Spal005017.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000051.1:5262302-5265047[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.64 1.2e+04 -4.0 0.8 92 100 63 71 35 100 0.44 2 2 4.8e-99 8.8e-95 316.8 12.0 2 216 312 523 311 525 0.90
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACATACATACAAAAAAATGCCAGCAACGGAACAATGTTCGGCACCACAACAAGCATGATTAAGCCGGAGGATGAAAGGGCCGCCGCCACAAGCAGCAGTGGCATGCAACTAGAGCCGGAAGAGGACCTGGAGCAGCAGCAGCGGCTGCCCCTGGAACAGGAAGTGCAAGCTGAAGAACAGCTTCAGCTGGATGATGAGGATATTGAGCGTCAAATAAAAACATCGATAATTGATGCCAGCAAGGTGCATGCTGCAGCCAAAGCGAAACTAGTGCTGCCCCTGCAACTGCAGCTGGACGATGAGCTGGCGGACTTTGCGCATGAACCAATAGCATTAACGAATATTGTTGTGCGAGAGCATGTGGATGACGATGATGATCTGGAAGAACAGTTTCTGGAGCTCGAAAATTTTCCCAACAATGAGATTATTGTATTAAGCGATCAAGATCTAAACTCATCGCTTGCCTCTGACAACATATCCGAGGATCCGCTGGCCATAGATGACTTTGGGCCAAAGGAAGCTGACGACGAGGAAGAGGAAGCTGACAGCAGCGGTGATTTAATGTGGCTCAAACTGGACACACCGACTTCTTTGAATAGCACCAGCAACAGCAGAAGCGTTCTTCCCGTTCCAAGCTGCAGTAGCTCCTTACAAGCTTCGACCACGGCAACAGCTACACCCGTTAAGCCACCCACACGGCGAAGAGAAGAGGAGCTGCGCAGTGATGGTGGCTCCGACTCGGGTCTGGGCAGTGAAAATGATAGACATAACACCACAGCATCAACAACAAGTTTGCAAAAACCACTGCGCTCGAATTTGAAACGTCGCCTCGACGATGATGCCATGGAGCTGGCCTTGCTGCCCACACTCTCAGCCTGCTCCAATACACAGAAGCGGCCAAAGCGAAGCATCAACTTTGATAACGTCAAGATCTATTATTTTCCACGGCAACAGGGCTTCGGCTGTGTGCCCACTACCGGCGGCTGTACACTGGGCATGGGCGCCCGGCATATTGCCTTTAAGACCTTGACATTGGCGGAGCATGCATCCGAATTGAGGCGTGCGCATCGTAGCCAAAATCAGGAGTTGCACCAGCAGCACCAGCAACAACAGCAGCAGCTGCAAGCGCGAGGCTCTAGCAGCGATGATAGCGAGGAGTCCGAAGAGGATTATCTGAGCGAGGGCAGCGGCTCGGATGCCGACGATGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGGCGTGTCTTGCTCAAAGCAGCTGGCGTACGTAAGATCGATGCCAGCGAAAAGATCGATTGCCGGGATATACGCAACTCGCGCGAAGTGTGCGGCTGCTCGTGCCGGGAATTCTGCGATCCGGAGACATGCGCCTGCAGTCAAGCGGGCATCAAGTGTCAGGTGGATCGTGCCATGTTTCCGTGCGGTTGTACGCGCGAAGCTTGTGGCAACACTGTCGGTCGTGTCGAGTTCAATCCGACGCGTGTGCGCACTCACTACATACACACTGTGATGCGCCTGGACATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCTGGTGTCGTATCACCCTCGGCAGCAGCTGGTGCCTCCTCCTCCTCGCATTGCTTCTTCATGCAGCCGCAGTCGAACTATAGCTCCGGCTATGCCTCGCCAGCTTATACGCCCGAAACGAGCGTCAGCTATTATCAGCAACCACAAACGCCTCTGGCAGCACAAGCGGCGGCGGCACCTGGTTCGCCTGGCAACAGTAGCACGGCGCCACAATCCACCTATGCCACAATCTATCCACAGTTGGATAGCCTCGATGCAGGCCTATTTGCCAGCGGCAGCAATGCCACGCCCTCCTATGGTGAGCTGTTAACGCCCACGTTTCATCCAACCCTCAGCTATGGCAGCACTCAGCTCAACTCTTACGGCTCGTATCAGCAGACAACGGCAACATCTGGCGGCATTGCGGTGTCGCCTGTTGGCTATAGCTCATGTGCGGTGCCATCGGTGCCGCCCTTTGGCATTGCCACAACAACCGCCTCGAACGCTACGCAATATCAGCATGTGAATGCATTAGAAACCACCGCCGCCACAATGATAAGGAGCAGCAGCAGCAACAGCAGCAGCAGCATATCCATAACAGCCAGCAGCTGTGCCACGGGGCTACCACGTCTCGGTGGTGCTGGACCCGTTGATTTCATTAGCCTGAATGCGCCCATTAACAGCTCGTCGCGCTTATCACAGATCAATGATCTGTTGCAGCACAATCGTAGTACCACCGCCGCTTTGGTTGCCGTCTCCGAGGGATATGCTGCTGTGCGCAACAGCAGTAGTAGCACCGCTACCAGCACCACGATTGATTCAATTGACACGCCACCCATTGTGGAGGAGGCGCAACGCAGCTGCATGACCTTTGAGGGGCTGCCACCGCCGCTTATAAATCCCACGCCAATTGTTGCCGTTCTCGAGCAGCCGCACAAACAGCTATTGGCTGTGTCCACAACGCCACAGCCGCGCCAGCCACTGGATGTCAATGCCAGTCGGACTGGATCCTTACTGGGGAGCAGCAGCAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTTTSMIKPEDERAAATSSSGMQLEPEEDLEQQQRLPLEQEVQAEEQLQLDDEDIERQIKTSIIDASKVHAAAKAKLVLPLQLQLDDELADFAHEPIALTNIVVREHVDDDDDLEEQFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGPKEADDEEEEADSSGDLMWLKLDTPTSLNSTSNSRSVLPVPSCSSSLQASTTATATPVKPPTRRREEELRSDGGSDSGLGSENDRHNTTASTTSLQKPLRSNLKRRLDDDAMELALLPTLSACSNTQKRPKRSINFDNVKIYYFPRQQGFGCVPTTGGCTLGMGARHIAFKTLTLAEHASELRRAHRSQNQELHQQHQQQQQQLQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVVSPSAAAGASSSSHCFFMQPQSNYSSGYASPAYTPETSVSYYQQPQTPLAAQAAAAPGSPGNSSTAPQSTYATIYPQLDSLDAGLFASGSNATPSYGELLTPTFHPTLSYGSTQLNSYGSYQQTTATSGGIAVSPVGYSSCAVPSVPPFGIATTTASNATQYQHVNALETTAATMIRSSSSNSSSSISITASSCATGLPRLGGAGPVDFISLNAPINSSSRLSQINDLLQHNRSTTAALVAVSEGYAAVRNSSSSTATSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLAVSTTPQPRQPLDVNASRTGSLLGSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- -
- 80% Identity
- -