Basic Information

Insect: Melipona quadrifasciata
Gene Symbol: znf423
Assembly: GCA_001276565.1
Location: KQ435791.1:112584-145944[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6.6e-06 0.00057 19.9 1.5 1 23 159 181 159 181 0.98

2 20 0.38 32 4.9 3.9 1 23 187 209 187 209 0.97

3 20 8.2e-07 7e-05 22.7 4.3 1 23 215 237 215 237 0.99

4 20 2.3e-05 0.002 18.2 0.4 1 23 243 265 243 265 0.99

5 20 0.00032 0.028 14.6 0.6 1 23 388 411 388 411 0.95

6 20 0.1 8.6 6.7 0.1 2 23 422 444 421 444 0.88

7 20 0.51 43 4.5 0.1 3 23 484 504 483 504 0.95

8 20 0.044 3.7 7.9 0.7 1 23 515 537 515 537 0.96

9 20 0.011 0.96 9.7 0.3 1 23 546 569 546 569 0.92

10 20 3 2.5e+02 2.1 0.2 1 23 574 597 574 597 0.91

11 20 0.079 6.7 7.0 2.0 2 23 671 692 671 692 0.96

12 20 0.0078 0.67 10.2 0.2 1 23 697 720 697 721 0.94

13 20 0.63 54 4.2 0.2 2 23 785 808 784 808 0.85

14 20 0.00014 0.012 15.7 1.1 2 23 824 846 823 846 0.96

15 20 0.033 2.8 8.2 1.0 1 23 855 878 855 878 0.93

16 20 0.00095 0.081 13.1 0.3 2 23 1062 1084 1061 1084 0.95

17 20 0.2 17 5.7 0.4 1 23 1096 1119 1096 1119 0.96

18 20 1 86 3.6 0.3 2 23 1132 1153 1131 1153 0.94

19 20 0.14 12 6.3 0.1 2 23 1162 1184 1161 1184 0.94

20 20 0.0036 0.3 11.3 1.6 1 23 1191 1214 1191 1214 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6.6e-06	0.00057	19.9	1.5	1	23	159	181	159	181	0.98
2	20	0.38	32	4.9	3.9	1	23	187	209	187	209	0.97
3	20	8.2e-07	7e-05	22.7	4.3	1	23	215	237	215	237	0.99
4	20	2.3e-05	0.002	18.2	0.4	1	23	243	265	243	265	0.99
5	20	0.00032	0.028	14.6	0.6	1	23	388	411	388	411	0.95
6	20	0.1	8.6	6.7	0.1	2	23	422	444	421	444	0.88
7	20	0.51	43	4.5	0.1	3	23	484	504	483	504	0.95
8	20	0.044	3.7	7.9	0.7	1	23	515	537	515	537	0.96
9	20	0.011	0.96	9.7	0.3	1	23	546	569	546	569	0.92
10	20	3	2.5e+02	2.1	0.2	1	23	574	597	574	597	0.91
11	20	0.079	6.7	7.0	2.0	2	23	671	692	671	692	0.96
12	20	0.0078	0.67	10.2	0.2	1	23	697	720	697	721	0.94
13	20	0.63	54	4.2	0.2	2	23	785	808	784	808	0.85
14	20	0.00014	0.012	15.7	1.1	2	23	824	846	823	846	0.96
15	20	0.033	2.8	8.2	1.0	1	23	855	878	855	878	0.93
16	20	0.00095	0.081	13.1	0.3	2	23	1062	1084	1061	1084	0.95
17	20	0.2	17	5.7	0.4	1	23	1096	1119	1096	1119	0.96
18	20	1	86	3.6	0.3	2	23	1132	1153	1131	1153	0.94
19	20	0.14	12	6.3	0.1	2	23	1162	1184	1161	1184	0.94
20	20	0.0036	0.3	11.3	1.6	1	23	1191	1214	1191	1214	0.97

