Ccur030346.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- lolal_1
- Assembly
- GCA_905475355.1
- Location
- FR997794.1:18197431-18204634[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-16 4.9e-13 49.5 0.0 1 42 266 308 266 311 0.94 2 2 4.1 6.4e+03 -2.0 0.0 29 41 310 323 309 324 0.79
Sequence Information
- Coding Sequence
- ATGAAAGATGTGTCCCTGTTCGTCGACAATCCGTCGCCGCACCCCATCGTGATTCTGAAGGATGTCACGTACGCCGACCTGCGGACTATGGTCGACTTCATGTACTGTGGCGAAGTCAATGTCACAGAGGAACAGCTGCCCAAGGTTTTGGACACAGCGAAATTGCTCAAGATCAAGGGTTTGACAGAGATGCCAGACTCGACCTCACTGACCCGGTCCCAAGGAACATCTGCGGAATTCCAGGGAGATTCCATGGACTCACAGCGGCACTCCCCGCCTGCGTCACCCACAACTAAACGTAAACGACGCAGAAAAAGCTCAACAGGCTCCACATCCCTGAACATGGTTGGTGAGGAGAACCGTTCGGACGTGGGAGCGCAAGCTGTGGACGCCATCACCCTGAGCAGCGTGCCACAGCAACGACGAATGCGCGAGTACCATGAAGTACGGACCATCGATAACGCACAACAGACATCAGAAACGGAAAACATGAATGTGGAGCATAATATGGGACTTGACAACACGCCCACCGGACTACCCCAAGGAGGACAGTGGACCATGATGGAGCACGCATACCCGCGGTACACGAACGCGTGTATCGGCGGTGGGCTTCAGACAGACCCCGGCATGTACATCAACAACGTGATCAACCCGCACATGGACGCGGATATCACCAGCTACGGACAGAACCTGGCCGTTGGCCCTTCGCCCGGCCCCTCCTGCGTGGACGTGCAGCAGACCCCCGAACAGACGCCCCCGGCCGCCCAAAAGCGACGCCGGACCACCAACCCGCAGTCTGAAGAAAACTTCCAGCGTGCCCTCGAAGCGGTCCGCTTCGGCGGCATCGGTTTCTGCAAGGCGGCGCGGATGTTCGGCGTCAACAATCGAACACTGTGGCTCGAATACAAGAAGAAAGGATACCCCAACAACCGGTCGAGTATCAAGAGCCGGATCAAACGCGAGCACACGACGCCGCCACCCGAGCAGAAGGACGAGGCTCCACAGCCGGACCAGCAGATGGCGCTACTGTGCCAGCAGCACCAGGTGCCACCGGGTTTCATTGAGTCGACGCCTCACGGGTTCCCGTTGCAGAACGTGCCGCACAACTCTCCTCTCAATATTCTAGGGGTGAACTTCAACTCGATGCAATAG
- Protein Sequence
- MKDVSLFVDNPSPHPIVILKDVTYADLRTMVDFMYCGEVNVTEEQLPKVLDTAKLLKIKGLTEMPDSTSLTRSQGTSAEFQGDSMDSQRHSPPASPTTKRKRRRKSSTGSTSLNMVGEENRSDVGAQAVDAITLSSVPQQRRMREYHEVRTIDNAQQTSETENMNVEHNMGLDNTPTGLPQGGQWTMMEHAYPRYTNACIGGGLQTDPGMYINNVINPHMDADITSYGQNLAVGPSPGPSCVDVQQTPEQTPPAAQKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRSSIKSRIKREHTTPPPEQKDEAPQPDQQMALLCQQHQVPPGFIESTPHGFPLQNVPHNSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01361512;
- 90% Identity
- iTF_00345988;
- 80% Identity
- iTF_00345988;