Cang003192.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- bab1
- Assembly
- GCA_030157275.1
- Location
- CM058059.1:8172243-8187654[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-18 1.5e-14 53.7 0.0 1 43 64 107 64 109 0.95 2 2 1.4 2.4e+03 -1.3 1.1 6 15 193 202 191 207 0.87
Sequence Information
- Coding Sequence
- ATGTACACAAATATCCACTTGGCCAAGTTACTGGAGTCTTCCCATGCTTGGCTCGGTGCCTCCACGTCTTCTATAGCCGcAGACAGCTATCAGTATCAGTTGCAATCCATGTGGCAAAAATGTTGGAATACGAATCAAAGTCTTGTTCACAATCTGCGCTTCCGTGAAAGAGGGCCTCTGAAATCTTGGCGGCCCGAAACTATGGCCGAAGCAATATTCTCGGTACTCAAAGAAGGATTGTCGTTGTCACAAGCCGCCAGGAAATACGATATTCCTTATCCTACGTTCGTTCTTTACGCCAATCGTGTGCACAATATGCTGGGACCTTCGGCCGACGGAGGATCAGatttacGACCAAAGGGCAGAGGTCGACCCCAAAGGATTCTCTTAGGAGTTTGGCCAGATGAGCACATACGAGGTGTTATCCGAGCTGTAGTGTTCAGAGATTCGCATCAAATCAAAGAAGAACCCCATATTGGATATCCACGAATAcatGATGGCGTCAGTATACACAGCTACCCCAACAATTCTTGTAGTAACGGTTCCGACCCGAACGTGTCTCCTGGTGCGGCGGCAGCAGCCGCCGTCGCTGCCGTCGCCCAAGGTCTACGTCAACAAATGTGCAGCATGGTGGCGGCGGCGCAACACCAAAGCTCCGCACATGACACAAATCCGGTGGCGAGTCTGGTTAACTCCCTCGCATTAGCCGGTCATTGCGGCAACGTGTCCATGTCCAGCAACGGCGCCGCCGCACCCATCAGCATGACCCACGTGAGTTCGATGCGCAGCATGAGTAGTCCCGCCGGCAGCATACAAGACTTACGGATAAGTCCAGCGGAGTCGGCGTTGGAAAGTCCAATTTCATCGCCGTTGGGGCTCACCGTATCCAGTTCGATGGAGCCGGCGATTAATATGAACATCGGGAATAATATGGATGTCGGCATCTCGGGAATGACGTACAAGCAGACGAGGACGTTTGCGTCACCTAGACCGGAAAATCTCTTCCAAGAGGACATTGACGAATTGGTTAAACCGATGCATGCTTCCACTCCACGTCCTAAAGACTCTATGGCTACGATTAAGATGGAGCCGATGGCAGAGTGTCGTGGCGAATGA
- Protein Sequence
- MYTNIHLAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHIGYPRIHDGVSIHSYPNNSCSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSAHDTNPVASLVNSLALAGHCGNVSMSSNGAAAPISMTHVSSMRSMSSPAGSIQDLRISPAESALESPISSPLGLTVSSSMEPAINMNIGNNMDVGISGMTYKQTRTFASPRPENLFQEDIDELVKPMHASTPRPKDSMATIKMEPMAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_01409877;
- 80% Identity
- -