Basic Information

Insect: Tetragonula clypearis
Gene Symbol: znf423
Assembly: GCA_010645135.1
Location: WIUT01012346.1:1-3973[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.5 7.1e+02 1.8 2.0 14 23 1 10 1 10 0.93

2 20 2.2e-05 0.0035 18.5 0.4 1 23 16 38 16 38 0.99

3 20 0.00044 0.07 14.4 0.9 1 23 192 215 192 215 0.95

4 20 0.097 15 7.0 0.1 2 23 226 248 225 248 0.88

5 20 0.16 25 6.4 0.1 3 23 312 332 311 332 0.97

6 20 0.042 6.7 8.2 0.7 1 23 344 366 344 366 0.96

7 20 0.011 1.7 10.0 0.3 1 23 375 398 375 398 0.92

8 20 2.8 4.5e+02 2.4 0.2 1 23 403 426 403 426 0.91

9 20 4.1 6.5e+02 1.9 0.3 10 23 458 472 456 472 0.93

10 20 0.075 12 7.4 2.0 2 23 500 521 500 521 0.96

11 20 0.0074 1.2 10.5 0.2 1 23 526 549 526 550 0.94

12 20 0.93 1.5e+02 3.9 0.1 2 23 612 635 611 635 0.83

13 20 0.0004 0.063 14.5 1.1 2 23 651 673 650 673 0.96

14 20 0.031 5 8.6 1.0 1 23 682 705 682 705 0.93

15 20 2.2 3.6e+02 2.7 0.3 5 23 716 734 712 734 0.84

16 20 0.00091 0.15 13.4 0.3 2 23 889 911 888 911 0.95

17 20 0.13 20 6.7 0.4 1 23 923 946 923 946 0.95

18 20 0.95 1.5e+02 3.9 0.4 2 23 959 980 958 980 0.94

19 20 0.36 58 5.2 0.1 2 23 989 1011 988 1011 0.93

20 20 0.017 2.7 9.4 3.1 1 23 1018 1041 1018 1041 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.5	7.1e+02	1.8	2.0	14	23	1	10	1	10	0.93
2	20	2.2e-05	0.0035	18.5	0.4	1	23	16	38	16	38	0.99
3	20	0.00044	0.07	14.4	0.9	1	23	192	215	192	215	0.95
4	20	0.097	15	7.0	0.1	2	23	226	248	225	248	0.88
5	20	0.16	25	6.4	0.1	3	23	312	332	311	332	0.97
6	20	0.042	6.7	8.2	0.7	1	23	344	366	344	366	0.96
7	20	0.011	1.7	10.0	0.3	1	23	375	398	375	398	0.92
8	20	2.8	4.5e+02	2.4	0.2	1	23	403	426	403	426	0.91
9	20	4.1	6.5e+02	1.9	0.3	10	23	458	472	456	472	0.93
10	20	0.075	12	7.4	2.0	2	23	500	521	500	521	0.96
11	20	0.0074	1.2	10.5	0.2	1	23	526	549	526	550	0.94
12	20	0.93	1.5e+02	3.9	0.1	2	23	612	635	611	635	0.83
13	20	0.0004	0.063	14.5	1.1	2	23	651	673	650	673	0.96
14	20	0.031	5	8.6	1.0	1	23	682	705	682	705	0.93
15	20	2.2	3.6e+02	2.7	0.3	5	23	716	734	712	734	0.84
16	20	0.00091	0.15	13.4	0.3	2	23	889	911	888	911	0.95
17	20	0.13	20	6.7	0.4	1	23	923	946	923	946	0.95
18	20	0.95	1.5e+02	3.9	0.4	2	23	959	980	958	980	0.94
19	20	0.36	58	5.2	0.1	2	23	989	1011	988	1011	0.93
20	20	0.017	2.7	9.4	3.1	1	23	1018	1041	1018	1041	0.97

