Basic Information

Insect: Tetragonula hockingsi
Gene Symbol: znf423
Assembly: GCA_010645185.1
Location: WIUV01012149.1:3123-6977[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.3e-05 0.0042 18.5 0.4 1 23 10 32 10 32 0.99

2 18 0.00045 0.084 14.4 0.9 1 23 186 209 186 209 0.95

3 18 0.1 19 7.0 0.1 2 23 220 242 219 242 0.88

4 18 0.16 30 6.4 0.1 3 23 306 326 305 326 0.97

5 18 0.043 8 8.2 0.7 1 23 337 359 337 359 0.96

6 18 0.011 2.1 10.0 0.3 1 23 368 391 368 391 0.92

7 18 2.9 5.5e+02 2.4 0.2 1 23 396 419 396 419 0.91

8 18 4.2 7.9e+02 1.9 0.3 10 23 451 465 449 465 0.93

9 18 0.078 15 7.4 2.0 2 23 493 514 493 514 0.96

10 18 0.0077 1.4 10.5 0.2 1 23 519 542 519 543 0.94

11 18 0.96 1.8e+02 3.9 0.1 2 23 605 628 604 628 0.83

12 18 0.00014 0.027 16.0 1.1 2 23 644 666 643 666 0.96

13 18 0.032 6.1 8.6 1.0 1 23 675 698 675 698 0.93

14 18 2.3 4.3e+02 2.7 0.3 5 23 709 727 705 727 0.84

15 18 0.00094 0.18 13.4 0.3 2 23 882 904 881 904 0.95

16 18 0.98 1.8e+02 3.9 0.4 2 23 955 976 954 976 0.94

17 18 0.37 69 5.2 0.1 2 23 985 1007 984 1007 0.93

18 18 0.018 3.3 9.4 3.1 1 23 1014 1037 1014 1037 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.3e-05	0.0042	18.5	0.4	1	23	10	32	10	32	0.99
2	18	0.00045	0.084	14.4	0.9	1	23	186	209	186	209	0.95
3	18	0.1	19	7.0	0.1	2	23	220	242	219	242	0.88
4	18	0.16	30	6.4	0.1	3	23	306	326	305	326	0.97
5	18	0.043	8	8.2	0.7	1	23	337	359	337	359	0.96
6	18	0.011	2.1	10.0	0.3	1	23	368	391	368	391	0.92
7	18	2.9	5.5e+02	2.4	0.2	1	23	396	419	396	419	0.91
8	18	4.2	7.9e+02	1.9	0.3	10	23	451	465	449	465	0.93
9	18	0.078	15	7.4	2.0	2	23	493	514	493	514	0.96
10	18	0.0077	1.4	10.5	0.2	1	23	519	542	519	543	0.94
11	18	0.96	1.8e+02	3.9	0.1	2	23	605	628	604	628	0.83
12	18	0.00014	0.027	16.0	1.1	2	23	644	666	643	666	0.96
13	18	0.032	6.1	8.6	1.0	1	23	675	698	675	698	0.93
14	18	2.3	4.3e+02	2.7	0.3	5	23	709	727	705	727	0.84
15	18	0.00094	0.18	13.4	0.3	2	23	882	904	881	904	0.95
16	18	0.98	1.8e+02	3.9	0.4	2	23	955	976	954	976	0.94
17	18	0.37	69	5.2	0.1	2	23	985	1007	984	1007	0.93
18	18	0.018	3.3	9.4	3.1	1	23	1014	1037	1014	1037	0.97

