Basic Information

Insect: Zophobas morio
Gene Symbol: L
Assembly: GCA_027724725.1
Location: JALNTZ010000010.1:3406609-3416092[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.044 2.7 9.8 0.7 1 23 81 103 81 103 0.98

2 20 0.27 16 7.3 4.8 1 23 109 131 109 131 0.97

3 20 2.7e-06 0.00016 23.0 3.2 1 23 137 159 137 159 0.99

4 20 0.00041 0.024 16.2 0.3 1 23 165 187 165 187 0.99

5 20 8.2e-05 0.0049 18.4 0.9 1 23 209 232 209 232 0.97

6 20 0.046 2.8 9.7 0.1 2 23 259 281 258 281 0.95

7 20 0.029 1.8 10.4 0.3 1 23 316 339 316 339 0.96

8 20 0.022 1.3 10.8 0.0 3 23 444 464 443 464 0.97

9 20 0.0026 0.16 13.7 2.5 3 23 474 495 472 495 0.90

10 20 0.11 6.8 8.5 0.8 1 23 500 523 500 523 0.95

11 20 0.0018 0.11 14.1 4.6 1 23 588 611 588 611 0.97

12 20 3.7 2.2e+02 3.8 0.9 1 23 658 681 658 682 0.83

13 20 0.00013 0.0079 17.7 2.6 2 23 693 714 692 714 0.97

14 20 0.0084 0.5 12.1 0.9 1 23 723 745 723 745 0.98

15 20 8.5 5.1e+02 2.6 0.6 3 23 754 774 753 774 0.95

16 20 2.3 1.4e+02 4.4 0.9 3 14 822 833 820 835 0.90

17 20 0.48 29 6.5 0.0 2 23 879 900 878 900 0.90

18 20 0.0021 0.12 14.0 0.3 2 23 909 930 908 930 0.95

19 20 0.016 0.95 11.2 0.0 1 23 938 960 938 960 0.96

20 20 0.077 4.6 9.0 1.6 1 23 967 989 967 989 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.044	2.7	9.8	0.7	1	23	81	103	81	103	0.98
2	20	0.27	16	7.3	4.8	1	23	109	131	109	131	0.97
3	20	2.7e-06	0.00016	23.0	3.2	1	23	137	159	137	159	0.99
4	20	0.00041	0.024	16.2	0.3	1	23	165	187	165	187	0.99
5	20	8.2e-05	0.0049	18.4	0.9	1	23	209	232	209	232	0.97
6	20	0.046	2.8	9.7	0.1	2	23	259	281	258	281	0.95
7	20	0.029	1.8	10.4	0.3	1	23	316	339	316	339	0.96
8	20	0.022	1.3	10.8	0.0	3	23	444	464	443	464	0.97
9	20	0.0026	0.16	13.7	2.5	3	23	474	495	472	495	0.90
10	20	0.11	6.8	8.5	0.8	1	23	500	523	500	523	0.95
11	20	0.0018	0.11	14.1	4.6	1	23	588	611	588	611	0.97
12	20	3.7	2.2e+02	3.8	0.9	1	23	658	681	658	682	0.83
13	20	0.00013	0.0079	17.7	2.6	2	23	693	714	692	714	0.97
14	20	0.0084	0.5	12.1	0.9	1	23	723	745	723	745	0.98
15	20	8.5	5.1e+02	2.6	0.6	3	23	754	774	753	774	0.95
16	20	2.3	1.4e+02	4.4	0.9	3	14	822	833	820	835	0.90
17	20	0.48	29	6.5	0.0	2	23	879	900	878	900	0.90
18	20	0.0021	0.12	14.0	0.3	2	23	909	930	908	930	0.95
19	20	0.016	0.95	11.2	0.0	1	23	938	960	938	960	0.96
20	20	0.077	4.6	9.0	1.6	1	23	967	989	967	989	0.97

