Sexi012034.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Spodoptera exigua
Gene Symbol
lolal
Assembly
GCA_011316535.1
Location
CM022047.1:2082501-2089000[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-16 3.8e-13 49.3 0.0 1 42 323 365 323 368 0.94

Sequence Information

Coding Sequence
ATGTCGCAGCAGTATAGTCTACGGTGGAATAACCACCAGCCGAACTTTATATCTATGTTCACGACCTTATTGAATACTCAAACTCTCGTGGACGTCACTTTGTCGGCTGATGGGAAGCAACTGCTCGCACATAAAGTTGTTTTATCTGCTTGCAGTACCTATTTCCAATCGCTCTTCGTTGATAATCCGTCGCCACATCCAATTGTCATTCTGAAGGATGTGACGTATGCCGACCTGCGCACCATGGTCGATTTTATGTACTGTGGGGAGGTGAACGTGACTGAAGAACAGTTACCCAAGgtCCTGGACACAGCcaagcttttaaaaataaagggtTTGACGGAAATGCCAGATTCTACGTCACTGACCCGATCCCAGGGCACTTCGGCTGAGTTCCAGAACCAGGGAGACTCCATGGACTCACAGAGGCAATCTCCAGCTGCTTCTCCTTCCAACAAGCGCAGACGGCGAAGGAAAAGTTCGAGTGGTTCTACTTCATTAAATGTGGTGGAAAACGAACAAGGCCGCGCTGACGTTGCCGCTCAGACGGTAGATGCGATCACGTTAAGCAGCGTGCCACAACAACGGCGCATGCGCGAATACCACGAAATCAGAACCATCGACAACTCGCAACAGGTAGACGACACCACGGAACAAGACCTCAACGTTGAGCAGATCGGACTAGAGAACACTCCCACAGCGATACCACAAGGAGGCCAATGGACTATGATGGAGCATTCGTATCCGCGGTACACAAACGCGTGCTTAGGAGCGGGCGCGTTGCAGCAGGACCCAGGCATGTACATCAATAATGTGATCAACCCGCACATGGACGGCGATATCAACTACGGCCAGAGCCTCGGCGTGGCTGGTCCCTCGCCAGGCCCCTCCTGCGTCGACGTGCAAGCCGCGCAGGAACCAAACCCCACGCCCACCCCCAAGCGACGACGAACCACCAACCCACAATCTGAAGAAAACTTCCAGAGGGCTTTAGAGGCTGTGCGTTTCGGAGGAATAGGTTTCTGTAAGGCTGCTCGAATGTTTGGCGTTAACAATAGGACCTTATGGCTTGAGTATAAGAAGAAAGGATACCCGAATAACAGGCCCAGTATTAAGAGCAGGATCAAGCGCGAACACACGACTCCGCCGCCCGAGCACAAGGAGGAACAGCAACTGCCGGAGCAGCAGATGGCGCTGGTGTGCCCGCAGCATCAGGTGCCGCCCGGGTTCATCGAGTCCAACGCCGCGCACGGCTTCCCCTTGCAGGGCGTGGCGCACAACTCGCCTCTCAACATTTTGGGAGTGAATTTCAACTCAATGCAATAG
Protein Sequence
MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLSADGKQLLAHKVVLSACSTYFQSLFVDNPSPHPIVILKDVTYADLRTMVDFMYCGEVNVTEEQLPKVLDTAKLLKIKGLTEMPDSTSLTRSQGTSAEFQNQGDSMDSQRQSPAASPSNKRRRRRKSSSGSTSLNVVENEQGRADVAAQTVDAITLSSVPQQRRMREYHEIRTIDNSQQVDDTTEQDLNVEQIGLENTPTAIPQGGQWTMMEHSYPRYTNACLGAGALQQDPGMYINNVINPHMDGDINYGQSLGVAGPSPGPSCVDVQAAQEPNPTPTPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEQQLPEQQMALVCPQHQVPPGFIESNAAHGFPLQGVAHNSPLNILGVNFNSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01363243; iTF_01363023; iTF_01361780; iTF_01180418; iTF_01179431; iTF_01179596; iTF_01180251; iTF_00171971; iTF_00171682; iTF_00281507; iTF_00282191; iTF_00282553; iTF_00281056; iTF_01538659; iTF_00450292; iTF_01538903; iTF_00450042; iTF_00050072; iTF_00049825; iTF_01332472; iTF_01332940; iTF_01075300; iTF_01436236; iTF_01435983; iTF_01075633; iTF_00931141; iTF_00931588; iTF_01085061; iTF_01084174; iTF_01084404; iTF_01085528; iTF_00711752; iTF_01064559; iTF_00712058; iTF_01064795; iTF_01063690; iTF_01063882; iTF_01061808; iTF_01062007; iTF_01062957; iTF_01062729; iTF_01532241; iTF_01531889; iTF_01362515; iTF_01362384; iTF_00446358; iTF_00446030; iTF_00447383; iTF_00447042; iTF_00685591; iTF_00685351; iTF_01031256; iTF_01031056; iTF_00302023; iTF_00302310; iTF_00041929; iTF_00041702; iTF_00041027; iTF_00040714; iTF_00043410; iTF_00043700; iTF_00928585; iTF_00928837; iTF_00000238; iTF_00000453; iTF_00851950; iTF_00851691; iTF_00001103; iTF_00001291; iTF_00345743; iTF_00345988; iTF_00809297; iTF_00809030; iTF_01360818; iTF_01197647; iTF_01197910; iTF_01360544; iTF_00018100; iTF_00018290; iTF_00301332; iTF_00301094; iTF_01230452; iTF_01230763; iTF_00621942; iTF_00622105; iTF_01073530; iTF_01073726; iTF_00709110; iTF_00709380; iTF_01377622; iTF_01377393; iTF_00771799; iTF_00772146; iTF_00973911; iTF_00973684; iTF_01285466; iTF_01285686; iTF_00017467; iTF_00017265; iTF_00383547; iTF_00383828; iTF_00794267; iTF_00794794; iTF_00908987; iTF_00908742; iTF_00636195; iTF_00405135; iTF_00404627; iTF_00636629; iTF_01166521; iTF_01166848; iTF_01342139; iTF_01342338; iTF_00850908; iTF_00850546; iTF_01173404; iTF_01173207; iTF_01502012; iTF_01502219; iTF_00707105; iTF_00157130; iTF_00706863; iTF_00157335; iTF_00445341; iTF_00445035; iTF_01151997; iTF_01152301; iTF_01491805; iTF_01492137; iTF_00273534; iTF_00273740; iTF_01534718; iTF_01535060; iTF_00177311; iTF_00177035; iTF_01260031; iTF_01260248; iTF_00274368; iTF_00274545; iTF_00300096; iTF_00300377; iTF_01025955; iTF_01030371; iTF_01030123; iTF_00888401; iTF_01027475; iTF_01029141; iTF_01027222; iTF_01029398; iTF_00888155; iTF_01028187; iTF_01026461; iTF_01028447; iTF_00809984; iTF_00810238;
90% Identity
iTF_00072209;
80% Identity
iTF_01363243; iTF_01363023; iTF_01361780;