Basic Information

Insect: Eledona agricola
Gene Symbol: L
Assembly: GCA_964023215.1
Location: OZ026862.1:11951238-11966242[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.033 3 8.8 0.5 1 23 75 97 75 97 0.97

2 20 0.095 8.6 7.4 4.8 1 23 103 125 103 125 0.97

3 20 9.7e-07 8.9e-05 23.1 3.2 1 23 131 153 131 153 0.99

4 20 0.00014 0.013 16.2 0.3 1 23 159 181 159 181 0.99

5 20 7.5e-05 0.0068 17.1 0.4 1 23 203 226 203 226 0.97

6 20 0.07 6.3 7.8 0.0 2 23 253 275 252 275 0.92

7 20 0.062 5.6 7.9 0.8 1 23 309 332 309 332 0.96

8 20 0.0077 0.7 10.8 0.0 3 23 431 451 430 451 0.97

9 20 0.0003 0.027 15.2 2.7 3 23 461 482 459 482 0.91

10 20 0.038 3.4 8.6 0.7 1 23 487 510 487 510 0.95

11 20 0.00083 0.076 13.8 4.7 1 23 575 598 575 598 0.97

12 20 5.9 5.4e+02 1.7 1.8 1 23 645 668 645 669 0.72

13 20 0.0002 0.018 15.8 2.7 2 23 680 701 679 701 0.97

14 20 0.003 0.27 12.1 0.9 1 23 710 732 710 732 0.98

15 20 1.4 1.3e+02 3.7 0.4 3 23 741 761 740 761 0.95

16 20 1.9 1.8e+02 3.2 0.9 3 13 809 819 807 821 0.87

17 20 1.3 1.2e+02 3.8 0.0 2 23 867 888 866 888 0.89

18 20 0.0061 0.56 11.1 0.3 2 23 897 918 896 918 0.95

19 20 0.13 12 6.9 0.0 1 23 926 948 926 948 0.94

20 20 0.029 2.6 9.0 1.6 1 23 955 977 955 977 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.033	3	8.8	0.5	1	23	75	97	75	97	0.97
2	20	0.095	8.6	7.4	4.8	1	23	103	125	103	125	0.97
3	20	9.7e-07	8.9e-05	23.1	3.2	1	23	131	153	131	153	0.99
4	20	0.00014	0.013	16.2	0.3	1	23	159	181	159	181	0.99
5	20	7.5e-05	0.0068	17.1	0.4	1	23	203	226	203	226	0.97
6	20	0.07	6.3	7.8	0.0	2	23	253	275	252	275	0.92
7	20	0.062	5.6	7.9	0.8	1	23	309	332	309	332	0.96
8	20	0.0077	0.7	10.8	0.0	3	23	431	451	430	451	0.97
9	20	0.0003	0.027	15.2	2.7	3	23	461	482	459	482	0.91
10	20	0.038	3.4	8.6	0.7	1	23	487	510	487	510	0.95
11	20	0.00083	0.076	13.8	4.7	1	23	575	598	575	598	0.97
12	20	5.9	5.4e+02	1.7	1.8	1	23	645	668	645	669	0.72
13	20	0.0002	0.018	15.8	2.7	2	23	680	701	679	701	0.97
14	20	0.003	0.27	12.1	0.9	1	23	710	732	710	732	0.98
15	20	1.4	1.3e+02	3.7	0.4	3	23	741	761	740	761	0.95
16	20	1.9	1.8e+02	3.2	0.9	3	13	809	819	807	821	0.87
17	20	1.3	1.2e+02	3.8	0.0	2	23	867	888	866	888	0.89
18	20	0.0061	0.56	11.1	0.3	2	23	897	918	896	918	0.95
19	20	0.13	12	6.9	0.0	1	23	926	948	926	948	0.94
20	20	0.029	2.6	9.0	1.6	1	23	955	977	955	977	0.97

