Alep006966.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- lolal
- Assembly
- GCA_033675125.1
- Location
- CM066219.1:21818866-21828277[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-16 6.5e-13 49.3 0.0 1 42 317 359 317 362 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAACAGTATAGCCTACGATGGAACAACCACCAGCCGAATTTTATTTCCATGTTCACGACGTTGCTGAACACGCAGACATTGGTCGACGTCACATTGGCTGCGGATGGGAAGCAGTTGTTGGCCCATAAGGTCGTGCTCTCAGCGTGTAGCACTTATTTCCAAAGTCTGTTTGTGGATAACCCGTCGCCCCACCCTATTGTGATCCTTAAAGATGTGACCTACGCTGACCTGCGCACGATGGTTGACTTCATGTACTGTGGAGAGGTCAACGTCACCGAGGAACAGTTGCCTAAGGTGCTGGACACCGCGAAGCTGTTAAAGATCAAGGGCCTCACGGAGATGCCAGACTCCACCTCGTTGACGCGCTCCCAGGGCACGTCGGCAGAGTTCCAGAGTCAGGGCGACTCGCTCGACTCCGCGAGGCAGTCACCAGCTGCCTCACCCTCAAACAAACGCCGGAGGCGCCGAAAGAGTTCAACGGGCTCCACTTCCTTGAACGTGCTTGAGAACGAGCACGGTCGCGCTGACGTGAGCGCGCAGACTGTAGAGGCCATCACGTTAAGCAGCGTGCCACAACAACGACGCATGCGCGAATACCACGAAATTAGGACCATCGATAACTCACAGCAAGTCGATGAAACGACAGACCAGCCTGACAACATGAATGTGGAGCCCATCGCGATGGACAACGCGGCCCCGACAGCCATTGCTCAAGGAGGCCAATGGACGATGATGGAGCACTCGTACCCGCGGTATACGAACGCGTGCATACAGCAGGACCCCGGCATGTATATCAACAACGTGATCAACCCGCACATGGAGGACATGAGCTACGCGCAGGGCATGGGCGTGGCGGGCCCGTCGCCCGGGCCGTCGTGCGCGGACGTGCAGCCGGCcgagcccgcgccgccgcccaaGCGCCGCCGCACCACCAACCCGCAGTCCGAGGAGAACTTCCAGCGCGCGCTCGAGGCCGTGCGCTTCGGCGGCATCGGCTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACCGCACGCTCTGGCTCGAGTACAAGAAGAAGGGCTACCCCAACAACCGGCCGAGCATCAAAAGCAGGATCAAGCGCGAGCACACGACGCCGCCGCCCGAGCACAAGGAGGAGCAGGCGCCGGTGGAGCAGCAGATGGCGCTGCTGTGTCCTCAGCACCAAGCGCCGCCCGCCTTCCTGGAGCCGCCGCACGGCTTCCCGCTGCAGAGCGTGCCGCACAGCTCCCCCCTCAACCTCCTCGGCGTCAACTTCAACTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAADGKQLLAHKVVLSACSTYFQSLFVDNPSPHPIVILKDVTYADLRTMVDFMYCGEVNVTEEQLPKVLDTAKLLKIKGLTEMPDSTSLTRSQGTSAEFQSQGDSLDSARQSPAASPSNKRRRRRKSSTGSTSLNVLENEHGRADVSAQTVEAITLSSVPQQRRMREYHEIRTIDNSQQVDETTDQPDNMNVEPIAMDNAAPTAIAQGGQWTMMEHSYPRYTNACIQQDPGMYINNVINPHMEDMSYAQGMGVAGPSPGPSCADVQPAEPAPPPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEQAPVEQQMALLCPQHQAPPAFLEPPHGFPLQSVPHSSPLNLLGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01361512;
- 90% Identity
- iTF_00177311;
- 80% Identity
- iTF_00177311;