Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: L
Assembly: GCA_951805265.1
Location: OX638209.1:6778435-6788711[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00077 0.052 14.2 0.8 1 23 77 99 77 99 0.99

2 19 0.11 7.6 7.3 4.8 1 23 105 127 105 127 0.97

3 19 1.1e-06 7.8e-05 23.1 3.2 1 23 133 155 133 155 0.99

4 19 0.00017 0.012 16.2 0.3 1 23 161 183 161 183 0.99

5 19 0.00026 0.018 15.6 0.4 1 23 205 228 205 228 0.94

6 19 0.021 1.4 9.7 0.2 2 23 255 277 254 277 0.93

7 19 0.012 0.83 10.4 0.2 1 23 309 332 309 332 0.96

8 19 0.013 0.85 10.3 0.0 3 23 439 459 438 459 0.97

9 19 0.0013 0.086 13.5 1.9 3 23 469 490 467 490 0.89

10 19 0.0018 0.12 13.0 0.7 1 23 495 518 495 518 0.95

11 19 0.0016 0.11 13.1 3.2 1 23 583 606 583 606 0.97

12 19 0.91 62 4.5 1.9 1 23 653 676 653 677 0.89

13 19 0.00024 0.016 15.8 2.7 2 23 688 709 687 709 0.97

14 19 0.00088 0.06 14.0 1.1 1 23 718 740 718 740 0.98

15 19 0.2 14 6.5 0.3 3 16 817 830 815 832 0.90

16 19 0.12 8.3 7.2 0.1 2 23 872 893 871 893 0.90

17 19 0.00091 0.062 13.9 0.4 2 23 902 923 901 923 0.95

18 19 0.0096 0.65 10.7 0.0 1 23 931 953 931 953 0.96

19 19 0.032 2.2 9.0 1.6 1 23 960 982 960 982 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00077	0.052	14.2	0.8	1	23	77	99	77	99	0.99
2	19	0.11	7.6	7.3	4.8	1	23	105	127	105	127	0.97
3	19	1.1e-06	7.8e-05	23.1	3.2	1	23	133	155	133	155	0.99
4	19	0.00017	0.012	16.2	0.3	1	23	161	183	161	183	0.99
5	19	0.00026	0.018	15.6	0.4	1	23	205	228	205	228	0.94
6	19	0.021	1.4	9.7	0.2	2	23	255	277	254	277	0.93
7	19	0.012	0.83	10.4	0.2	1	23	309	332	309	332	0.96
8	19	0.013	0.85	10.3	0.0	3	23	439	459	438	459	0.97
9	19	0.0013	0.086	13.5	1.9	3	23	469	490	467	490	0.89
10	19	0.0018	0.12	13.0	0.7	1	23	495	518	495	518	0.95
11	19	0.0016	0.11	13.1	3.2	1	23	583	606	583	606	0.97
12	19	0.91	62	4.5	1.9	1	23	653	676	653	677	0.89
13	19	0.00024	0.016	15.8	2.7	2	23	688	709	687	709	0.97
14	19	0.00088	0.06	14.0	1.1	1	23	718	740	718	740	0.98
15	19	0.2	14	6.5	0.3	3	16	817	830	815	832	0.90
16	19	0.12	8.3	7.2	0.1	2	23	872	893	871	893	0.90
17	19	0.00091	0.062	13.9	0.4	2	23	902	923	901	923	0.95
18	19	0.0096	0.65	10.7	0.0	1	23	931	953	931	953	0.96
19	19	0.032	2.2	9.0	1.6	1	23	960	982	960	982	0.97

