Eagr006251.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- bab1
- Assembly
- GCA_964023215.1
- Location
- OZ026855.1:24068499-24077045[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-16 8.5e-13 48.1 0.0 5 43 1 40 1 42 0.95 2 2 0.93 2.1e+03 -1.2 1.4 6 15 126 135 124 147 0.88
Sequence Information
- Coding Sequence
- ATGGCCGAAGCAATATTTTCTGTGCTAAAAGAAggtttgtcgttgtcgcaggcCGCCAGAAAATACGATATTCCCTATCCCACGTTCGTTCTTTATGCAAATCGAGTGCACAATATGTTAGGGCCTTCCGCAGACGGTGGATCAGACCTCCGGCCGAAAGGTAGGGGTCGACCTCAAAGGATTCTTCTAGGAGTCTGGCCAGATGAACATATAAGAGGTGTTATCAGAGCTGTTGTGTTTAGAGATTCCCATCAAATCAAAGAAGAACCTCATCTTGGATATCCAAGAATACATgaCGGCGTCAGCATACACAGCTACCCGAACAATTCGTGCAGCAACGGCTCCGAATCTAACGTGTCTCCTGGAGCCGCCGCGGCCGCCGCCGTCGCCGCCGTTGCCCAAGGCCTCCGCCAGCAAATGTGCAGCATGGTGGCGGCAGCGCAGCACCAGAGCTCCGCCCACGACACGAACCCCGTCGCCAGCCTGGTCAACTCCTTGGCGTTGGCTGGTCATTGCGGGAACGTGTCGAGCAACGGAGGCGCCCCGGCCGCTTTGGGAAGCCACGTGAGCTCGATGCGGAGTATGAGCAGTCCGGCCGGGAGCATCCAGGACTTGAGAATAAGCCCCTCCGAATCGGCGCTCGAGAGCCCCATCGCGTCGCCGCTCGGCCTGACCGTGTCCGGGTCCATGGAGCCTGCCATCAACATGAACATCGGCAGCGCCATGGACGTGGGGATCTCCGGCATGGCCTACAAACCCCCGCGGCCGTTCGCTTCGCCCCGACCCGAAAACCTCTTCCAGGAGGACATCGACGAACTCGTCAAGCCCATGCACGCCTCCACTCCGCGCCCCAAAGACTCCATGGCCACCATCAAAATGGAGCCCATGGCGGAGTGCCGCGGCGAATGA
- Protein Sequence
- MAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHLGYPRIHDGVSIHSYPNNSCSNGSESNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSAHDTNPVASLVNSLALAGHCGNVSSNGGAPAALGSHVSSMRSMSSPAGSIQDLRISPSESALESPIASPLGLTVSGSMEPAINMNIGSAMDVGISGMAYKPPRPFASPRPENLFQEDIDELVKPMHASTPRPKDSMATIKMEPMAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01409877;
- 80% Identity
- -