Shsu018699.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000269.1:7676469-7679115[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 6.7e+03 -3.1 0.2 85 105 49 69 32 90 0.54 2 2 3.8e-99 7.5e-95 317.1 12.3 2 218 294 507 293 507 0.91
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCCAGCAACGGAACAATGTTTGGCACCACAACAAGCATAACAAAGCCGGAGGATGAAGGCGCCGCCGCGAGCACCAGTGGCATTCACCTCGAGCAGGAGGAGGATAAGGCGGAGCAAGAACTACAACTGGATGATGAGGATATTGAGCGTCAAATAAAAACATCAATTATTGATGCAAGCAAGGTGCATGCAGCCAAAGCGAAACTTGTGCTGCCCCTGCAACTGCAGCTGGACGATGAGCTTGCGGACTTTGCGCACGAGCCTGTTGGGCTAACGAAGGTGGTTTTTGGACAGGAGGAGGAGGAGGAGGACGACGATGATGATCTGGATGAACAGTTTCTGGAGCTGGAGAACTTTCCTAACAATGAGATTATTGTACTAGGCGATCAAGATCTTAACTCATCGCTTGCCTCCGACAACATATCCGAGGATCCGCTGGCCATAGACGACTTTGGGCAAAAGGAGGCCGACGACGAGGAGGAGGAGGCTGACAGCAGCGGCGACTTGATGTGGCTCAAACTGGACACACCAACTACTATAAATAGCAGCGTTCTTCCCGTCCCAGGCTGCAGAAGCTCTTTGACAGCTTCGACTGCGACAGCAGCCACACCCGTTAAGCCACCCACCAGGCGAAGAGAGGAGGAGCTGCGCAGCGATGGTGGCTCCGATTCGGGTCTGGGCAGTGAAAATGATAGACACAACACAACAACGACATTGGCAAGTGTGCAAAAGCCTCTGCGTTCGAATTTGAAGCGTCGCTTGGATGATGACGCCATGGAGCTGGCCTTGCTGCCCATCTCCAGCTGCTCCAATACACAGAAGCGCCCAAAGCGTAGCATCAATTTTGATAGCGTTAAGATCTACTATTTTCCCCGGCAGCAGGGCTTCGGCTGTGTTCCCACTGCCGGCGGCTGTACGCTGGGCATGGGCGCCCGGCACATTGCCTTCAAGACCTTGACGCTGGCGGAGCACGCATCGGAGCTGCGGCGTGCCCATCGCAGCCAAAACCAGGAGCTGCACCAGCAGCATCAGCAGCAACAACAGCAGCTGCAAGCGCGAGGTTCCAGCAGCGACGACAGCGAGGAGTCCGAAGAGGATTATCTGAGCGAGGGCAGCGGCTCCGATGCGGACGATGGCACCAACGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGACGTGTTCTGCTCAAGGCGGCCGGCGTGCGCAAGATCGATGCCAGCGAGAAGATCGATTGCCGGGACATACGCAACTCGCGCGAAGTGTGCGGCTGCTCTTGCCGCGAATTCTGCGACCCGGAGACATGCGCCTGCAGCCAAGCGGGCATCAAGTGTCAGGTGGATCGCGCCATGTTCCCCTGCGGTTGCACGCGCGAAGCCTGCGGCAACACCGTGGGTCGCGTGGAGTTCAATCCGACGCGGGTGCGCACTCACTACATACACACTGTGATGCGCCTGGACATGGAGCAGCGTCAGAGCCAGGGACAGTCGTCGGCGAACAGCGGCAGCAGCAACGGTTTGGTCTACGGCAGCAGCAGCGTCTCCGGCAACAGCTCTCCAGGCGTCGTCTCACCCTCCGCAGCTGCTGCCGCCTCCGCGCACTGCTTCTTCATGCAGCCGCAGTCGAACTACAGCTCCGGCTATGCCTCGCCAGCTTACACGCCCGAGGCAAGCGTCAGCTTCTACCAACAGCAACAGCCACAGGCGTCACCTGGCTCCAGCGGCACGGCGCAGCAAGCTGGCTATGCCACAATTTATCCACAGCTGGATAGCCTTGATGCTGGCCTATTTGCCAGCGGTAGCAATGCCACGCCCTCCTACGGTGAGCTGCTAACGCCCACGTTCCATCAGACCCTCGGCTATGGCAGCCCTCAGCTCAACTCTTACGGCTTCCATCAACAGACAGCTGCAACTGCTGGAAGCATTGCGTCGCCCGTTGGATTTAGCTCGTGTGCGGTGCCATCGGTGCCGCCATTCGGCATTGCCACAACCACCGCCTCGAATGTGACGCAGTATCAGCATGTGAATGCGTTAGAAACCACCGCCGCCGCCGCCACAATGATTAGCAGCAGCAGCAGCAATAGCAGCATATCCATCACGGCCAGCAGCTGTGCCACTGGCCTGGCACGTCTCGGAGCCGCTGGACCCGTTGACTTCATCAGCCTGAATGCGCCCGTTAACACTTCGTCGCGTTTGTCACAGATCAATGATCTGTTGCAGCACAATCGTAATACCACCGTCGCTTTGGTTGCCGTCTCCGAGGGCTATGCAGCTGTGCGCAACAGCAACAGCAGCACCACCAGCACGAACAATACCAGCACCACCATTGACTCAATTGACACGCCACCCATTGTGGAGGAGGCGCAGCGCAGCTGTATGACCTTTGAGGGGCTGCCACCGCCGCTAGTTAATCCCACGCCAATTGTTGCCGTTCTCGAGCAGCCGCACAAACAGCTACTGGCGGTGTCCACACCGCCGCAGCCACGCCAGCCACTGGATGTCAGCGCCAGTCTGACTGAATCCTTATCGAGAAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTTTSITKPEDEGAAASTSGIHLEQEEDKAEQELQLDDEDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPVGLTKVVFGQEEEEEDDDDDLDEQFLELENFPNNEIIVLGDQDLNSSLASDNISEDPLAIDDFGQKEADDEEEEADSSGDLMWLKLDTPTTINSSVLPVPGCRSSLTASTATAATPVKPPTRRREEELRSDGGSDSGLGSENDRHNTTTTLASVQKPLRSNLKRRLDDDAMELALLPISSCSNTQKRPKRSINFDSVKIYYFPRQQGFGCVPTAGGCTLGMGARHIAFKTLTLAEHASELRRAHRSQNQELHQQHQQQQQQLQARGSSSDDSEESEEDYLSEGSGSDADDGTNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGQSSANSGSSNGLVYGSSSVSGNSSPGVVSPSAAAAASAHCFFMQPQSNYSSGYASPAYTPEASVSFYQQQQPQASPGSSGTAQQAGYATIYPQLDSLDAGLFASGSNATPSYGELLTPTFHQTLGYGSPQLNSYGFHQQTAATAGSIASPVGFSSCAVPSVPPFGIATTTASNVTQYQHVNALETTAAAATMISSSSSNSSISITASSCATGLARLGAAGPVDFISLNAPVNTSSRLSQINDLLQHNRNTTVALVAVSEGYAAVRNSNSSTTSTNNTSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLVNPTPIVAVLEQPHKQLLAVSTPPQPRQPLDVSASLTESLSRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327877; iTF_01320456; iTF_01326381; iTF_01327156; iTF_01324882; iTF_01325650; iTF_01321908; iTF_01324098; iTF_01322631; iTF_01321179;
- 90% Identity
- -
- 80% Identity
- -