Sgra013664.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000002.1:9823832-9826520[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 1.5e+04 -4.7 0.9 81 108 152 179 143 186 0.65 2 2 2e-99 3.1e-95 318.0 13.8 2 218 299 512 298 512 0.92
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCCAGCAATGGAACAATGTTTGGCACAACAACAAGCATAATAAAGCCGGAGCTTGATGGCGCCGCCTCAAGCAGCAGTGGTGGCAGCCAACTGGCGCCGGGGGATGATCTGGAGGTAGAAACGGAGAAACAGCAACAACAACTGGACGATGAAGATATTGAGCGTCAAATAAAAACATCAATCATTGATGCCAGCAAGGTGCATGCAGCCAAAGCGAAACTTGTGCTGCCCCTGCAACTGCAGCTGGACGATGAGCTGGCGGACTTTGCCCATGAGCCAATAGGGCTTGTTGTGGGCGAGGAGGGGGACGAAGACGATGACCTAGAAGAACAGTTTCTGGAACTAGAGAATTTTCCCAACAATGAAATCATAGTGCTAAGCGATCAGGATCTAAACTCATCACTTGCCTCCGACAACATATCCGAGGATCCGCTGGCCATCGATGACTTTGGCCAAAAGGAGGCTGACGACGAAGAGGAGGAGGCTGACAGCAGCGGCGACTTGATGTGGCTCAAACTCGACACGCCAACCACTGCTAATAGCAACACCAGTAGCAGCAGCAGCGTTCTTCCCGTTCCCGGCTGCAGTAGCTCTTTGATAGCTGCGACTGCGACAGCAACTACACCCGTTAGGCCACCCACGCGGCGAAGAGAGGAGGAGCTGCGCAGCGATGGTGGCTCCGATTCGGGCCTGGGCAGTGAGAATGATAGACATAACATCACAACAACAACAACAAGCTTGCATAAGCCGCTGCGCTCAAATTTGAAACGTCGGCTGGATGATGATGCCATGGAGCTGGCATTGCTGCCCATCTCAAGCTGCTCCAACACACATAAGCGACCGAAGCGTAGCATCAACTTTGATAACGTTAAGATCTACTATTTTCCACGGCAACAGGGCTTCAGCTGTGTGCCCACTGCCGGCGGCTGTACCCTGGGCATGGGTGCCCGGCATATTGCCTTCAAGACCATGACGTTGGCCGAGCATGCATCCGAACTGCGGCGTGCACATCGTAGCCAAAATCAAGAGCTCCATCAGCAACATCACCAACAACAACAACAGCAGCAAGCGCGAGGCTCCAGCAGCGATGACAGCGAGGAATCCGAAGAGGATTATCTGAGCGAGGGCAGCGGCTCCGATGCTGACGACGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGGCGTGTCCTGCTCAAAGCAGCTGGCGTGCGCAAGATCGATGCCAGCGAGAAGATCGATTGCCGGGACATACGCAACTCGCGCGAAGTGTGCGGCTGCTCTTGTCGCGATTTCTGCGATCCGGAGACATGCGCCTGCAGCCAGGCGGGCATCAAATGCCAAGTGGATCGCGCCATGTTCCCCTGCGGCTGTTCGCGTGAAGCTTGCGGCAACACTGTCGGTCGTGTCGAGTTCAATCCGACGCGGGTGCGCACTCACTACATACACACTGTGATGCGTCTGGACATGGAGCAGCGTCAGAGCCAGGGGCAATCGTCGGCGAACAGCAGCAATGGATTGGTCTACGGCAGCAGCGTCTCGGGCAGCAGCGCTTCGGGCGTCGTATCACCTTCTGCCTCATCAGGCGCCTCCTCCACACACTGCTTCTTCATGCAACCGCAGTCGAACTACAGCTCTGGCTATGCCTCGCCAGCGTACACGCCCGAGACGAGCGTCAGCTACTATCAGCAACATCAACAAACGCCTCTGGGTGCACAGACTCCACCTGGTGCCACAGGCAACAGCAGCACAACGCAGCAGCAGTCTAGCTATGCCACAATCTATCCACAGTTGGACAGCCTTGATGCAGGCCTATTTACCACAGGTAGCAATGCCACGCCCTCCTACGGTGAGCTGTTAACGCCCACGTTTCATCAGACCCTCAGCTATGGCAGCACTCAGCTCAACTCTTACGGCTCCTATCAGCAGACAGCGGCAGCTAATGGAGGCATTGCGTCGCCTGTTGGTTACAGCTCGTGTGCGGTGCCTTCGGTGCCGCCATTTGGCATTGCCACAACAACCGCCTCGAATGCTACGCAATATCAGCACGTGAATGTGCTAGAAACGACCGCCGCCACAATGATTAGAAGCAGCAACAGCAGCATATCTTTAACGGCCAGCAGCTGTGCCACCACCACGGGCCTGGCGCGACTCGGTGGCCCTGGACCTGTTGATTTCATTAGCTTGAATGCGCCCATTAACAGCTCGTCGCGTTTGTCGCAGATCAATGATCTGTTGCAACACAATCGTAATACCACCGCCGCTTTGGTTGCCGTCTCCGAGGGCTATGCCGCTGTGCGCAGCAGCAGTAGCACCACCACCACGAACAACACCAGCACCACCATCGATTCAATTGACACGCCGCCCATTGTCGAGGAGGCGCAGCGCAGTTGCATGACCTTTGAGGGGTTGCCACCGCCGCTAATAAATCCCACACCAATTGTCGCTGTTCTCGAGCAGCCGCACAAACAGCTACTGGATGTGTCCACAGCGCCGCATCCACGCCAGCCACTGGACGTCAGCGCCAGTCTGACCGAGTCCTTATCGAGCAGAAGCAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTTTSIIKPELDGAASSSSGGSQLAPGDDLEVETEKQQQQLDDEDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPIGLVVGEEGDEDDDLEEQFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGQKEADDEEEEADSSGDLMWLKLDTPTTANSNTSSSSSVLPVPGCSSSLIAATATATTPVRPPTRRREEELRSDGGSDSGLGSENDRHNITTTTTSLHKPLRSNLKRRLDDDAMELALLPISSCSNTHKRPKRSINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQELHQQHHQQQQQQQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCRDFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGQSSANSSNGLVYGSSVSGSSASGVVSPSASSGASSTHCFFMQPQSNYSSGYASPAYTPETSVSYYQQHQQTPLGAQTPPGATGNSSTTQQQSSYATIYPQLDSLDAGLFTTGSNATPSYGELLTPTFHQTLSYGSTQLNSYGSYQQTAAANGGIASPVGYSSCAVPSVPPFGIATTTASNATQYQHVNVLETTAATMIRSSNSSISLTASSCATTTGLARLGGPGPVDFISLNAPINSSSRLSQINDLLQHNRNTTAALVAVSEGYAAVRSSSSTTTTNNTSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLDVSTAPHPRQPLDVSASLTESLSSRSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- iTF_01324098;
- 80% Identity
- -