Sequence Information

Coding Sequence: ATGAAAATGCTCTTCAAAGGCAACAGCAGTCGCCTGGAACTGCTGATCGAAAAAATACAATCGACTAAAGAAAGCGGGGAATTTAAAGCTCCAGTTGCTGAAGATGAAACTGCTGCCAGTTCGGCGTCTGGTGGCGAAACTGTACAAGGATTTGATGATCTTGTCCAAGGGTCCGAAGAACCAGTACAGGGAGATCGAGATCGAGATACTAAACCAGGTCCATACAAATGTACGGTATGTGGAGAAAATTACTTAAAAGAAAAACTGCTCCGGGAGCACGAACAGAGCCATACGGACCATCTCCAATTCACCTGTGCATACTGTCCGAGACTGTTCAAACACAAACGATCCAGAGACCGTCATACAAAGCTCCACACCGgagataaaaaatacaaatgtcAACAATGCGATTCGGCGTTTTCCCGAAGtgatcatcttaaaattcacatGAAAACGCATGACAGTCGTAAGCCGTATAAATGCGGTACATGCAATAGGGGTTATAACACAGCGGCGGCCCTCTCATCCCATCAGCAAAGTCACTTAAAGCAAGAATCTAGGTCCGGAAGCCGCACGAGTGGAGGAAGCACCCCCAGTCCTGGACTTTTCCGGTGCAGCCATTGTGCGGAGACTTTCGGAAAACCGGATCTTCTTCAGAACCACATGGCAATGGTGCATAGCGACACCGACTCATCTCTGAGTCAAACTCCTGAACCGTTATCCGAGTACCAAAACCAAATCGAAGACTTAAAAATAGTCTGCATGTACTGCTCCAAAGAATTTCCGAGTTTGGATCTAATGTACCAACACGCCAGCATCGCCCATCGCGACGTCCCTAATGGTGTTTCAACTTCCGTTTCTCTTCCATCTCCGGTGGTTCAAAGCTCACCGAAGCAAGAAATTTGCCAAAACGGAACACCCACATATGCCTGTGATAGATGCACAATGCAGTTGGACTCAGTTCACAATCTCAAAAACCACATAAACAACGTACACTGGCGTCCCGCTTTGTCTCCAAATCCCGTTTTCGTGGGACTTGAGAAGAGTTACTCGCCGTTCCAGACCCAACCAACAGATCTGAGCAGAAAGAAGAAGATTGAAGGCAATTCTGATAAGTTcttgaagaagaagaaacaCGACCATCAGCACTCCCCTGCGATTAGTCCATACGATTCCAACGACAAACCTTGTATTTGTTCGTGCTGCTACGCGCAATTGCCCAACTTCAAAAGTTTTCTGCATCATATGGAGTCGCACGTGATCTCTTCAAACAACTCCTTGTTAGGGTTTTGTCCAGTTTGTGGAGAACCTGGACGGGACCCCGTTTCCTTCACCAATCACATATTTAGCCACGCCATTGCTCAAGTACCTGGACGATGTTGTTACACTTGCAAGAAGTCATTTGAACGGTCCGAAGAGTTACAGAAGCATCTTTTAGAAGTACATGTGGTATCGGTGTATAAGTGTTCCATCTGTAATGATATCTTTGACACTAAAATCTCCATGCAACTACATTTGACTAATAAACACAGCGATGAGTGTAAACACTTTAAATGTTATTTGTGCACCAACCAAGTTTTCCACGATAGACTCTCTGCGGAATTGCATATTTCCATGAAGCACTATCAACAATTCACTCCTTGTCTTGGAACGAATCAGTCGCTTCTAAGATCTCAGTACCAAACAGAACTTGATGTGAGGTTTAGAGAGTATGGTATGGTTTTCCAGTGCAACTTCTGCCACAAATCTTTCAAGGATCAGTACTCACAATATTTGCATATTCTCAAAGAACACAACGAATCTAAAGAGGGAGAGAAATTCATTCTGGATTCAACTGTAAACCACAATCCGTCCAGGTCGCCCAATTTCATGTTCCCAAAAATTTTGACACCGGACCACGTAGGAATGGAATCGTCCAACTTGGATACAATATACACGTGTGATATTTGCAATCGCAACGATATAACTTCGGAATCCGACATGATCAACCACAAGAAGATTCATCACAGTAAGAACAAAATAGGGCCAGTGAGTCTTCAGTGCGCTTACTGCAACGAGTACTGCAAATCTAGAACAGACTTGGAAAATCACATGAAGACCCACCAAGTTACTTGCGGGAAGGGCAAACACAAGTGTAACATTTGCGACGAGATTTACTCTTCCACTTTAACTCTCGCCGACCATAAGTTGACCCATTGCAAAATCGTTGAAGGGAACAGTTGTGTTCAATGTAAGACGGTTCTGGTGGACGAGCAATCGTTCTACTCCCATCAACTTCAACACAGCAACAACGCGACCAAGTCCAATTCGCAAATATCCCTGCCTGCCAATTGCATCATTTGCTGCCAAACGCTACAAACCGACGTGGAGATAAAACTCCACGCCAAGTTCCACCTAAAGCATCTGACCCAAAAGGAGTGCCTGTGCGGTGTGTGCAACAAAGTTTTCGACAGCCAAAACGGCCAAATTGTGAGCAGTTTTGAAAAGACGTCCGAGAACTTAAACGTGTCGCTATGTAAGGATTGCCACGCCAAAAACAGTTCGCGAAAAAACGGGTCGGAAAGTGATTCAAAGAAAGTGAGTCCAGGGAAGCAATTTGCTTGCATCCAGTGTCCTCAAACTTTCGAAAGTGAAATCGAAGTGCAAAACCACGCCGCCATGCACATGCTAAACGAAGGCACCAACTTGGAATGTAGACTCTGCAGACAAGTATTTTCGTCTCCTCTCAAGCTACAAACTCATCTCATCGAACATAACTTCTATGGAATGAATCAATATAGCTGCTATGTTTGCTCGTCCGTGTTTACTGCCGCCATTGGCTTGCAGAACCATATTGTCGGGCATGGTTTGGACAGCAGACCCTACGAATGCTCCCAATGCCAAATGAAATTTTTCTTCAGAGCCGAGCTGGATAATCACCGATTTATCCACATTCTACAAACTCCAACCCAAACGAGCAACGGTGTTGATCTCTATGAAAACAAAACGAGTCCCCATTATAAGATTTGTAAATATTGTTCGAATTCCTATTTGGACAACACCTTCTTCCTGGAACACTTGAACCAGTGTCCGTTCAGAGTAAGTCCAAAGCGCGAGAATTTTGATACAATCATAAACGATGCAGACAATAAtataaaacaagaaataaatGAAACCGGTTCGGAAGTCGTTATCGAGAAAGATGAGCAATAA
Protein Sequence: MKMLFKGNSSRLELLIEKIQSTKESGEFKAPVAEDETAASSASGGETVQGFDDLVQGSEEPVQGDRDRDTKPGPYKCTVCGENYLKEKLLREHEQSHTDHLQFTCAYCPRLFKHKRSRDRHTKLHTGDKKYKCQQCDSAFSRSDHLKIHMKTHDSRKPYKCGTCNRGYNTAAALSSHQQSHLKQESRSGSRTSGGSTPSPGLFRCSHCAETFGKPDLLQNHMAMVHSDTDSSLSQTPEPLSEYQNQIEDLKIVCMYCSKEFPSLDLMYQHASIAHRDVPNGVSTSVSLPSPVVQSSPKQEICQNGTPTYACDRCTMQLDSVHNLKNHINNVHWRPALSPNPVFVGLEKSYSPFQTQPTDLSRKKKIEGNSDKFLKKKKHDHQHSPAISPYDSNDKPCICSCCYAQLPNFKSFLHHMESHVISSNNSLLGFCPVCGEPGRDPVSFTNHIFSHAIAQVPGRCCYTCKKSFERSEELQKHLLEVHVVSVYKCSICNDIFDTKISMQLHLTNKHSDECKHFKCYLCTNQVFHDRLSAELHISMKHYQQFTPCLGTNQSLLRSQYQTELDVRFREYGMVFQCNFCHKSFKDQYSQYLHILKEHNESKEGEKFILDSTVNHNPSRSPNFMFPKILTPDHVGMESSNLDTIYTCDICNRNDITSESDMINHKKIHHSKNKIGPVSLQCAYCNEYCKSRTDLENHMKTHQVTCGKGKHKCNICDEIYSSTLTLADHKLTHCKIVEGNSCVQCKTVLVDEQSFYSHQLQHSNNATKSNSQISLPANCIICCQTLQTDVEIKLHAKFHLKHLTQKECLCGVCNKVFDSQNGQIVSSFEKTSENLNVSLCKDCHAKNSSRKNGSESDSKKVSPGKQFACIQCPQTFESEIEVQNHAAMHMLNEGTNLECRLCRQVFSSPLKLQTHLIEHNFYGMNQYSCYVCSSVFTAAIGLQNHIVGHGLDSRPYECSQCQMKFFFRAELDNHRFIHILQTPTQTSNGVDLYENKTSPHYKICKYCSNSYLDNTFFLEHLNQCPFRVSPKRENFDTIINDADNNIKQEINETGSEVVIEKDEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568303;
90% Identity: -
80% Identity: -