Sequence Information

Coding Sequence: atgaaaatgttatttaagGGTAACAGCAGTCGACTCGAGTTGCTCATCGAGAAAATTCAGTCCACCAAGGAGAGCGCCGAATTTAAAGTGCCAGTGACCGAAGATGAGACTGCTGGCAGTTCGGGTTCTGGTGGGTCTGCATCGGGGGAAACCGTGCACGGCTTTGAGGAACTAGTCCAAGGGTCCGAAGAGCCCTTGCATGGAGATCAAGATAGCAAGCCGGGCCCGTACAAATGCACGGTATGTGgagcaaattattataaagaaaGACAGCTCAGGGACCACGAACAgACTCACACCGACCATCTTCAATTTACTTGCGCTTACTGCCCCAGACTTTTTAAGCACAAGAGGTCCAGGGATCGACACACCAAGCTCCACACCGGAGACAAAAAGTACAAGTGCCAGCAATGTGATTCAGCCTTCTCCAGAAGTGATCATCTTAAAATTCACATGAAAACGCACGACAGTCGCAAGCCCTACAAATGTGGCACATGCAATCGAGGCTACAATACCGCCGCAGCACTATCATCACATCAACAGAGCCATTTGAAGCAAGAATCCAGGTCCGGAAGCCGAACAAGTGGGGGAAGTACCCCAAGTCCGGGACTGTTCCGGTGTAATCACTGCACCGAAATTTTCGGGAAACCCGACCTCCTGCAGAACCACATAGCACTGATGCATAGCGACACAGATTCAACCTTGAGTCAAACCCCCGAACCCCTAACTGAATACCAGTCACAAATcgaagatttaaaaatagtttgcaTGTATTGTTCCAAAGATTTTTCAAGTCTCGACTTGATGTACCAACACACCAGTATCGCGCATCGTGACGTCCCTAACGGATCAACCCTTTCGATACCCTcaccaaatttgcaaaattctccAAAGCCCGAAATTTACCAAAACGGAACCCCAACATACGCTTGCGATCGATGCACAATGCAATTCGAATCGGTCCAAAATCTCAAGGAACACGTCAACTCCGTACATTGGAGACCGACAATTTCGCCGAATCCCATGAAAGATTACGGTTTCGGCGTCATCCAAAGTCTCGCCCTCGAAAAAAGCTACTCGCCCTTCCAAACTCAACCAACAGATCTGAGTCGCAAGAAGCGAAAAGACGAAACCGTCGAGAAATcgacaaagaagaaaaaacaagaacTTTCACCCACCACTGTTAGTCCTTACGATTCTAACGATAAACCCTGCATTTGTTCCTGTTGCTACGCTCAATTacccaattttaaaagtttcctTCATCACATGGAAACTCATATGGTGTCAACCAACAACTCTCTCCTGGGGTTTTGTCCGGTTTGCGGGGAACCAGGAAGAGATCCCGTTACCTTCACCAATCACATCTTCAGCCACGCCATCGCTCAAGTACCTGGACGTTGCTGTTACGCCTGCAAGAAATCCTTCGAGAGATCCGACGAGTTACAGAAACATCTCTTGGACGTTCACGTGGTTTCTGTCTTCAAATGCTCGATCTGCAACGAGATTTTTGATAGCAAAATTTCCATGCAGcTGCATTTGTCGAATAAGCATAGCGATGAGTGCAAACATTTCAAGTGTTACTTGTGCACGAATCAAGTGTTTCACGATCAACTCTCGGCCGAACTCCATATTTCCATGAAGCACTACAACCAGTTTGCGCCTTGCATGGGAACTAACCAGACGCTCCTGAGGCCCCAATACCAAATGGAGTTGGATGCCCGGTTGCGGGAATATGGTTTGGTCTTCCAGTGCACCTTCTGCCGGAAGTCGTTCAAGGACCAGTACTCGCAATACATGCACATTCTGAAGGAACACGGCGAGTCTAAGGAGGGTGAGAAGTTTGTTTTGGATCAGCACCAGAATCCGTCCAGGTCTCCAAGTTTCATGTTTCCGAAGCTCCTGTCGTCGCCCGAAAGCAGCAAACTGGATACAAGTTCCGTCGAAACAGCAGCCTTCACTTGTGATATTTGTAATCGTACCGACTTAACATCCGATTCCGACTTGCAAACCCACAAAAAGCTCCACCATGCGAAAAGTAAAGTAGGTCCAGTAAGTCTGCAATGTGCTTACTGCAACGAGTACTGCAAATCCCGGACTGACTTGGAGAATCACATGAAAACCCACCAAGTCACTTGTGGAAAAGGCAAACACAAATGCAACATTTGCGACGAAATTTTCACATCGACATTAACGTTAGCTGACCATAAATTGACACATTGCAAGATAGTTGAAGGGAATAATTGTGTTCAATGCAAATCGGTTCTGACAGACGAGCAGTCTTTTTACACCCACCAGTACCAGCACAGCAACAGTCCGGCTAAGCCGAATTCACAGATTTCTTTGCCTGCAAACTGCATCATTTGCTGCCAAACCCTTCAAACTGACGTCGAAATTAAGCTGCACGCCAAGTTTCATTTGAAGCATCTCTTGCAGAAAGAGTGTTTGTGCGGGGTTTGCAAGAAAGTCTTCGATAGCCAAAGCGGTTTAGTTATTGGAAATTTGGAGAAAAGTTCGGAAAATAttagcgttttcttatgtaaagaTTGCAGTTCGAAGAACAGCAACGGTAGTGAGTGCGATGTTAAAAAAGTGTCGCCTGGCAAGCAGTTTGCTTGCATCCAGTGCCCCCAAACTTTTGATAGTGAGAGTGATGTTCAGAATCACGCAACAATGCACATGTTAAACGAAGGAACTAATTTAGAGTGTCGTCTCTGTAAACAAGTGTTTTCCTCGCCGTTCAAGCTGCAAACTCATTTGATTGAACACAACTTTTACGGGATGAACCAATACAGTTGTTATGTGTGTTCTTCGGTTTTTACTGCGGCAAGTGGGTTACAAAGCCACATCATTGGACATGGTTTAGGTAGCAGACCGTACGAGTGCTCCCAATGCCAGATGAAATTCTTTTTTAGAGCCGAATTGGATAATCATCGATTTGTTCACGTCATGCAGTCGCCGGTTCAGAAAAACTATCCTTTATCTAATGGAGTTGAGGCTTTGTACGAAAAGAATCAGCAATACAAAGTTTGCAAATTCTGCTCCAACTCTTTCCTGGACAATTCATTTTTCTTGGAGCACCTCAATCAATGCCCTTTTAGAATAAGCCCCAAACAGGAAACGTTTGATTTAGCCGGAAACGATGTtgacaataatataaaacaagaAGTTACGGAGATCACGTCGGAACTCATCATTGACAAAGAGGAGCAATAA
Protein Sequence: MKMLFKGNSSRLELLIEKIQSTKESAEFKVPVTEDETAGSSGSGGSASGETVHGFEELVQGSEEPLHGDQDSKPGPYKCTVCGANYYKERQLRDHEQTHTDHLQFTCAYCPRLFKHKRSRDRHTKLHTGDKKYKCQQCDSAFSRSDHLKIHMKTHDSRKPYKCGTCNRGYNTAAALSSHQQSHLKQESRSGSRTSGGSTPSPGLFRCNHCTEIFGKPDLLQNHIALMHSDTDSTLSQTPEPLTEYQSQIEDLKIVCMYCSKDFSSLDLMYQHTSIAHRDVPNGSTLSIPSPNLQNSPKPEIYQNGTPTYACDRCTMQFESVQNLKEHVNSVHWRPTISPNPMKDYGFGVIQSLALEKSYSPFQTQPTDLSRKKRKDETVEKSTKKKKQELSPTTVSPYDSNDKPCICSCCYAQLPNFKSFLHHMETHMVSTNNSLLGFCPVCGEPGRDPVTFTNHIFSHAIAQVPGRCCYACKKSFERSDELQKHLLDVHVVSVFKCSICNEIFDSKISMQLHLSNKHSDECKHFKCYLCTNQVFHDQLSAELHISMKHYNQFAPCMGTNQTLLRPQYQMELDARLREYGLVFQCTFCRKSFKDQYSQYMHILKEHGESKEGEKFVLDQHQNPSRSPSFMFPKLLSSPESSKLDTSSVETAAFTCDICNRTDLTSDSDLQTHKKLHHAKSKVGPVSLQCAYCNEYCKSRTDLENHMKTHQVTCGKGKHKCNICDEIFTSTLTLADHKLTHCKIVEGNNCVQCKSVLTDEQSFYTHQYQHSNSPAKPNSQISLPANCIICCQTLQTDVEIKLHAKFHLKHLLQKECLCGVCKKVFDSQSGLVIGNLEKSSENISVFLCKDCSSKNSNGSECDVKKVSPGKQFACIQCPQTFDSESDVQNHATMHMLNEGTNLECRLCKQVFSSPFKLQTHLIEHNFYGMNQYSCYVCSSVFTAASGLQSHIIGHGLGSRPYECSQCQMKFFFRAELDNHRFVHVMQSPVQKNYPLSNGVEALYEKNQQYKVCKFCSNSFLDNSFFLEHLNQCPFRISPKQETFDLAGNDVDNNIKQEVTEITSELIIDKEEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568303;
90% Identity: iTF_01283672;
80% Identity: -