Sred010965.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010001005.1:984335-987204[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.032 5.6e+02 0.2 1.3 67 104 51 86 35 150 0.60 2 3 0.86 1.5e+04 -4.4 0.8 80 108 169 197 157 204 0.67 3 3 1.3e-99 2.2e-95 318.6 13.6 2 217 321 536 320 537 0.93
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCCAGCAACGGAACAATGTTTGGCACCGCAACTAGCATAATAAAGCCTGAGGATGGTGGGACAGCCGCGAcaagcagcagtggcagccaACTGGCGCAGGAAgaggagctgcagcagcaacagcagcggctgcCACTGAAGCAGGAGCTGGaggcagaacaacaacaacaacagctccagCTGGATGATGAGGATATTGAGCgtcaaataaaaacatcaatTATTGATGCAAGCAAGGTGCATGCAGCCAAAGCGAAACTTGTGCTGCccctgcaactgcagctggaCGATGAGCTGGCGGACTTTGCCCATGAACCTATAGGAATGTCGAATGTTGATGCGCGACGAGAGGACgtcgatgacgatgatgatgatctgGAAGCACAGTTTCTGGAGCTAGAGAATTTTCCCAACAATGAGATAATTGTACTAAGCGATCAAGATCTAAACTCATCGCTTGCCTCTGACAACATATCCGAGGATCCGCTTGCCATAGATGACTTTGGACAAAAGGAAGCTGAcgacgaggaggaggaagcTGACAGCAGCGGTGACTTGATGTGGCTTAAACTGGACACGCCAACTACTGTAAATAGCaccggcaacagcagcagcagcgttctAACCGTTCCAGGCTGCAGTAGCTCTTTACAAGCTTCGACTACGGCAACAGCCACACCCGTAAAGCCACCCACACGGCGAAGAGAAGAGGAGCTGCGCAGTGATGGTGGCTCCGATTCGGGCCTGGGCAGCGAAAATGATAGACAtaacaccacaacaacagcaacagcaacaacaacaagtttacAAAAGCCTCTGCGCTCGAATTTAAAGCGTCGTATTGATGATGATACCATGGAGCTGGCCTTGCTGCCCATCTCAGCCTGCGCCAATAGCCAGAAGCGCCCCAAGCGAAGCATCaattttgacaatgttaagATCTACTATTTTCCACGGCAACAGGGCTTCAGCTGTGTGCCCACGGCCGGCGGCTGCACGCTGGGCATGGGCGCCAGGCACATTGCCTTCAAGACCATGACACTGGCAGAGCATGCTTCCGAACTGCGGCGCGCACATCGTAGCCAGAATCAggagttgcagcagcagcaccagcaccagcaacaacaacagcagcagctgcaagtgCGAGGCTCCAGCAGCGATGATAGCGAGGAATCCGAAGAGGATTATCTGAGTGAGGGCAGTGGCTCCGATGCCGACGATGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGACGTGTCCTGCTCAAGGCAGCCGGCGTGCGCAAGATCGATGCCAGCGAGAAGATCGATTGCCGGGATATACGCAACTCGCGCGAAGTGTGCGGCTGCTCGTGCCGGGAATTCTGCGATCCGGAGACATGCGCCTGCAGTCAAGCAGGCATCAAGTGTCAAGTGGATCGCGCCATGTTTCCGTGCGGCTGCACGCGCGAAGCCTGTGGCAACAATGTCGGCCGTGTGGAGTTCAATCCGACGCGTGTGCGCACACACTACATACACACTGTGATGCGCCTGGACATGGAGCTGCGACAGAGCCAGGGACAATCGTCGGCGAACATAGGCAACAGCAATGGCTTGGTCTACGGCAGCAGCGTCTCTGGCAACAGCACTTCTGGCGCCGTGTCACCCTCTGCAAATGCTGGCGCCTCCTCCTCCCATTGCTTCTTCATGCAGCCGCAGTCAAACTACAGCTCCGGCTATGCCTCGCCAGCTTACACGCCCGAAACGAGCGTCAGCTattaccagcaacaacaaacgcctCTGGCAGCGCAGACGTCACCTGGTTCtacaggcaacagcagcacggCGCAGCAATCCAGCTATGCCACAATCTATCCACAGCTGGATAGCCTTGATGCAGGCCTGTTTGCCAGTGGTAGCAATGCTACCCCCTCCTACGGTGAGCTGCTAACGCCCACGTTTCATCAGACCCTTAGCTATGGCAGCCCTCAGCTCAACTCTTACGGCTCGTATCAGCAGGCAACTGCAACTTCTGGTGGCATTGCGGTCTCCCCGGTTGGTTATAGCTCGTGTGCGGTGCCATCGGTGCCCCCATTTGGCAATGCCACAACCACCGCCTCGAATGCTACGCAATATCAGCATGTGAATGCATTAGAAACCACTGCCGCCACAATGAttggtagcagcagcaacagcagcagcatatcCATAACAGCCAGCAGCTGTGCCACTGGCCTAGCACGACTCGGTGGCGCTGGATCCGTTGATTTCATCAGCCTGAATGCGCCCATCAGTAGCTCGTCGCGTTTGTCACAGATCAATGATCTGCTGCAGCACAATCGTAATACCACCGCCGCTTTGGTTGCCGTCTCCGAGGGCTATGCCGCTGTgcgtagcagcagcagcagcagcagcagtagaacCACCACCAGCCTAAACAACACCCACAGCACCACCATCGATTCAATTGACACTCCACCCATTGTGGAGGAGGCGCAGCGCAGCTGCATGACCTTTGAGGGGCTGCCACCGCCGCTTATAAATCCAACGCCAATTGTTGCCGTTCTCGAGCAGCCGCACAAACAGCTATTGGCTGTGTCCACAACGCCGCAGCCGCGCCAGCCACTGGACGTCAGCGCCAGTCGGTCTGAATCCTTATtgggaagcagcagcaactga
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTATSIIKPEDGGTAATSSSGSQLAQEEELQQQQQRLPLKQELEAEQQQQQLQLDDEDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPIGMSNVDARREDVDDDDDDLEAQFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGQKEADDEEEEADSSGDLMWLKLDTPTTVNSTGNSSSSVLTVPGCSSSLQASTTATATPVKPPTRRREEELRSDGGSDSGLGSENDRHNTTTTATATTTSLQKPLRSNLKRRIDDDTMELALLPISACANSQKRPKRSINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQELQQQHQHQQQQQQQLQVRGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNNVGRVEFNPTRVRTHYIHTVMRLDMELRQSQGQSSANIGNSNGLVYGSSVSGNSTSGAVSPSANAGASSSHCFFMQPQSNYSSGYASPAYTPETSVSYYQQQQTPLAAQTSPGSTGNSSTAQQSSYATIYPQLDSLDAGLFASGSNATPSYGELLTPTFHQTLSYGSPQLNSYGSYQQATATSGGIAVSPVGYSSCAVPSVPPFGNATTTASNATQYQHVNALETTAATMIGSSSNSSSISITASSCATGLARLGGAGSVDFISLNAPISSSSRLSQINDLLQHNRNTTAALVAVSEGYAAVRSSSSSSSSRTTTSLNNTHSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLAVSTTPQPRQPLDVSASRSESLLGSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- iTF_01321179;
- 80% Identity
- -