Sequence Information

Coding Sequence: ATGCTGGATGCCAATTGGGCGAGTGCCTTAATTCCGTCGCGCATTCATGTTGCACAATTGCAGGAACACCTGATTTTTCACGAGATCTGCGTTTGTAATCCATCGGATTCACTTGTGGGTGGAGGATGCGACCCATTTAAACGGATGTACGTCCGTGATCTCGTTGGGTGTCTTCTCGTGTTCGTGTTTCAAGCGAGCAAGAGACGACGAAATTCCGTAAAATCTCTTAAATTCAGTGagttaaaacaacaaaattcaaaaaatcccaacaatttgttatttgatcTTAATGTTCaagAAGCTTTGGGGACCGGAAGTTCATCGTGGCAGAGCGAAGATGGTGGTCCAAACTCACGACGCGGTGGTGAGACGCCCTCTTCTTGCGCAACGCCGACGTCAGCCAGCTTCCCGTCGGAGCCTGAGGTGGATGCTGACGTCGGCGTTAATGCCGACGGAACCAACGCTATCGCACCTTATCCTTGTCAATTCTGCGACAGAACGTTTCCGCGACTTAGCTACCTGAAAAAACACGAACAGAGTCACGGAGATCAAATGCCATATAGATGCAGTTGGTGTGCCAGATTATTCAAACATAAACGCAGTAGAGATCGACACGTGAAGCTTCATACAGGAGACCGAAGATATCGATGCACGCACTGCGAAGCTGCTTTCTCCAGAAGCGACCACTTGAAGATTCATATGAAGACCCATGACACTCAAAAGCCGTATCAGTGCACAACTTGTTCCAGAGGCTACAACACAGCAGCTGCCCTAACATCCCACATGCAATCTCACAAGAAACATCATCAATCTCAAACATCCAAACTTCAGGACATCGACTACGGTAGAAGAAGTGTATCCTCTCACAGTACATCATCGCCACCAATACCAAGCTCTCCATCGCCATCTTTAAACATAGTCTTGAATTCAAAAACTTGCATGAAAAGTACTCAAGGAAGTGCTTCGACAACTCCAATTCTGAGCTCTCCACTGAAGTTAGCTTGCATGTATTGTACTAGAGATACCTTCAGTTGTATGCAACAACTCCAGATGCACGTGCATACGATGCACCAAACTATCCTAAATGGAGAAACTGTTGCAGTATCTCCATCAACTAATAGAATCAATGAACAAATAAAGAAAGATCACTATGAAAACGCATTTACATGCAGTCAATGTACTATGAAATTCTCTACGTTAGGCTCATTAAGGGATCATTTGGTTTCAATTCATAGAACCGATGGTTTTGGCTCTGCTTTGATGATGTGTCCTCTTTGTGGCATTCCTTGTACTTCTGCAGCGACTTATGCAGAACACTATGTTCTTCAACATTGTGAAAATCGAAGAACAGATCTCCTAGAAATTAGAGACTATACAGATTCTAAGATGAATGGAAATTATGACACTAAAAGTATCAGGAAAAGTAATTATACAGCTGGTACATTGTTATGTGGACAGTGTGGAGCTGCTTTAAAGGACTTCGAATCATTCAGGGAACACTTAGCTGGACATCTTCAAGCTGATCATAGAAATGATGTTAGACATCCTTGTTTAAAGTGTGAAGCCACTTTTCAAGATAGGGAAGACATGTTGGTACATTTAACGAAACATTATTTGAGCCAGATTAGTAAAGAATATGCTTGTGGTGCATGTAAGAAGCTTTATCCTCATCCTGATCTTCTTCAGAGGCATTTACTCGACAGTCATGCTCATCATCTCTATCGATGCGCCTTGTGCAGAGATACATTTGATTCTAGAGTGGCAATACAGGTTCATTTTGCTGTGAAACACAGTCAAGAATGCAGAATCTATAGATGCAATGCTTGCACAGTGtctaataatgaaaattcaccgGGAAATGCGccagaagaaggaaaaagctTCTTCCGAAGTGAGTCTGAAATGGCAAACCATGTAAAAAATGTCCACGCACCTCCAACTATGTCAAATAATAGCCCTGTGGCTAGGAGTCCTGCTTCCACTCCAGGAACAACTGGGAATTCCGGACCAAGATGCGTCTTTTGTGGAATCTGTTGTAGTTCCGAGTTGGAACTACAACTCCATTTGGCCAGCCATTCTGCTAACTTATATAGATGTCCTGTTTGTAGAGAAGGATTTgccgtggaatttttattagatagACATATTACTCAAGCACATCATTCTAGTGACCATCAGAATGTCGTGAGAAGTAATTCTAGAGAGAATGGAAGAATTGGTAGACTACCAAGATTACAGGAAGagGCTAAATCCCAAAAAAGAGGTCGCTCTCCAGCCTCCAGCAACAACAACTCTTTGAATCAACGTGACAACAACAATAAACGTCCAAATTACACCAATACATCCTCTCAACAATGCGATCTCTgcgaaagaggaaaattttccaacgaagcAGAACTTCAAGCTCACAAAAAATTAGTTCACACTCCGatcaagtttcaaaataaGTCTATATCAAGTCTTAGCATGACTTGTGCATACTGTGGAGAAGTATGCCGTTCTAGAACTGACTTAGAATCTCATACAAGAATCCAACATGCATCAAGTGAACCTGGAGGACGCCACAAGTGTAATATTTGTGATGAAGTGTGCCCATCAGGAGCAACACTTGCAGAACACAAACTTCAGAAACATTGTAAGATTCAATTATGTGACACATGTATCGTTTGTCGAGGAAACCTATTTTCAGAATCACAGTTTCTAGAACATGTGCAAAGACACAGTCTGGAGAATGTGGATCCTCAGCAGAGATTAGATGGTTCTCTTCCTCATCTTCCTGCAGCTTGTGTAGTTTGTAGACAGACATTGATCAGTGATTTGGAATGTCGTCTCCATGCCAGACATCACTTAAGAACTTCTGGCTCTCATAGTGTGGCATCCAGTCCCAGTCCCAACCAAAAGAATCAGAGTCCAAGTTGTTGTCtttgtttaagaaattattcagCTGATGACTTTGTTAATTTACCTCCAAGTCATATAAGTGGAGGAGGGCAGTCTTTAAGGGTTTGCAAATCTTGTTACATTCGACACTCTCAGGGTCTACCTATTTTGAATTCACCTTACGAGCCTATTAAATGTGATGATTCTTGGACATCCAGTAATAAAAATGGACAATGGGATAAATCAAAGGATAAGTGGGAAACCGAGaataaagaagataaaaacgAGGGGAATGATAGTAAGAAGTGTCAAGATTGTGGGGTGAAATTTGAGGATTCTGACAAGGTGGAGAAACATAGGATAGTCGAGCATGAAAAAGTTATAAGTGGAGTTATGTTGAACACATACAGATGTATACAGTGTCAGatgTCGTTCCCAACAGAGGCAAGGATTCAACAACATGTAAGAAAAGAACACCTAGAAACATCGGGAAGTACTTCCATAGAAACATTACGATGTCACTTGTGTCTTTTTGAAGCTAGCAATCCGTTAGAATTGCAAAGCCATTTGATAGAGCATACTTTCGCAGGATGTGCCGCTCTCAGCTGTTACATTTGCCAATCTCTCTTCACCGCACCTACTGGTCTTCAGAATCATATGCTTCAAGAACACGGTCTGGGTGCTCGTCCCTATGATTGTTCCGAATGTACACTCAAATTCTTCTTCAGAGCAGAACTAGATCATCATATGTTAACAATTCACCGATCAAGAGACGTGCCATCACCCAGTACAAATACACAGAATAccatcgaaataaaaaaaaaagatgccgaagaaagaaattgcgaTGAAGAAGTGActgtgaaagaagaaatggtTCTAGGAgcagcagaagaagaagaagagatcAACGTGGACGAACAAATAGAACAGGATGGTCAAAATGCAGATCAACAATCAGAAATCgagacgaaattaaaaactgaGCTCGAGGAAGAATTTATTCCCGAAAAAATGGAATCCGTTTTATTAACTTTGGTCGGTATTATAAGTggcaattattatttgaagaaaGCAGATGCAATAACTTGTCCACTAGGCTTAATTGTTCCAAATGCAGTGTTTGGCGTTAAAGTGTCTCCTGATAAGAAAGTGTCCCACACTGTGAAGGGAAATTTGGGTGATCCCCTTTGCAATTTATGCATGTTGGTGGAGTTTCAAGAGTTTTTTTTGCAAACTGCCTTTTTGTTACAGTTAATGGAGGTATGA
Protein Sequence: MLDANWASALIPSRIHVAQLQEHLIFHEICVCNPSDSLVGGGCDPFKRMYVRDLVGCLLVFVFQASKRRRNSVKSLKFSELKQQNSKNPNNLLFDLNVQEALGTGSSSWQSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVGVNADGTNAIAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDTQKPYQCTTCSRGYNTAAALTSHMQSHKKHHQSQTSKLQDIDYGRRSVSSHSTSSPPIPSSPSPSLNIVLNSKTCMKSTQGSASTTPILSSPLKLACMYCTRDTFSCMQQLQMHVHTMHQTILNGETVAVSPSTNRINEQIKKDHYENAFTCSQCTMKFSTLGSLRDHLVSIHRTDGFGSALMMCPLCGIPCTSAATYAEHYVLQHCENRRTDLLEIRDYTDSKMNGNYDTKSIRKSNYTAGTLLCGQCGAALKDFESFREHLAGHLQADHRNDVRHPCLKCEATFQDREDMLVHLTKHYLSQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVSNNENSPGNAPEEGKSFFRSESEMANHVKNVHAPPTMSNNSPVARSPASTPGTTGNSGPRCVFCGICCSSELELQLHLASHSANLYRCPVCREGFAVEFLLDRHITQAHHSSDHQNVVRSNSRENGRIGRLPRLQEEAKSQKRGRSPASSNNNSLNQRDNNNKRPNYTNTSSQQCDLCERGKFSNEAELQAHKKLVHTPIKFQNKSISSLSMTCAYCGEVCRSRTDLESHTRIQHASSEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLCDTCIVCRGNLFSESQFLEHVQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLRTSGSHSVASSPSPNQKNQSPSCCLCLRNYSADDFVNLPPSHISGGGQSLRVCKSCYIRHSQGLPILNSPYEPIKCDDSWTSSNKNGQWDKSKDKWETENKEDKNEGNDSKKCQDCGVKFEDSDKVEKHRIVEHEKVISGVMLNTYRCIQCQMSFPTEARIQQHVRKEHLETSGSTSIETLRCHLCLFEASNPLELQSHLIEHTFAGCAALSCYICQSLFTAPTGLQNHMLQEHGLGARPYDCSECTLKFFFRAELDHHMLTIHRSRDVPSPSTNTQNTIEIKKKDAEERNCDEEVTVKEEMVLGAAEEEEEINVDEQIEQDGQNADQQSEIETKLKTELEEEFIPEKMESVLLTLVGIISGNYYLKKADAITCPLGLIVPNAVFGVKVSPDKKVSHTVKGNLGDPLCNLCMLVEFQEFFLQTAFLLQLMEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_01420489;
80% Identity: -