGAGGAAACGCAACGGATCGATCTCCAACCTGGACGATCCGGTAATACCGGCCCGTGGGCTGGAAACGGTTATGAAGAAAATCAAGGAGGATAGCAACATTGGGGAACACGATAAGAGATTGCTGAGGGCAAAGCTGCTGCAGGACTGGAACGAAACGGATGGTGGGTTGGGAAGCAGCAGCGACAGACACACGGTTGGACGATACGACACTGCGCACCGACAGCAACAGCAGCAACATCGTCTCAATGGTAGCGGTTGCGACGTCGTGTATCATTGCGCCAAGTGCTACGAGATGGTGGCGAAAGCGAACGTGCTGCGAAAGTATCGCCACAAGCAGCATCACCATCACTGCCGGCATCACGAACGGCACAGTAGTAGTAGGGTGGTGGCTATGAAGCAGGAGCAGAATCAGCAGCAGCCCCCTGCAAACGCGAGCAACGTATCCGCCATGGAGCAATTGTTGCAGATAAAAACGCTGTGCGAGGAAGATTTTGGCGTCGAAAATGGCACAAGCGAACGGACGGCGGCTGCGGAGGGTGATAGTAGTTTTGATGATTTTTCGTTTAAATTTGCTGAACACGACGACGGGGATGATGAGCCggacgatgaggaggtggcggacgaggtgaaggccgaggatgaggacgatgatgacgaggaggaggaAGCTGCCGGTGTCGGACAGCTGGGAAGGAACGGGTGCCATGGCTGTAAACCACCGGACGAACACGAGCGAACCACGGACGTGCTGAAACCCTTGCTCGCATCTCCCGGTGGCAGAATCAAGCAGGAACCGTTGGACAGCGTGAAGGAAGAGGCTCACGGTCGCTACGGTTCGAAAGGTACCGGCGCCgggggaggggggTCTGTGCTGGCGGCCACAACGCTCAATCTGGAGAGCACTAGTCAAGCATTGGTAGCGCTAGCAGCAAACGGAAGCCGGAGTTCCAACGGATCCGGAGCGAACGGTGTCAGCGGTACGAAGAACACGTCGCCCCAATCCGACCGCCAGCGGCAGGAACAACACCAACAGAGCAATGTGGAAAGCTTATGA
Protein Sequence
MSGGNSPSGSVGNADAGASGLGGDCADEHLDPTAMNYHNHNAHHNNRSHLYQQQKQGSNRPHISLDKCDDFLFNVPPEAPVFEPSEEDFKNPLVYINKIRPTAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKVACRMGYQQGKSVGSNLRIHYDRLLYPFDVYRSGKVVDLGNIDPEPSEDCEYEPHCIESRQQVQPPMTAARRSQRFAQQQSNSKPSSTAGSSAGGSVRGSSDEMSPSKKELRHRSMLEFASKLAAAAREQAASNGSASKEEKSAVGGTHGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTDLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKASPYLTANDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFHSQPDLLHQLVTIMNPNILMNANVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTKNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLSMDELELFINEINNLRCVIREGDSVRELQRIGQEWLRQADKALKLRFKDTNVQQLNQLIEDGNALCIELPQITELKDRLTQYKWYREVRTLRENTVDRLSLEEIKKLINEGMRILPHTVLEKELSQLHGIMLQIVDWEQSANQCFKTETQHKISALDSLLERTQNIEAFLPYAGQLKDMLNKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPVEMESKLLCETIFGTTTAGGCCYNRNGGQMLLFNSHGFIGASGDEWRSKAATSPSTSLKRKRNGSISNLDDPVIPARGLETVMKKIKEDSNIGEHDKRLLRAKLLQDWNETDGGLGSSSDRHTVGRYDTAHRQQQQQHRLNGSGCDVVYHCAKCYEMVAKANVLRKYRHKQHHHHCRHHERHSSSRVVAMKQEQNQQQPPANASNVSAMEQLLQIKTLCEEDFGVENGTSERTAAAEGDSSFDDFSFKFAEHDDGDDEPDDEEVADEVKAEDEDDDDEEEEAAGVGQLGRNGCHGCKPPDEHERTTDVLKPLLASPGGRIKQEPLDSVKEEAHGRYGSKGTGAGGGGSVLAATTLNLESTSQALVALAANGSRSSNGSGANGVSGTKNTSPQSDRQRQEQHQQSNVESL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106232;
90% Identity
iTF_00101478;
80% Identity
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