Scal005552.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000310.1:989563-992300[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.31 5.1e+03 -3.0 0.3 80 101 50 70 30 98 0.48 2 5 0.17 2.8e+03 -2.2 0.7 78 108 152 182 118 205 0.71 3 5 0.12 1.9e+03 -1.6 0.0 27 64 239 279 236 298 0.71 4 5 1.9e-99 3.1e-95 318.1 11.4 2 217 302 514 301 515 0.91 5 5 0.46 7.5e+03 -3.5 0.2 77 98 794 812 766 831 0.46
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATTAAGAAGATTTTCACGTACATTCAGAAAAATGCCAGCAACGGAACAATGTTTGGCACCACAACAAGCATACTGAAGCTGGAGGATGAAGGCGCCGCTGcaagcagcagtggcaatAACCTGGAGCAGGAAGATCAGCTGCAGCGGGAAGTGGAGGCGGAACAACAACTCCAGCCGGATGACGAGGATATTGAGCgtcaaataaaaacatcaatCATTGATGCAAGCAAGGTTCatgcagccaaagcaaaacttgCGCTTCccctgcaactgcagctggacGATGAGCTGGCTGATTTTGCGGATGAACCTATAGTATTGTCAAATGGTATTGTAAGAGAGGAGGaggacgacgatgatgatctGGAAGAACAGTTTCTGGAACTAGAGAATTTTCCCAATAATGAGATAATTGTACTAAGCCATCAAGATCTTAACTCATCGCTTGCCTCTGATAACATATCTGAGGATCCGCTGGCCATAGATGACTTTAGGCAGAAAGAGGctgacgaggaggaggaggaggctgACAGCAGCGGTGACCTAATGTGGCTTAAACTGGATACGCCAACTACTATCagaaccagcagcagcgttcTTCCCGTTTCaggctgcagcagctcttTACAAGCttcgacaacagcagctacaccCGCTAAGCCACCGGCCAGGCGAAGGGAAGAGGAGCTGCGCAGCGATGGTGGCTCCGATTCTGGCTTGGGCAGTGAAAATGATAGACATaataccacaacaacaacaacaattgcaacaacagcaagtttGCAAAAGCCACTGCGCTCGAATTTAAAGCGTCGTCTTGTTGACGATGCCATGGAGCTGGCTTTGCTGCCCATCTCAAGCTGCTCTAATACACAAAAGCGCCCAAAACGTAGCATCAATTTTGACCACGTTAAAATCTATTATTTTCCACGGCAACAAGGCTTCAGCTGTGTGCCCACGGCCGGTGGCTGCACGCTTGGCATGGGCGCCCGGCATATTGCCTTTAAGACCTTGACATTGGCGGAGCATGCCTCCGAGTTGCGGCGCGCACATCGCAGTCAAAATCAGGAGcttcatcagcagcatcagcaacaagcgcagcagctgcaagcaCGCGGTTCAAGTAGCGATGATAGCGAAGAATCTGAAGAGGATTATTTGAGCGAAGGCAGCGGCTCCGATGCTGACGATGGCTCCAATGGCTTTCTGCAGCCGGTGACGCCCAAGCAGCGACGTGTTCTGCTTAAAGCAGCCGGCGTGCGCAAGATCGATGCCAGCGAGAAGATTGATTGTCGGGATATACGCAACTCACGCGAAGTGTGCGGCTGCTCGTGCCGCGAATTCTGCGATCCGGAGACATGCGCTTGCAGCCAAGCGGGCATCAAGTGTCAAGTAGATCGTGCCATGTTCCCCTGCGGTTGCACTCGCGAAGCTTGTGGCAATACTGTTGGTCGTGTGGAGTTCAATCCGACGCGAGTGCGCACCCACTACATACACACTGTGATGCGTCTGGACATGGAGCTGCGTCAGAGCCAGGGACAGTCGTCggcgaacagcagcagcagcggcaatggtTTGGTTTACGGCAGCAGCGTGCCTGGCAACAGCACTTCCGGCACTGTATCACCCTCTGCTGCATCTGGCGCCTCCTCCACCCACTGCTTCTTCATGCAACCTCAATCGAACTATAGCTCCGGCTATGCCTCGCCAGCTTACACGCCCGAGACGAGTGTAAGCTTctaccagcagcaacaacaaacgcctTTGGCAGCACATACATCACCGGTTGccgcaggcaacagcagcacggTGCAGCAATCCAGCTATGCCACAATCTATCCGCAGTTGGATAGTCTTGATGCTGGCCTTTTCGCCACCGGCAGCAATGCCACGCCCTCCTACGGTGAGCTCTTAACGCCCACGTTTCACCAGTCCCTCAGCTATGGCAGCACTCAGCTCAACTCTTACGGCTCGTATCAGCAGACAACGGCTACAGCTGGTGGCATTGCGACGTCGCCTGTTGGTTACAGCTCGTGTGCGGTGCCATCGGTGCCGCCATTTGGCAATGCCACAACCACCGCCTCGAATGCGACACAATATCAGCATGTGAATGCATTAGAAACCACCGCCGCCACATTgataaacaacagcagcagcagaagcataTCCATTACGGCTAGCAGCTGTGCTACTGGCCTGGCACGTCTCGGTGGCGCTGGACCTGTAGACTTTATCAGTCTGAATGCGCCCATTAGCAGTTCGTCGCGTTTGTCGCAGATCAATGATCTGTTGCAGCATAATCGTAATACCACCGCCGCTTTGGTTGCCGTCTCCGAGGGCTATGCCGCTGTgcgcaatagcaatagcagcagcagcagcagcagtagcacaaATACCAGCacgaacaacacaaacagcaccACCATTGACTCAATTGACACGCCACCCATTGTGGAGGAGGCGCAGCGTAGCTGCATGACCTTTGAGGGGCTGCCACCGCCGCTTATAAATCCCACGCCAATTGTCGCCGTTCTTGAGCAGCCGCACAAACAACTATTGGCTGTGTCCACAACGCCACAGCCACGCCAGCCACTAGATGTCAGCGCCAGTCGTACTGAAACGCTATCGggaacgagcagcagcagcaactaa
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTTTSILKLEDEGAAASSSGNNLEQEDQLQREVEAEQQLQPDDEDIERQIKTSIIDASKVHAAKAKLALPLQLQLDDELADFADEPIVLSNGIVREEEDDDDDLEEQFLELENFPNNEIIVLSHQDLNSSLASDNISEDPLAIDDFRQKEADEEEEEADSSGDLMWLKLDTPTTIRTSSSVLPVSGCSSSLQASTTAATPAKPPARRREEELRSDGGSDSGLGSENDRHNTTTTTTIATTASLQKPLRSNLKRRLVDDAMELALLPISSCSNTQKRPKRSINFDHVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTLTLAEHASELRRAHRSQNQELHQQHQQQAQQLQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMELRQSQGQSSANSSSSGNGLVYGSSVPGNSTSGTVSPSAASGASSTHCFFMQPQSNYSSGYASPAYTPETSVSFYQQQQQTPLAAHTSPVAAGNSSTVQQSSYATIYPQLDSLDAGLFATGSNATPSYGELLTPTFHQSLSYGSTQLNSYGSYQQTTATAGGIATSPVGYSSCAVPSVPPFGNATTTASNATQYQHVNALETTAATLINNSSSRSISITASSCATGLARLGGAGPVDFISLNAPISSSSRLSQINDLLQHNRNTTAALVAVSEGYAAVRNSNSSSSSSSSTNTSTNNTNSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLAVSTTPQPRQPLDVSASRTETLSGTSSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- -
- 80% Identity
- -