Sequence Information

Coding Sequence: GACCACTTGAAGATTCATATGAAGACCCATGACACTCAAAAGCCGTATCAGTGCACAACCTGTTCCAGAGGTTACAACACAGCAGCTGCGCTAACGTCCCACATGCAATCTCACAAGAAACATCATCAATCTCAAACATCCAAACTGCAGGACATCGACTACGGTAGAAGAAGTGTATCTTCTCACAGTACATCATCGCCGCCAATACCAAGCTCTCCATCGCCATCTCTAAATATAGTCTTAAATTCAAAAACTGGTATGAAAAATACTCAAGGAAGTGCTTCGACAACTCCGATTCTGAGCTCTCCACTGAAATTAGCTTGCATGTATTGTACCAGAGATACCTTCAGTTGTATGCAACAACTTCAGATGCACGTGCATACGATGCATCAAGCTATCTTAAGTGGAGAAACTGTTGCAGTATCTCCATCAACTAACAGAACCAATGAACAAATAAGTTATCAGCATGGAAAAACTTTTGACAGAAAACCAGAAGGATCATCTAAAGAACACAAAAGGAAATATCAAGATGATTCAGAAAAATCTATTGAGAAAGATCACTATGAAAACGCATTTACATGCAGTCAATGTACTATGAGATTCTCTACGTTAAACTCATTAAGAGATCATTTGGTTTCGATTCATAGAACCGATGGTTTTTGTTCTGCTTTGATGATGTGTCCTCTTTGTGGCATTCCTTGCACTTCCGCAGCGACTTATGCGGAACACTATGTTCTCCAACACTGTGAAAATCGAAGAACAGGTCTCCTAGAAATTAGAGACTATACAGATTCTAAGATGAATGGAAATTATGACACCAAGAGTCAGACCAGAAGTCAGAAATGTAAGGAGCAAACGTCTTCTGAGCCAGCTGATTTGACTAACAAGCATTCCACCGgtacagaaaataattatacagcCGGTACATTGTTATGTGGACAGTGTGGAGCTGCTTTAAAGGACTTTGAATCATTCAGGGAACACTTAGCTAGACATCTTCAAGCTGATCATAGAAATGATGTTTCAAGACACCCTTGTTTAAAGTGTGAAGCCACTTTTCAAGATAGGGAAGACATGTTGGTACATTTGACGAAACATTATTTGGGCCAGATTAGTAAAGAATATGCTTGTGGCGCGTGTAAAAAACTTTATCCTCATCCTGATCTTCTTCAGAGACATTTACTCGACAGTCATGCTCATCATCTCTATCGATGCGCCTTGTGCAGAGATACTTTTGATTCTAGAGTGGCAATACAGGTCCATTTTGCTGTGAAACACAGTCAAGAATGCAGAATCTATAGATGCAATGCTTGCACAGTGtctaataatgaaaattcgtcaGGAAATGCGccagaagaaggaaaaagtttcttccgaAGTGAGTCTGAAATGACAAACCATGTAAGAAATGTCCACGCACCTCCTACGATGTCAAATAATAGTCCTGTGGCTAGGAGTCCTGCTTCCACTCCAGGAATAACTGGAAATTCCGGGCCAAGATGCGTCTTCTGTGGAATCTGTTGTAGTTCCGAGCTGGAATTACAACTCCATTTGGCCAGCCATTCTGCTAACTTATATAGATGTCCTGTTTGTAGAGAAGGATTTgctgtggaatttttattagacaGACATATTACTCAAGCACATCATTCTAATGACCATCAGGATGTCATTAGAAGTAGAGAGAATGGAAGAATTGGTAGATTACCAAGATTACAGGAAGAGGCCAAGTCCCAAAAAAGAGGTCGCTCTCCAGCCTCCAGCAATAACAACTCTCTGAATCAACGTGACAACAACAATAAACGTCCAAATTACGCTAATGCATCTTCTCAACAATGCGATCTCTGCGAAAGAGGAGAGTTTTCCAACGAAGCAGAACTTCAAGCTCACAAAAAATTGGTTCACACTCCGACCAAGTTTCAAAATAAGTCTATATCAAGTCTTAGCATGACTTGCGCATACTGTGGAGAAATATGTCGTTCTAGAACTGACCTGGAATCTCATACAAGGATTCAACATGCATCGAGTGAACCTGGAGGACGCCACAAGTGTAATATTTGTGACGAAGTGTGTCCATCAGGAGCAACACTTGCAGAACATAAACTGCAGAAACATTGTAAGATTCAATTAAGTGACACGTGTATCGTTTGTCGAGGAAACCTATCTTCAGAATCACAGTTTCTAGAACATATGCAAAGACACAGTCTGGAGAATGTGGATCCTCAGCAAAGATTAGACGGTTCTCTTCCCCATCTTCCTGCAGCTTGTGTAGTTTGTAGACAGACATTGATCAGTGATTTGGAATGTCGTCTCCATGCCAGACACCACTTAAAAACTTCTGGCTCTCACAGCGTAGCATCCAGCCCCAGTCCCAACCAAAAGAATCAGAGTCCAAGTTGTTGTCTTTGTTTAAGAGATTATTCAGCTGATGACTTTGTTAATTTACCTCCAAGTCATATAAGTGGAGGAGGACAGTCTTTAAAGGTTTGCAAATCTTGTTACATTCGACACTCTCAGGGTCTACCTATTTTGAATTCACCTTACGAGCCTATTAAATGTGATGCTTCTTGGACATCCAATAATAAAGACAGACAATGGGATAAATCAAAGGATAAATGGGAAACCGAGAATGAAGAAGATAAAAACGAGAGGCATGATAGTAAGAAGTGTCAAGACTGTGGggtgaaatttgaagattctGACAAGGTGGAAAAACATAGGATAGTCGAGcatgaaaaagatataagtGGAGTTACGTTGAACACATACACATGTATACAGTGTCAGatgTCGTTCCCAACAGAGGCAAAGATTCAGCaacatgtaaaaaaagaacatcTAGAAACATCGGGAAGGACTTCCATAGAAACATTACGATGTCATCTGTGTCTTTTTGAAGCTAGCAGTCCATTACAATTGCAAAGTCATTTGATAGAACATACTTTCGCAGGATGTGCTGCTCTCAGTTGTTACATTTGCCAATCTCTCTTCACCGCACCTATTGGTCTTCAGAATCATATGCTTCAAGAACACGGCCTAAGTGCTCGTCCCTATGATTGTTCCCAATGTACGCTCAAATTCTTCTTCAGAGCAGAACTAGATCATCATATGTTAACATTTCATCGACCGAGAGACATGCCATCACCCAGTGAAAATACACAGAATAccttcaaaataaaaaaaaaagatgctgaaaaaagaaattgcaatgaAGGAGTGACTGTAAAAGAAGAAGTGGGTCCAGAAGtggcagaagaagaagaagagatcaATGTGGATGAGCAAATAGAAGAGAATGATCAAAAGGCAGATCAACAatcagaaattgaaacgaaattaaaaactgaGTTTGAGGAAGAATTTGTTCCTGAAAAAATGGAATCGTGA
Protein Sequence: DHLKIHMKTHDTQKPYQCTTCSRGYNTAAALTSHMQSHKKHHQSQTSKLQDIDYGRRSVSSHSTSSPPIPSSPSPSLNIVLNSKTGMKNTQGSASTTPILSSPLKLACMYCTRDTFSCMQQLQMHVHTMHQAILSGETVAVSPSTNRTNEQISYQHGKTFDRKPEGSSKEHKRKYQDDSEKSIEKDHYENAFTCSQCTMRFSTLNSLRDHLVSIHRTDGFCSALMMCPLCGIPCTSAATYAEHYVLQHCENRRTGLLEIRDYTDSKMNGNYDTKSQTRSQKCKEQTSSEPADLTNKHSTGTENNYTAGTLLCGQCGAALKDFESFREHLARHLQADHRNDVSRHPCLKCEATFQDREDMLVHLTKHYLGQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVSNNENSSGNAPEEGKSFFRSESEMTNHVRNVHAPPTMSNNSPVARSPASTPGITGNSGPRCVFCGICCSSELELQLHLASHSANLYRCPVCREGFAVEFLLDRHITQAHHSNDHQDVIRSRENGRIGRLPRLQEEAKSQKRGRSPASSNNNSLNQRDNNNKRPNYANASSQQCDLCERGEFSNEAELQAHKKLVHTPTKFQNKSISSLSMTCAYCGEICRSRTDLESHTRIQHASSEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDTCIVCRGNLSSESQFLEHMQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLKTSGSHSVASSPSPNQKNQSPSCCLCLRDYSADDFVNLPPSHISGGGQSLKVCKSCYIRHSQGLPILNSPYEPIKCDASWTSNNKDRQWDKSKDKWETENEEDKNERHDSKKCQDCGVKFEDSDKVEKHRIVEHEKDISGVTLNTYTCIQCQMSFPTEAKIQQHVKKEHLETSGRTSIETLRCHLCLFEASSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLSARPYDCSQCTLKFFFRAELDHHMLTFHRPRDMPSPSENTQNTFKIKKKDAEKRNCNEGVTVKEEVGPEVAEEEEEINVDEQIEENDQKADQQSEIETKLKTEFEEEFVPEKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_01420489;
80% Identity: -