Basic Information

Insect: Tetragonula carbonaria
Gene Symbol: znf423
Assembly: GCA_010645115.1
Location: WIUU01010996.1:3120-6993[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.5 6.2e+02 1.8 2.0 14 23 1 10 1 10 0.93

2 20 2.2e-05 0.003 18.5 0.4 1 23 16 38 16 38 0.99

3 20 0.00044 0.06 14.4 0.9 1 23 192 215 192 215 0.95

4 20 0.097 13 7.0 0.1 2 23 226 248 225 248 0.88

5 20 0.16 22 6.4 0.1 3 23 312 332 311 332 0.97

6 20 0.042 5.8 8.2 0.7 1 23 343 365 343 365 0.96

7 20 0.011 1.5 10.0 0.3 1 23 374 397 374 397 0.92

8 20 2.8 3.9e+02 2.4 0.2 1 23 402 425 402 425 0.91

9 20 4.1 5.7e+02 1.9 0.3 10 23 457 471 455 471 0.93

10 20 0.075 10 7.4 2.0 2 23 499 520 499 520 0.96

11 20 0.0074 1 10.5 0.2 1 23 525 548 525 549 0.94

12 20 0.93 1.3e+02 3.9 0.1 2 23 611 634 610 634 0.83

13 20 0.00014 0.019 16.0 1.1 2 23 650 672 649 672 0.96

14 20 0.031 4.4 8.6 1.0 1 23 681 704 681 704 0.93

15 20 2.2 3.1e+02 2.7 0.3 5 23 715 733 711 733 0.84

16 20 0.00091 0.13 13.4 0.3 2 23 888 910 887 910 0.95

17 20 0.13 17 6.7 0.4 1 23 922 945 922 945 0.95

18 20 0.95 1.3e+02 3.9 0.4 2 23 958 979 957 979 0.94

19 20 0.36 50 5.2 0.1 2 23 988 1010 987 1010 0.93

20 20 0.017 2.4 9.4 3.1 1 23 1017 1040 1017 1040 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.5	6.2e+02	1.8	2.0	14	23	1	10	1	10	0.93
2	20	2.2e-05	0.003	18.5	0.4	1	23	16	38	16	38	0.99
3	20	0.00044	0.06	14.4	0.9	1	23	192	215	192	215	0.95
4	20	0.097	13	7.0	0.1	2	23	226	248	225	248	0.88
5	20	0.16	22	6.4	0.1	3	23	312	332	311	332	0.97
6	20	0.042	5.8	8.2	0.7	1	23	343	365	343	365	0.96
7	20	0.011	1.5	10.0	0.3	1	23	374	397	374	397	0.92
8	20	2.8	3.9e+02	2.4	0.2	1	23	402	425	402	425	0.91
9	20	4.1	5.7e+02	1.9	0.3	10	23	457	471	455	471	0.93
10	20	0.075	10	7.4	2.0	2	23	499	520	499	520	0.96
11	20	0.0074	1	10.5	0.2	1	23	525	548	525	549	0.94
12	20	0.93	1.3e+02	3.9	0.1	2	23	611	634	610	634	0.83
13	20	0.00014	0.019	16.0	1.1	2	23	650	672	649	672	0.96
14	20	0.031	4.4	8.6	1.0	1	23	681	704	681	704	0.93
15	20	2.2	3.1e+02	2.7	0.3	5	23	715	733	711	733	0.84
16	20	0.00091	0.13	13.4	0.3	2	23	888	910	887	910	0.95
17	20	0.13	17	6.7	0.4	1	23	922	945	922	945	0.95
18	20	0.95	1.3e+02	3.9	0.4	2	23	958	979	957	979	0.94
19	20	0.36	50	5.2	0.1	2	23	988	1010	987	1010	0.93
20	20	0.017	2.4	9.4	3.1	1	23	1017	1040	1017	1040	0.97