Sequence Information

Coding Sequence: ATGAAGACGCATGACACTCAAAAGCCGTATCAGTGCACAACCTGTTCCAGAGGTTACAACACAGCAGCTGCGCTAACGTCCCACATGCAATCTCACAAGAAACATCATCAATCTCAAACATCCAAACTCCAGGACATCGACTACGGTAGAAGAAGTGTATCTTCTCACAGTACATCATCGCCGCCAATACCAAGCTCTCCATCGCCATCTCTAAATATAGTCTTAAATTCGAAAACTGGTATGAAAAATACTCAAGGAAGTGCTTCGACAACTCCGATTCTGAGCTCTCCACTGAAATTAGCTTGCATGTATTGTACCAGAGATACCTTCAGTTGCATGCAACAACTTCAGATGCACGTGCATACGATGCATCAAGCTATCTTAAGTGGAGAAACTGTTGCAGTATCTCCATCAACTAACAGAACCAATGAACAAATAAGTTATCAGCATGGAAAAACTTTTGACAGAAAGCCAGAAGGATCGTCTAAAGAACACAAAAGGAAATATCAAGATGATTCAGAAAAATCTATTGAGAAAGATCACTATGAAAACGCATTTACATGCAGTCAATGTACTATGAGATTCTCTACGTTAAACTCATTGAGAGATCATTTGGTTTCGATTCATAGAACCGATGGTTTTTGTTCTGCTTTGATGATGTGTCCTCTTTGTGGCATTCCTTGCACTTCTGCAGCGACTTATGCAGAACACTATGTTCTCCAACACtgtgaaaatcgaagaacaGGTCTCCTAGAAATTAGAGACTATACAGATTCTAAGATGAATGGAAATTATGACACCAAGAGTCAGACCAGAAGTCAGAAATGTAAGGAGCAAACGTCTTCTGAGCCAGCTGATTTGACTAACAAGCATTCCACCGgtacagaaaataattatacagcTGGTACATTGTTATGTGGACAGTGTGGAGCTGCTTTAAAGGACTTTGAATCATTCAGGGAACACTTAGCTAGACATCTTCAAGCTGATCATAGAAATGATGTTAGACACCCTTGTTTAAAGTGTGAAGCCACTTTTCAAGATAGGGAAGACATGTTGGTACATTTGACGAAACATTATTTGGGCCAGATTAGTAAAGAATATGCTTGTGGCGCATGTAAAAAACTTTATCCTCATCCTGATCTTCTTCAGAGACATTTACTCGACAGTCATGCTCATCATCTCTATCGATGCGCCTTGTGCAGAGATACTTTTGATTCTAGAGTGGCAATACAGGTCCATTTTGCTGTGAAACACAGTCAAGAATGCAGAATCTATAGATGCAATGCTTGCACAGTGtctaataatgaaaattcgtcAGGAAATGCGccagaagaaggaaaaagtttcttccgaAGTGAGTCTGAAATGACAAACCATGTAAGAAATGTCCACGCACCTCCTACGATGTCAAATAATAGTCCTGTGGCTAGGAGTCCTGCCTCCACTCCAGGAATAACTGGAAATTCCGGACCAAGATGCGTCTTCTGTGGAATCTGTTGTAGTTCCGAGCTGGAATTACAACTCCATTTGGCCAGCCATTCTGCTAACTTGTATAGATGTCCTGTTTGTAGAGAAGGATTTgccgtggaatttttattagacaGACATATTACTCAAGCACATCATTCTAATGACCATCAGGATGTCATGAGGAGTAGAGAGAATGGAAGAATTGGTAGATTACCAAGATTACAGGAAGAGGCCAAGTCCCAGAAAAGAGGTCGCTCTCCAGCCTCCAGCAATAACAACTCTCTGAATCAACGTGACAACAACAATAAACGTCCAAATTACACTAATGCATCTTCTCAACAATGCGATCTCTGCGAAAGAGGAGAGTTTTCCAACGAAGCAGAACTTCAAGCTCACAAAAAATTGGTTCACACTCCGACCAAGTTTCAAAATAAGTCTGTATCAAGTCTTAGCATGACTTGCGCATACTGTGGAGAAGTATGTCGTTCTAGAACTGATCTGGAATCTCATACAAGGATTCAACATGCATCGAATGAACCTGGAGGACGCCACAAGTGTAATATTTGTGACGAAGTGTGTCCATCAGGAGCAACACTTGCAGAACATAAACTGCAGAAACATTGTAAGATTCAATTAAGTGACACGTGTATCGTTTGTCGAGGAAACCTATCTTCAGAATCACAGTTTCTAGAACATATGCAAAGACACAGTCTGGAGAATGTGGATCCTCAGCAAAGATTAGACGGTTCTCTTCCCCATCTTCCTGCAGCTTGTGTAGTTTGTAGACAGACATTGATCAGTGATTTGGAATGTCGTCTCCATGCCAGACACCACTTAAAAACTTCTGGCTCTCACAGTGTAGCATCCAGCCCCAGTCCGAATCAAAAGAATCAGAGTCCAAGTTGTTGTCTTTGTTTAAGAGATTATTCAGCTGATGACTTTGTTAATTTACCTCCAAGTCATATAAGTGGAGGAGGACAGTCTTTAAAGGTTTGCAAATCTTGTTACGTTCGACACTCTCAGGGTCTACCTATTTTGAATTCACCTTACGAGCCTATTAAATGTGATGCTTCTTGGACATCCAATAATAAAGATAGACAATGGGATAAATCAAAGGATAAATGGGAAACCGAGAatgaagaagataaaaatgagAGGCATGATAGTAAGAAGTGTCAAGATTGTGGggtgaaatttgaagattctGACAAGGTGGAAAAACATAGGATAGTCGAGCATGAAAAAGTTATGAGTGGAGTTATGTTGAACACATACACATGTATACAGTGTCAggtaataaaaatgTCGTTCCCAACAGAGGCAAAGATTCAGCaacatgtaaaaaaagaacatctAGAAACATCGGGAAGGACTTCCATAGAAACATTACGATGTCATCTGTGTCTTTTTGAAGCTAGCAGTCCATTGCAATTGCAAAGTCATTTGATAGAACATACTTTCGCAGGATGTGCTGCTCTCAGTTGTTACATTTGCCAATCTCTCTTCACCGCACCTATTGGTCTTCAGAATCATATGCTTCAAGAACACGGCCTAAGTGCTCGTCCCTATGATTGTTCCCAATGTACACTTAAATTCTTCTTCAGAGCAGAACTAGATCATCATATGTTAACATTTCATCGACCGAGAGACATGCCATCACCCAGTGAAAATACACAGAATaccttcaaaataaaaaaaaaagatgccgaagaaagaaattgcgaTGAAGGAGTGactgtaaaagaagaaatggttCCAGAAgtagcagaagaagaagaagagatcaATGTGGATGAGCAAATAGAAGAGAATGATCAAAAAGCAGATCAACAatcagaaattgaaacgaaattaaaaactgaGTTTGAGGAAGAAtttgtttctgaaaaaatGGAATCGTGA
Protein Sequence: MKTHDTQKPYQCTTCSRGYNTAAALTSHMQSHKKHHQSQTSKLQDIDYGRRSVSSHSTSSPPIPSSPSPSLNIVLNSKTGMKNTQGSASTTPILSSPLKLACMYCTRDTFSCMQQLQMHVHTMHQAILSGETVAVSPSTNRTNEQISYQHGKTFDRKPEGSSKEHKRKYQDDSEKSIEKDHYENAFTCSQCTMRFSTLNSLRDHLVSIHRTDGFCSALMMCPLCGIPCTSAATYAEHYVLQHCENRRTGLLEIRDYTDSKMNGNYDTKSQTRSQKCKEQTSSEPADLTNKHSTGTENNYTAGTLLCGQCGAALKDFESFREHLARHLQADHRNDVRHPCLKCEATFQDREDMLVHLTKHYLGQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVSNNENSSGNAPEEGKSFFRSESEMTNHVRNVHAPPTMSNNSPVARSPASTPGITGNSGPRCVFCGICCSSELELQLHLASHSANLYRCPVCREGFAVEFLLDRHITQAHHSNDHQDVMRSRENGRIGRLPRLQEEAKSQKRGRSPASSNNNSLNQRDNNNKRPNYTNASSQQCDLCERGEFSNEAELQAHKKLVHTPTKFQNKSVSSLSMTCAYCGEVCRSRTDLESHTRIQHASNEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDTCIVCRGNLSSESQFLEHMQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLKTSGSHSVASSPSPNQKNQSPSCCLCLRDYSADDFVNLPPSHISGGGQSLKVCKSCYVRHSQGLPILNSPYEPIKCDASWTSNNKDRQWDKSKDKWETENEEDKNERHDSKKCQDCGVKFEDSDKVEKHRIVEHEKVMSGVMLNTYTCIQCQVIKMSFPTEAKIQQHVKKEHLETSGRTSIETLRCHLCLFEASSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLSARPYDCSQCTLKFFFRAELDHHMLTFHRPRDMPSPSENTQNTFKIKKKDAEERNCDEGVTVKEEMVPEVAEEEEEINVDEQIEENDQKADQQSEIETKLKTEFEEEFVSEKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_01421111; iTF_00873985; iTF_01418561; iTF_00982480; iTF_01417908; iTF_00734113; iTF_00983153; iTF_00983764; iTF_01419198; iTF_01419840;
80% Identity: -