Tmol001902.1
Basic Information
- Insect
- Tenebrio molitor
- Gene Symbol
- bab1
- Assembly
- GCA_963966145.1
- Location
- OZ014538.1:9258053-9274193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.6e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 3.9 2e+03 -0.8 0.8 6 15 157 166 155 172 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACGAATCAAAGTCTTGTACACAACCTGCGCTTCCGCGAAAGAGGACCGTTGAAGTCCTGGCGACCTGAAACCATGGCCGAAGCAATATTTTCGGTGTTGAAGGAAGGCTTGTCCTTGTCCCAGGCCGCCAGGAAGTACGATATTCCCTATCCTACGTTTGTTCTTTACGCAAATCGAGTGCACAACATGTTAGGACCTTCCGCAGATGGTGGATCAGATCTACGACCGAAAGGCAGAGGTCGACCCCAACGGATTCTGCTAGGAGTTTGGCCAGATGAGCACATACGAGGTGTTATCAGAGCTGTAGTATTTAGAGACTCGCATCAAATCAAAGAAGAACCCCACATTGGATACCCACGAATACATGACGGCGTCAGCATACACAGCTACCAGAACAATTCGTGCAGCAACGGATCCGACCCGAACGTGTCTCCGGGCGCCGCGGCGGCAGCAGCCGTAGCCGCCGTGGCCCAAGGCCTACGACAGCAAATGTGCAGCATGGTGGCGGCGGCCCAACACCAGAGCTCCGCGCACGACACCAACCCCGTCGCGAGTCTGGTAAACTCGCTGGCCCTGGCCGGCCACTGCGGCAACGTGTCCATGTCCAGCAACGGCGCCGCCCCCATCAGCATGAGCCACGTGAGCTCGATGCGCAGCATGAGCAGTCCGGCTGGCAGCATACAGGACCTGCGGATAAGTCCCGCAGAGTCCGCTCTCGAGAGCCCCATCTCGTCCCCGCTGGGCCTGACGGTCTCCAGCTCGATGGAGCCCACCATCAACATGAACATAGGCAACAACATGGACATCGGCGTTTCGGGGATGACCTACAAGCCCACCAGGTCCTTCACGTCGCCCAGACCCGAGAATCTCTTCCAGGAAGACATCGACGAGTTGGTCAAACCGATGCACACTTCCACCCCACGCCCCAAGGACTCGATGGCCACCATTAAAATGGAACCACTGGCAGAGTGTCGTGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHIGYPRIHDGVSIHSYQNNSCSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSAHDTNPVASLVNSLALAGHCGNVSMSSNGAAPISMSHVSSMRSMSSPAGSIQDLRISPAESALESPISSPLGLTVSSSMEPTINMNIGNNMDIGVSGMTYKPTRSFTSPRPENLFQEDIDELVKPMHTSTPRPKDSMATIKMEPLAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00870482; iTF_00639457; iTF_00813635; iTF_00841763; iTF_01277607; iTF_00414984; iTF_00752871; iTF_00987050; iTF_00929493; iTF_01329707; iTF_01311478; iTF_01283296; iTF_01366251; iTF_01022130; iTF_00423674; iTF_01441850;
- 80% Identity
- -