Sequence Information

Coding Sequence: GACCACTTGAAGATTCATATGAAGACGCATGACACTCAAAAGCCGTATCAGTGCACAACCTGTTCCAGAGGTTACAACACAGCAGCTGCGCTAACGTCCCACATGCAATCTCACAAGAAACATCATCAATCTCAAACATCCAAACTCCAGGACATCGACTACGGTAGAAGAAGTGTATCTTCTCACAGTACATCATCGCCGCCAATACCAAGCTCTCCATCGCCATCTCTAAATATAGTCTTAAATTCAAAAACTGGTATGAAAAATACTCAAGGAAGTGCTTCGACAACTCCGATTCTGAGCTCTCCACTGAAATTAGCTTGCATGTATTGTACCAGAGATACCTTCAGTTGCATGCAACAACTTCAGATGCACGTGCATACGATGCATCAAGCTATCTTAAGTGGAGAAACTGTTGCAGTATCTCCATCAATTAACAGAACCAATGAACAAATAAGTTATCAGCATGGAAAAACTTTTGACAGAAAGCCAGAAGGATCGTCTAAAGAACACAAAAGGAAATATCAAGATGATTCAGAAAAATCTATTGAGAAAGATCACTATGAAAACGCATTTACATGCAGTCAATGTACTATGAGATTCTCTACGTTAAACTCATTGAGAGATCATTTGGTTTCGATTCATAGAACCGATGGTTTTTGTTCTGCTTTGATGATGTGTCCTCTTTGTGGCATTCCTTGCACTTCTGCAGCGACTTATGCAGAACACTATGTTCTCCAACACTGTGAAAATCGAAGAACAGGTCTCCTAGAAATTAGAGACTATACAGATTCTAAGATGAATGGAAATTATGACACCAAGAGTCAGACCAGAAGTCAGAAATGTAAGGAGCAAACGTCTTCTGAGCCAGCTGATTTGACTAACAAGCATTCCACCGgtacagaaaataattatacagcTGGTACATTGTTATGTGGACAGTGTGGAGCTGCTTTAAAGGACTTTGAATCATTCAGGGAACACTTAGCTAGACATCTTCAAGCTGATCATAGAAATGATGTTAGACACCCTTGTTTAAAGTGTGAAGCCACTTTTCAAGATAGGGAAGACATGTTGGTACATTTGACGAAACATTATTTGGGCCAGATTAGTAAAGAATATGCTTGTGGCGCATGTAAAAAACTTTATCCTCATCCTGATCTTCTTCAGAGACATTTACTCGACAGTCATGCTCATCATCTCTATCGATGCGCCTTGTGCAGAGATACTTTTGATTCTAGAGTGGCAATACAGGTCCATTTTGCTGTGAAACACAGTCAAGAATGCAGAATCTATAGATGCAATGCTTGCACAGTGtctaataatgaaaattcgtcAGGAAATGCGccagaagaaggaaaaagtttcttccgAAGTGAGTCTGAAATGACAAACCATGTAAGAAATGTCCACGCACCTCCTACGATGTCAAATAATAGTCCTGTGGCTAGGAGTCCTGCCTCCACTCCAGGAATAACTGGAAATTCCGGACCAAGATGCGTCTTCTGTGGAATCTGTTGTAGTTCCGAGCTGGAATTACAACTCCATTTGGCCAGCCATTCTGCTAACTTGTATAGATGTCCTGTTTGTAGAGAAGGATTTgccgtggaatttttattagacAGACATATTACTCAAGCACATCATTCTAATGACCATCAGGATGTCATGAGGAGTAGAGAGAATGGAAGAATTGGTAGATTACCAAGATTACAGGAAGAGGCCAAGTCCCAGAAAAGAGGTCGCTCTCCAGCCTCCAGCAATAACAACTCTCTGAATCAACGTGACAACAACAATAAACGTCCAAATTACACTAATGCATCTTCTCAACAATGCGATCTCTGCGAAAGAGGAGAGTTTTCCAACGAAGCAGAACTTCAAGCTCACAAAAAATTGGTTCACACTCCGACCAAGTTTCAAAATAAGTCTGTATCAAGTCTTAGCATGACTTGCGCATACTGTGGAGAAGTATGTCGTTCTAGAACTGATCTGGAATCTCATACAAGGATTCAACATGCATCGAGTGAACCTGGAGGACGCCACAAGTGTAATATTTGTGACGAAGTGTGTCCATCAGGAGCAACACTTGCAGAACATAAACTGCAGAAACATTGTAAGATTCAATTAAGTGACACGTGTATCGTTTGTCGAGGAAACCTATCTTCAGAATCACAGTTTCTAGAACATATGCAAAGACACAGTCTGGAGAATGTGGATCCTCAGCAAAGATTAGACGGTTCTCTTCCCCATCTTCCTGCAGCTTGTGTAGTTTGTAGACAGACATTGATCAGTGATTTGGAATGTCGTCTCCATGCCAGACACCACTTAAAAACTTCTGGCTCTCACAGCGTAGCATCCAGCCCCAGTCCGAATCAAAAGAATCAGAGTCCAAGTTGTTGTCTTTGTTTAAGAGATTATTCAGCTGATGACTTTGTTAATTTACCTCCAAGTCATATAAGTGGAGGAGGACAGTCTTTAAAGGTTTGCAAATCTTGTTACATTCGACACTCTCAGGGTCTACCTATTTTGAATTCACCTTACGAACCTATTAAATGTGATGCTTCTTGGACATCCAATAATAAAGATAGACAATGGGATAAATCAAAGGATAAATGGGAAACCGAGAatgaagaagataaaaatgaGAGGCATGATAGTAAGAAGTGTCAAGATTGTGGggtgaaatttgaagattctGACAAGGTGGAAAAACATAGGATAGTCGAGCATGAAAAAGTTATGAGTGGAGTTATGTCGAACACATACACATGTATACAGTGTCAGaTGTCGTTCCCAACAGAGGCAAAGATTCAGCaacatgtaaaaaaagaacatcTAGAAACATCGGGAAGGACTTCCATAGAAACATTACGATGTCATCTGTGTCTTTTTGAAGCTAGCAGTCCATTGCAATTGCAAAGTCATTTGATAGAACATACTTTCGCAGGATGTGCTGCTCTCAGTTGTTACATTTGCCAATCTCTCTTCACCGCACCTATTGGTCTTCAGAATCATATGCTTCAAGAACACGGCCTAAGTGCTCGCCCCTATGATTGTTCCCAATGTACACTTAAATTCTTCTTCAGAGCAGAACTAGATCATCATATGTTAACATTTCATCGACCGAGAGACATGCCATCACCCAGTGAAAATACACAGAATAccttcaaaataaaaaaaaaagatgccgaagaaagaaattgcgaTGAAGGAGTGactgtaaaagaagaaatggtTCCAGAAgtagcagaagaagaagaagagatcaATGTGGATGAGCAAATAGAAGAGAATGATCAAAAGGCAGATCAACAatcagaaattgaaacgaaattaaaaactgaGTTTGAGGAAGAAtttgtttctgaaaaaatGGAATCGTGA
Protein Sequence: DHLKIHMKTHDTQKPYQCTTCSRGYNTAAALTSHMQSHKKHHQSQTSKLQDIDYGRRSVSSHSTSSPPIPSSPSPSLNIVLNSKTGMKNTQGSASTTPILSSPLKLACMYCTRDTFSCMQQLQMHVHTMHQAILSGETVAVSPSINRTNEQISYQHGKTFDRKPEGSSKEHKRKYQDDSEKSIEKDHYENAFTCSQCTMRFSTLNSLRDHLVSIHRTDGFCSALMMCPLCGIPCTSAATYAEHYVLQHCENRRTGLLEIRDYTDSKMNGNYDTKSQTRSQKCKEQTSSEPADLTNKHSTGTENNYTAGTLLCGQCGAALKDFESFREHLARHLQADHRNDVRHPCLKCEATFQDREDMLVHLTKHYLGQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVSNNENSSGNAPEEGKSFFRSESEMTNHVRNVHAPPTMSNNSPVARSPASTPGITGNSGPRCVFCGICCSSELELQLHLASHSANLYRCPVCREGFAVEFLLDRHITQAHHSNDHQDVMRSRENGRIGRLPRLQEEAKSQKRGRSPASSNNNSLNQRDNNNKRPNYTNASSQQCDLCERGEFSNEAELQAHKKLVHTPTKFQNKSVSSLSMTCAYCGEVCRSRTDLESHTRIQHASSEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDTCIVCRGNLSSESQFLEHMQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLKTSGSHSVASSPSPNQKNQSPSCCLCLRDYSADDFVNLPPSHISGGGQSLKVCKSCYIRHSQGLPILNSPYEPIKCDASWTSNNKDRQWDKSKDKWETENEEDKNERHDSKKCQDCGVKFEDSDKVEKHRIVEHEKVMSGVMSNTYTCIQCQMSFPTEAKIQQHVKKEHLETSGRTSIETLRCHLCLFEASSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLSARPYDCSQCTLKFFFRAELDHHMLTFHRPRDMPSPSENTQNTFKIKKKDAEERNCDEGVTVKEEMVPEVAEEEEEINVDEQIEENDQKADQQSEIETKLKTEFEEEFVSEKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_01420489;
80% Identity: -