Sequence Information

Coding Sequence: ATGAAAATGCTATTCAAAGGAAACAGTAGTCGACTGGAATTGTTGATAGAAAAAATTCAGTCGACGAAGGAAAACGGAGAATTCAAAGTCCCAGTAGCTGAAGATGAAACTGCCGCCAGTTCTGCATCCGGTGATGGTTCTGGATGTGGCGAAACCGTACAGGGTTTTGATGATCTTGTCCAAGGGTCGGAAGAACGAGTGCATCAGGGAGATCAAGATAAAGACACTAAACCGGGCCCATACAAATGCACGGTATGTGGAGAAAATTATTTGAAGGAAAAACAGCTCAGGGAGCACGAGCAGAGTCACACAGATCACCTGCAATTCACGTGTGCTTATTGCCCTCGACTTTTCAAGCATAAGCGTTCAAGAGATCGACATACAAAACTCCACACTGGAGATAAAAAGTACAAGTGTCAGCAGTGCGATTCTGCTTTTTCACGAAGTGATCATCTTAAAATTCATATGAAAACACACGATAGTCGTAAACCATACAAATGTGGTACATGCAATAGGGGTTATAACACCGCTGCAGCTCTGTCATCCCACCAACAAAGTCATTTGAAGCAAGAATCTAGATCCGGAAGCCGCACAAGTGGAGGAAGCACCCCTAGTCCGGGACTTTTCCGGTGTACTCATTGCACTGAAACTTTCGGAAAAGCGGATCTGTTGCAGAATCACATGGCGATGGTCCACAGCGACACCGATTCTTCGTTGAGTCAAACTCCGGAACCGCTGTCCGAGTATCAAAACCAAATAGACGACTTGAAAATAGTTTGTATGTACTGTTCTAAAGAGTTTCCAAGTCTGGATTTAATGTACCAACACACGAACATTGCTCACCGCGATGTCCCCAATGGTGTTTCCACTTCAGTTTCTGCCTCCTCTCCCGTAGTCGTTCAGAGCTCACCAAAACACGAGATTTGTCAAAATGGAACACCAACTTACGCCTGTGATAAATGCACAATGCAGTTAGACTCTTTACAAAACTTGAAAAACCATATAAATAACGTTCATTGGCGTCCCACGTTATCACCAAACCCTATCAAAGACTACGGAAACTTCATGGCGGTGGAAAAAAGCTATTCGCCGTTTCAAACCCAGCCGACGGATTTGAGTCGGAAGAAGAAGAACGAAGACAGTATCGATAAGATGATCAAAAAGAAGAAGCAAGACCATCAGCATTCACCGACGACTATAAGTCCGTATGATTCCAACGACAAGCCATGTATTTGTTCGTGTTGCTACGCGCAGTTGCCAAATTTCAAGAGTTTTCTTCACCATATGGAATCTCACGTGATCTCGTCAAACAATTCTTTACTAGGATTTTGCCCGGTTTGTGGCGAACCTGGACGTGACCCAGTTTCTTTTACTAACCACATCTTCAGCCACGCTATTGCTCAAGTACCTGGTCGTTGTTGTTACACTTGTAAAAAGTCGTTCGAACGGTTAGAAGAACTACAAAAACATCTGCTGGATGTACACGTAGTTTCAGTTTTCAAGTGCTCGATATGTAACGACATATTTGATACCAAAATTTCGATGCAGTTGCATCTGTCAAATAAGCATAGTGACGAATGTAAACATTTTAAATGTTATTTGTGCACTAATCAGGTGTTCCATGATAGACTGTCTGCGGAACTGCATATATCGATGAAACATTATCAACAGTTCACACCGTGTGTTGGCACAAATCAGTCGCTTCTACGGTCGCAGTACCAAACAGAACTGGATGCGAGGTTCAGAGAATATAACTTGATTTTCCAGTGCACTTTCTGCCATAAGACTTTCAAAGACCAGTACTCACAGTACGTTCATATTTTAAAGGAGCACAATGAAGCTAAAGAGAGTGAAAAATTTATTTTGGATTCGACATTGAATCAAAATCCGTCCAGATCTCCCAATTTCATGTTTCCAAAGATCGTAACTCCGGATCATGTGGGTATGGACACGACCAGCATGGAGACGATGTACACTTGTGATATATGTAACCGTAATGACTTGACGTCAGAGGCAGATTTGATAAGTCACAAGAAGGTCCACCACAGCAAGAACAAAATCGGTCCTGTTAGCCTACAATGCGCGTATTGTAATGAGTATTGTAAATCAAGGAGCGACTTGGAAAACCACATGAAAACTCATCAAGTGAGTTGCGGGAAAGGAAAGCACAAGTGTAACATCTGCGACGAGATTTATTCATCGACTTTGACGTTGGCAGACCACAAACTCACACACTGTAAAATAGTTGAAGGGAATAGTTGTGTTCAATGTAAATCCGTTTTGAGTGACGAACAATCATTTTACAATCATCAGCTGCAACACAGTAATAGTCCAGCAAAACCAAATTCGCAAATATCTTTGCCAGCGAATTGCATTATCTGTTGCCAAACTTTACAGACTGATGTGGAAATAAAGTTACACGCGAAATTTCATTTGAAACATTTAACACAAAAAGAATGTTTGTGTGGAGTGTGCAACAAAGTTTTCGATAGTCAAAGCGGTCAGGTCGTGAATAATTTCGAAAAGACGCCCGACAACATCAGCATTTTTTTGTGTAAAGACTGTAATACGAAAAATAATGGAAGCATTTCGGATTGCGATGTTAAAAAAGTGTCGACCCCGGGAAAACAGTTCGCTTGTATCCAGTGTCCACAAACATTTGACAGTGAAAGTGAGGTTCAAAGTCATGCAGCGATGCACATGTTAAACGAAGGAACTAACTTAGAGTGTAAACTGTGCAAGCAAGTTTTCTCATCTCCACTCAAACTTCAGACGCATTTAATCGAGCACAATTTTTATGGAATGAATCAATATAGTTGTTACGTGTGTTCTTCGGTTTTTACTGCCGCAAGCGGACTGCAGAACCATATTATAGGCCATGGCTTGGACAGCAGACCTTATGAATGTTCGCAATGCCAAATGAAATTTTTCTTTAGAGCTGAGTTAGATAATCACCGATTTGTTCATTTACTCCAGACACCGACGAGTCAAAAATCCTATTCAACCCCCAACGGTGTCGAAATCTTGTACGATAGTAAATCCAGTCCTCACTACAAAATTTGCAAATATTGTTCAAATTCGTACTTGGATAACTCATTTTTCTTAGAACATTTAAATCAGTGTCCCTTCAAGATAAGTCCAAAGCGAGAAAATTTTGATACAACTACAAATGATGTAGACAATAATATAAAGCAAGAGGTTACAGAAATCACGTCGGATGGCGTTATTGAAAAAGATGAGCAATAA
Protein Sequence: MKMLFKGNSSRLELLIEKIQSTKENGEFKVPVAEDETAASSASGDGSGCGETVQGFDDLVQGSEERVHQGDQDKDTKPGPYKCTVCGENYLKEKQLREHEQSHTDHLQFTCAYCPRLFKHKRSRDRHTKLHTGDKKYKCQQCDSAFSRSDHLKIHMKTHDSRKPYKCGTCNRGYNTAAALSSHQQSHLKQESRSGSRTSGGSTPSPGLFRCTHCTETFGKADLLQNHMAMVHSDTDSSLSQTPEPLSEYQNQIDDLKIVCMYCSKEFPSLDLMYQHTNIAHRDVPNGVSTSVSASSPVVVQSSPKHEICQNGTPTYACDKCTMQLDSLQNLKNHINNVHWRPTLSPNPIKDYGNFMAVEKSYSPFQTQPTDLSRKKKNEDSIDKMIKKKKQDHQHSPTTISPYDSNDKPCICSCCYAQLPNFKSFLHHMESHVISSNNSLLGFCPVCGEPGRDPVSFTNHIFSHAIAQVPGRCCYTCKKSFERLEELQKHLLDVHVVSVFKCSICNDIFDTKISMQLHLSNKHSDECKHFKCYLCTNQVFHDRLSAELHISMKHYQQFTPCVGTNQSLLRSQYQTELDARFREYNLIFQCTFCHKTFKDQYSQYVHILKEHNEAKESEKFILDSTLNQNPSRSPNFMFPKIVTPDHVGMDTTSMETMYTCDICNRNDLTSEADLISHKKVHHSKNKIGPVSLQCAYCNEYCKSRSDLENHMKTHQVSCGKGKHKCNICDEIYSSTLTLADHKLTHCKIVEGNSCVQCKSVLSDEQSFYNHQLQHSNSPAKPNSQISLPANCIICCQTLQTDVEIKLHAKFHLKHLTQKECLCGVCNKVFDSQSGQVVNNFEKTPDNISIFLCKDCNTKNNGSISDCDVKKVSTPGKQFACIQCPQTFDSESEVQSHAAMHMLNEGTNLECKLCKQVFSSPLKLQTHLIEHNFYGMNQYSCYVCSSVFTAASGLQNHIIGHGLDSRPYECSQCQMKFFFRAELDNHRFVHLLQTPTSQKSYSTPNGVEILYDSKSSPHYKICKYCSNSYLDNSFFLEHLNQCPFKISPKRENFDTTTNDVDNNIKQEVTEITSDGVIEKDEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00639791; iTF_00415377; iTF_00870835; iTF_00167832; iTF_01283672; iTF_01330049; iTF_01481165; iTF_01480361; iTF_00753246; iTF_00853071; iTF_01278430;
90% Identity: iTF_00753246; iTF_00415377;
80% Identity: -